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Lag0025110 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025110
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr10:8630861..8631629
RNA-Seq ExpressionLag0025110
SyntenyLag0025110
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583907.1 hypothetical protein SDJN03_19839, partial [Cucurbita argyrosperma subsp. sororia]1.4e-8776.05Show/hide
Query:  MQPPPP----SLHSNFFSSLKQVEKRLKLDHSSQRDALHPP------PLPVETNSSLSASAEESLSSPMYLHLPLTNTSSALQESSEPPLQFLSNSSQSP
        M PPPP    SLHS+FFSSLKQVEKRLKLDH SQRDAL PP       LPVE  S  S+S EESLS+PMYLHLP TNT+S+LQESSEPP +FLSNSS   
Subjt:  MQPPPP----SLHSNFFSSLKQVEKRLKLDHSSQRDALHPP------PLPVETNSSLSASAEESLSSPMYLHLPLTNTSSALQESSEPPLQFLSNSSQSP

Query:  LSPQKSVSNNPNPIDRGENPPADDIQRLIQLLGLEDSCDEQELGAKSGCNGCEGCESGFYSKIAGLKGPKCGKEVERLDGWINYFLN--GDEERLEPLRL
            KS SN+PN ID G N P DDIQRL+QLLGL DS +EQELGA+SGCNGCEGCESGFYSKI GLKGPKCGKEVERL+GWI Y  N  G+ ERLEPLRL
Subjt:  LSPQKSVSNNPNPIDRGENPPADDIQRLIQLLGLEDSCDEQELGAKSGCNGCEGCESGFYSKIAGLKGPKCGKEVERLDGWINYFLN--GDEERLEPLRL

Query:  AYLLMGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA
        AYLLMGKAVFASNG D CLEGLEFPSTVEDFLLNDPPA
Subjt:  AYLLMGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA

KGN65550.1 hypothetical protein Csa_019856 [Cucumis sativus]2.2e-9380.18Show/hide
Query:  PPPPSLHSNFFSSLKQVEKRLKLDHSSQRDALH-PPPLPVETNSSLSASAEESLSSPMYLHLPLTNTSSALQESSEPPLQFLSNSSQSPLSPQKSVSNNP
        PP  SLHSNFFSSLKQVEKRLKLDHSSQRD LH PPPLPV TNS  S++ E+SLS+PMYLH P TNTSS LQESS+ PL+FLS+SSQSP S  KS SN P
Subjt:  PPPPSLHSNFFSSLKQVEKRLKLDHSSQRDALH-PPPLPVETNSSLSASAEESLSSPMYLHLPLTNTSSALQESSEPPLQFLSNSSQSPLSPQKSVSNNP

Query:  NPIDRGENPPADDIQRLIQLLGLEDSCDEQELGAKSGCNGCEGCESGFYSKIAGLKGPKCGKEVERLDGWINYFLNG--DEERLEPLRLAYLLMGKAVFA
         PIDRG+N   DDIQRLIQLLGLEDSCDE+E GAK+GCNGCEGCESGFYSKI GLKGPKC KEVERL+GWI +F NG  +E+RLEPLRLAYLL+GKAVFA
Subjt:  NPIDRGENPPADDIQRLIQLLGLEDSCDEQELGAKSGCNGCEGCESGFYSKIAGLKGPKCGKEVERLDGWINYFLNG--DEERLEPLRLAYLLMGKAVFA

Query:  SNGGDGCLEGLEFPSTVEDFLLNDPPA
        SN  DGCLEGLEFPSTVEDFLLNDPPA
Subjt:  SNGGDGCLEGLEFPSTVEDFLLNDPPA

XP_004147438.2 uncharacterized protein LOC101217056 [Cucumis sativus]2.2e-9380.18Show/hide
Query:  PPPPSLHSNFFSSLKQVEKRLKLDHSSQRDALH-PPPLPVETNSSLSASAEESLSSPMYLHLPLTNTSSALQESSEPPLQFLSNSSQSPLSPQKSVSNNP
        PP  SLHSNFFSSLKQVEKRLKLDHSSQRD LH PPPLPV TNS  S++ E+SLS+PMYLH P TNTSS LQESS+ PL+FLS+SSQSP S  KS SN P
Subjt:  PPPPSLHSNFFSSLKQVEKRLKLDHSSQRDALH-PPPLPVETNSSLSASAEESLSSPMYLHLPLTNTSSALQESSEPPLQFLSNSSQSPLSPQKSVSNNP

Query:  NPIDRGENPPADDIQRLIQLLGLEDSCDEQELGAKSGCNGCEGCESGFYSKIAGLKGPKCGKEVERLDGWINYFLNG--DEERLEPLRLAYLLMGKAVFA
         PIDRG+N   DDIQRLIQLLGLEDSCDE+E GAK+GCNGCEGCESGFYSKI GLKGPKC KEVERL+GWI +F NG  +E+RLEPLRLAYLL+GKAVFA
Subjt:  NPIDRGENPPADDIQRLIQLLGLEDSCDEQELGAKSGCNGCEGCESGFYSKIAGLKGPKCGKEVERLDGWINYFLNG--DEERLEPLRLAYLLMGKAVFA

Query:  SNGGDGCLEGLEFPSTVEDFLLNDPPA
        SN  DGCLEGLEFPSTVEDFLLNDPPA
Subjt:  SNGGDGCLEGLEFPSTVEDFLLNDPPA

XP_008444181.1 PREDICTED: uncharacterized protein LOC103487596 [Cucumis melo]2.5e-9478.63Show/hide
Query:  MQPPPP-----SLHSNFFSSLKQVEKRLKLDHSSQRDALH-PPPLPVETNSSLSASAEESLSSPMYLHLPLTNTSSALQESSEPPLQFLSNSSQSPLSPQ
        MQPPPP     SLHS+FFSSLKQVEKRLKLDHSSQRD LH PPP+PV+TN+S S++ E+ LS+PMYLH P TNTSS LQESS+PPL+FLSN S SP S  
Subjt:  MQPPPP-----SLHSNFFSSLKQVEKRLKLDHSSQRDALH-PPPLPVETNSSLSASAEESLSSPMYLHLPLTNTSSALQESSEPPLQFLSNSSQSPLSPQ

Query:  KSVSNNPNPIDRGENPPADDIQRLIQLLGLEDSCDEQELGAKSGCNGCEGCESGFYSKIAGLKGPKCGKEVERLDGWINYFLN--GDEERLEPLRLAYLL
        KSVSN PN IDRG+N   DDIQRLIQLLGLEDSCDE+ELG K GCNGCEGCESGFYSKI GLKGPKC KEVERL+GWI +F N  G+E+RLEPLRLAYLL
Subjt:  KSVSNNPNPIDRGENPPADDIQRLIQLLGLEDSCDEQELGAKSGCNGCEGCESGFYSKIAGLKGPKCGKEVERLDGWINYFLN--GDEERLEPLRLAYLL

Query:  MGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA
        +GKAVFASNG DGCL+GLEFPSTVEDFLLNDPPA
Subjt:  MGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA

XP_038895328.1 uncharacterized protein LOC120083579 [Benincasa hispida]6.3e-9380Show/hide
Query:  QPPPP--SLHSNFFSSLKQVEKRLKLDHSSQRDALHPPP-LPVETNSSLSASAEESLSSPMYLHLPLTNTSSALQESSEPPLQFLSNSSQSPLSPQKSVS
        QPPPP  SLHSNFFSSLKQVEKRLKLDH SQRD LHPPP  PVETNS  S+S E+SLS+PMYLH P TNT SALQESSEPPL+FLSNSSQSP S  KS S
Subjt:  QPPPP--SLHSNFFSSLKQVEKRLKLDHSSQRDALHPPP-LPVETNSSLSASAEESLSSPMYLHLPLTNTSSALQESSEPPLQFLSNSSQSPLSPQKSVS

Query:  NNPNPIDRGENPPADDIQRLIQLLGLEDSCDEQELGAKSGCNGCEGCESGFYSKIAGLKGPKCGKEVERLDGWINYFLN--GDEERLEPLRLAYLLMGKA
        N    IDRG+N    DIQRLIQLLGL +SCDE ELGAK+GCNGCEGCESGFYSKI GLKGPKC KEVERL+GWI +F N  G+EERLEPLRLAYLL GK+
Subjt:  NNPNPIDRGENPPADDIQRLIQLLGLEDSCDEQELGAKSGCNGCEGCESGFYSKIAGLKGPKCGKEVERLDGWINYFLN--GDEERLEPLRLAYLLMGKA

Query:  VFASNGGDGCLEGLEFPSTVEDFLLNDPPA
        VFASNG DGCLEG+EFPSTVEDFLLNDPPA
Subjt:  VFASNGGDGCLEGLEFPSTVEDFLLNDPPA

TrEMBL top hitse value%identityAlignment
A0A0A0LUG6 Uncharacterized protein1.0e-9380.18Show/hide
Query:  PPPPSLHSNFFSSLKQVEKRLKLDHSSQRDALH-PPPLPVETNSSLSASAEESLSSPMYLHLPLTNTSSALQESSEPPLQFLSNSSQSPLSPQKSVSNNP
        PP  SLHSNFFSSLKQVEKRLKLDHSSQRD LH PPPLPV TNS  S++ E+SLS+PMYLH P TNTSS LQESS+ PL+FLS+SSQSP S  KS SN P
Subjt:  PPPPSLHSNFFSSLKQVEKRLKLDHSSQRDALH-PPPLPVETNSSLSASAEESLSSPMYLHLPLTNTSSALQESSEPPLQFLSNSSQSPLSPQKSVSNNP

Query:  NPIDRGENPPADDIQRLIQLLGLEDSCDEQELGAKSGCNGCEGCESGFYSKIAGLKGPKCGKEVERLDGWINYFLNG--DEERLEPLRLAYLLMGKAVFA
         PIDRG+N   DDIQRLIQLLGLEDSCDE+E GAK+GCNGCEGCESGFYSKI GLKGPKC KEVERL+GWI +F NG  +E+RLEPLRLAYLL+GKAVFA
Subjt:  NPIDRGENPPADDIQRLIQLLGLEDSCDEQELGAKSGCNGCEGCESGFYSKIAGLKGPKCGKEVERLDGWINYFLNG--DEERLEPLRLAYLLMGKAVFA

Query:  SNGGDGCLEGLEFPSTVEDFLLNDPPA
        SN  DGCLEGLEFPSTVEDFLLNDPPA
Subjt:  SNGGDGCLEGLEFPSTVEDFLLNDPPA

A0A1S3B9V1 uncharacterized protein LOC1034875961.2e-9478.63Show/hide
Query:  MQPPPP-----SLHSNFFSSLKQVEKRLKLDHSSQRDALH-PPPLPVETNSSLSASAEESLSSPMYLHLPLTNTSSALQESSEPPLQFLSNSSQSPLSPQ
        MQPPPP     SLHS+FFSSLKQVEKRLKLDHSSQRD LH PPP+PV+TN+S S++ E+ LS+PMYLH P TNTSS LQESS+PPL+FLSN S SP S  
Subjt:  MQPPPP-----SLHSNFFSSLKQVEKRLKLDHSSQRDALH-PPPLPVETNSSLSASAEESLSSPMYLHLPLTNTSSALQESSEPPLQFLSNSSQSPLSPQ

Query:  KSVSNNPNPIDRGENPPADDIQRLIQLLGLEDSCDEQELGAKSGCNGCEGCESGFYSKIAGLKGPKCGKEVERLDGWINYFLN--GDEERLEPLRLAYLL
        KSVSN PN IDRG+N   DDIQRLIQLLGLEDSCDE+ELG K GCNGCEGCESGFYSKI GLKGPKC KEVERL+GWI +F N  G+E+RLEPLRLAYLL
Subjt:  KSVSNNPNPIDRGENPPADDIQRLIQLLGLEDSCDEQELGAKSGCNGCEGCESGFYSKIAGLKGPKCGKEVERLDGWINYFLN--GDEERLEPLRLAYLL

Query:  MGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA
        +GKAVFASNG DGCL+GLEFPSTVEDFLLNDPPA
Subjt:  MGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA

A0A5A7UHE6 Uncharacterized protein1.2e-9478.63Show/hide
Query:  MQPPPP-----SLHSNFFSSLKQVEKRLKLDHSSQRDALH-PPPLPVETNSSLSASAEESLSSPMYLHLPLTNTSSALQESSEPPLQFLSNSSQSPLSPQ
        MQPPPP     SLHS+FFSSLKQVEKRLKLDHSSQRD LH PPP+PV+TN+S S++ E+ LS+PMYLH P TNTSS LQESS+PPL+FLSN S SP S  
Subjt:  MQPPPP-----SLHSNFFSSLKQVEKRLKLDHSSQRDALH-PPPLPVETNSSLSASAEESLSSPMYLHLPLTNTSSALQESSEPPLQFLSNSSQSPLSPQ

Query:  KSVSNNPNPIDRGENPPADDIQRLIQLLGLEDSCDEQELGAKSGCNGCEGCESGFYSKIAGLKGPKCGKEVERLDGWINYFLN--GDEERLEPLRLAYLL
        KSVSN PN IDRG+N   DDIQRLIQLLGLEDSCDE+ELG K GCNGCEGCESGFYSKI GLKGPKC KEVERL+GWI +F N  G+E+RLEPLRLAYLL
Subjt:  KSVSNNPNPIDRGENPPADDIQRLIQLLGLEDSCDEQELGAKSGCNGCEGCESGFYSKIAGLKGPKCGKEVERLDGWINYFLN--GDEERLEPLRLAYLL

Query:  MGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA
        +GKAVFASNG DGCL+GLEFPSTVEDFLLNDPPA
Subjt:  MGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA

A0A6J1END4 uncharacterized protein LOC1114341551.5e-8775Show/hide
Query:  MQPPPP------SLHSNFFSSLKQVEKRLKLDHSSQRDALHP------PPLPVETNSSLSASAEESLSSPMYLHLPLTNTSSALQESSEPPLQFLSNSSQ
        M PPPP      SLHS+FFSSLKQVEKRLKLD+ SQRDAL P      P LPVE +S  S+S EESLS+PMYLHLP TNT+S+LQESSEPP +FLSNSS 
Subjt:  MQPPPP------SLHSNFFSSLKQVEKRLKLDHSSQRDALHP------PPLPVETNSSLSASAEESLSSPMYLHLPLTNTSSALQESSEPPLQFLSNSSQ

Query:  SPLSPQKSVSNNPNPIDRGENPPADDIQRLIQLLGLEDSCDEQELGAKSGCNGCEGCESGFYSKIAGLKGPKCGKEVERLDGWINYFL--NGDEERLEPL
              KS SN+PN ID G+N P DDIQRL+QLLGL DS +EQELGA+SGCNGCEGCESGFYSKI GLKGPKCGKEVERL+GWI+YF    G+ ERLEPL
Subjt:  SPLSPQKSVSNNPNPIDRGENPPADDIQRLIQLLGLEDSCDEQELGAKSGCNGCEGCESGFYSKIAGLKGPKCGKEVERLDGWINYFL--NGDEERLEPL

Query:  RLAYLLMGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA
        RLAYLLMGKAVFASNG D CLEGLEFPSTVEDFLLNDPPA
Subjt:  RLAYLLMGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA

A0A6J1KGL6 uncharacterized protein LOC1114955901.2e-8675.64Show/hide
Query:  PPPP--SLHSNFFSSLKQVEKRLKLDHSSQRDALHP------PPLPVETNSSLSASAEESLSSPMYLHLPLTNTSSALQESSEPPLQFLSNSSQSPLSPQ
        PPPP  SLHS+FFSSLKQVEKRLKLD+ SQRDAL P      P LPVE +S  S+S EESLS+PMYLHL  TNT+S+LQESSEPP +FLSNSS       
Subjt:  PPPP--SLHSNFFSSLKQVEKRLKLDHSSQRDALHP------PPLPVETNSSLSASAEESLSSPMYLHLPLTNTSSALQESSEPPLQFLSNSSQSPLSPQ

Query:  KSVSNNPNPIDRGENPPADDIQRLIQLLGLEDSCDEQELGAKSGCNGCEGCESGFYSKIAGLKGPKCGKEVERLDGWINYFL--NGDEERLEPLRLAYLL
        KS SN+PN ID G+N P DDIQRL+QLLG  DS +E+ELGA+SGCNGCEGCESGFYSKI GLKGPKCGKEVERL+GWI YF    G+ ERLEPLRLAYLL
Subjt:  KSVSNNPNPIDRGENPPADDIQRLIQLLGLEDSCDEQELGAKSGCNGCEGCESGFYSKIAGLKGPKCGKEVERLDGWINYFL--NGDEERLEPLRLAYLL

Query:  MGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA
        MGKAVFASNGGD CLEGLEFPSTVEDFLLNDPPA
Subjt:  MGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCCGCCGCCTCCATCTCTTCACTCCAATTTCTTTTCGTCTCTAAAGCAGGTCGAAAAACGCCTCAAATTAGACCATTCATCGCAACGCGACGCTCTTCATCCACC
GCCATTGCCAGTAGAAACCAATTCTTCATTGTCAGCCTCAGCCGAAGAGTCACTGAGCTCTCCCATGTATCTTCATTTACCCCTAACCAACACAAGCTCCGCCCTACAAG
AAAGCAGCGAACCGCCGCTCCAATTCCTCTCAAATTCGTCACAATCTCCACTATCCCCTCAGAAATCGGTATCGAATAATCCGAATCCCATCGATCGTGGCGAAAATCCG
CCTGCAGATGACATTCAACGGCTGATTCAACTCCTAGGGTTAGAAGATTCGTGTGACGAGCAGGAATTGGGAGCTAAGAGTGGCTGTAATGGCTGTGAGGGTTGTGAAAG
CGGGTTTTACAGTAAGATCGCTGGCTTAAAAGGCCCCAAATGTGGGAAGGAGGTAGAGAGGCTTGATGGATGGATTAATTACTTCTTGAATGGTGATGAAGAGAGATTAG
AGCCTCTTAGATTGGCGTATTTGCTGATGGGGAAGGCTGTTTTCGCTTCTAATGGCGGTGATGGGTGTTTGGAAGGATTGGAATTCCCTTCAACTGTAGAGGATTTCTTG
CTGAATGATCCTCCTGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCCGCCGCCTCCATCTCTTCACTCCAATTTCTTTTCGTCTCTAAAGCAGGTCGAAAAACGCCTCAAATTAGACCATTCATCGCAACGCGACGCTCTTCATCCACC
GCCATTGCCAGTAGAAACCAATTCTTCATTGTCAGCCTCAGCCGAAGAGTCACTGAGCTCTCCCATGTATCTTCATTTACCCCTAACCAACACAAGCTCCGCCCTACAAG
AAAGCAGCGAACCGCCGCTCCAATTCCTCTCAAATTCGTCACAATCTCCACTATCCCCTCAGAAATCGGTATCGAATAATCCGAATCCCATCGATCGTGGCGAAAATCCG
CCTGCAGATGACATTCAACGGCTGATTCAACTCCTAGGGTTAGAAGATTCGTGTGACGAGCAGGAATTGGGAGCTAAGAGTGGCTGTAATGGCTGTGAGGGTTGTGAAAG
CGGGTTTTACAGTAAGATCGCTGGCTTAAAAGGCCCCAAATGTGGGAAGGAGGTAGAGAGGCTTGATGGATGGATTAATTACTTCTTGAATGGTGATGAAGAGAGATTAG
AGCCTCTTAGATTGGCGTATTTGCTGATGGGGAAGGCTGTTTTCGCTTCTAATGGCGGTGATGGGTGTTTGGAAGGATTGGAATTCCCTTCAACTGTAGAGGATTTCTTG
CTGAATGATCCTCCTGCATAA
Protein sequenceShow/hide protein sequence
MQPPPPSLHSNFFSSLKQVEKRLKLDHSSQRDALHPPPLPVETNSSLSASAEESLSSPMYLHLPLTNTSSALQESSEPPLQFLSNSSQSPLSPQKSVSNNPNPIDRGENP
PADDIQRLIQLLGLEDSCDEQELGAKSGCNGCEGCESGFYSKIAGLKGPKCGKEVERLDGWINYFLNGDEERLEPLRLAYLLMGKAVFASNGGDGCLEGLEFPSTVEDFL
LNDPPA