; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025124 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025124
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCotton fiber protein
Genome locationchr10:8815078..8815740
RNA-Seq ExpressionLag0025124
SyntenyLag0025124
Gene Ontology termsNA
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653186.1 hypothetical protein Csa_020019 [Cucumis sativus]1.5e-5164.68Show/hide
Query:  MSSNSNNSPPNPLVLDNSL--LP-NKPN-----------ILALFFSSLSLLSIFI----IFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHK
        MS NS + P N +V++NS+  LP +KP            +LA F S L LLSIFI    IFKNLSFSSLFNST+FWFFISNTLIFIIA DY LFSLS HK
Subjt:  MSSNSNNSPPNPLVLDNSL--LP-NKPN-----------ILALFFSSLSLLSIFI----IFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHK

Query:  SFQLYED--LSQPNPKETHFQLQSPPLVVFDEERENPDGKLKIVVQG--CDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMM--ARRWESVEFERKE
        SF LYED   S PNPK THFQLQ+  LVVFDE+RE PD KL+ VVQ    DSPS +++ TP RTY R KSEKPKR V  E  K M   RR ESV+ E KE
Subjt:  SFQLYED--LSQPNPKETHFQLQSPPLVVFDEERENPDGKLKIVVQG--CDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMM--ARRWESVEFERKE

Query:  LE-ENEFWKMTDEELNRRVEEFIQRFNREMRLQTR
        LE ENEF KMTDEELNRRVEEFIQRFN++MRLQT+
Subjt:  LE-ENEFWKMTDEELNRRVEEFIQRFNREMRLQTR

XP_022927149.1 uncharacterized protein LOC111434084 [Cucurbita moschata]8.1e-5363.01Show/hide
Query:  NSPPNPLVLDNSLLPNKPN-------------ILALFFSSLSLLSIFIIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSFQLYEDLSQP
        +S  N + +DN  +P KP              ILA F S L LLS  IIFKNLSFSSLFNST+FWFFISN LIFIIAADYA FSLS +K   LYE  S P
Subjt:  NSPPNPLVLDNSLLPNKPN-------------ILALFFSSLSLLSIFIIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSFQLYEDLSQP

Query:  NPKETHFQLQSPPLVVFDEERENPDGKLK-IVVQGCDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEFERKELEENEFWKMTDEELNR
        NPK THFQ Q+   VVFDE+RE PDG L+  V + CDS  P  + TP RTYRRSKSEKPKRSV KE +K MA+R ES ++E KELEENE+ KMTDEELNR
Subjt:  NPKETHFQLQSPPLVVFDEERENPDGKLK-IVVQGCDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEFERKELEENEFWKMTDEELNR

Query:  RVEEFIQRFNREMRLQTRT
        RVEEFIQRFN +MRL+T++
Subjt:  RVEEFIQRFNREMRLQTRT

XP_023001467.1 uncharacterized protein LOC111495593 [Cucurbita maxima]2.8e-5363.39Show/hide
Query:  NSPPNPLVLDNSLLPNKPN-------------ILALFFSSLSLLSIFIIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSFQLYEDLSQP
        +S  N + LDN  +P KP              ILA F S L LLS  IIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYA FSLS +K    YE  S P
Subjt:  NSPPNPLVLDNSLLPNKPN-------------ILALFFSSLSLLSIFIIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSFQLYEDLSQP

Query:  NPKETHFQLQSPPLVVFDEERENPDGKLKIVVQG-CDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEFERKELEENEFWKMTDEELNR
        NPK THFQ Q+   VVF+E+RE PDG L+ +VQ  CDS  P  + TP RTY+RSKSEKPKR+V KE +K MA+R ES ++E KELEENE+ KMTDEELNR
Subjt:  NPKETHFQLQSPPLVVFDEERENPDGKLKIVVQG-CDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEFERKELEENEFWKMTDEELNR

Query:  RVEEFIQRFNREMRLQTRT-ELKS
        RVEEFIQRFN +MRL+T++ ELKS
Subjt:  RVEEFIQRFNREMRLQTRT-ELKS

XP_023520225.1 uncharacterized protein LOC111783530 [Cucurbita pepo subsp. pepo]7.6e-5168.75Show/hide
Query:  ILALFFSSLSLLSIFIIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSFQLYEDLSQPNPKETHFQLQSPPLVVFDEERENPDGKLKIVV
        +LA F S L LL   IIFKNLSFSSLFNST+FWFFISN LIFIIAADYA FSL+ +K   LYE  S PNPK THFQ Q+   VVFDE+RE PDG L+  V
Subjt:  ILALFFSSLSLLSIFIIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSFQLYEDLSQPNPKETHFQLQSPPLVVFDEERENPDGKLKIVV

Query:  Q-GCDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEFERKELEENEFWKMTDEELNRRVEEFIQRFNREMRLQTRT-ELKS
        Q  CDS  P    TP RTY RSKSEKPKRSV KE +K MA+R ES  +E KELEENE+ KMTDEELNRRVEEFIQRFN +MRL+T++ ELKS
Subjt:  Q-GCDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEFERKELEENEFWKMTDEELNRRVEEFIQRFNREMRLQTRT-ELKS

XP_038877172.1 uncharacterized protein LOC120069472 [Benincasa hispida]4.3e-5466.08Show/hide
Query:  MSSNSNNSPPNPLVLDNSLLP-NKPN------------ILALFFSSLSLLSIFI----IFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKS
        MSSNS  SP N LV+DNS LP NKP             ILA F S L LLSIFI    IFKNLS  SLFNSTIFWFFISNTLIFIIA DY +FSL  HKS
Subjt:  MSSNSNNSPPNPLVLDNSLLP-NKPN------------ILALFFSSLSLLSIFI----IFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKS

Query:  FQLYEDLSQPNPKETHFQLQSPPLVVFDEERENPDGKLKIVVQGCDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEFERKELEENEFW
        F LYED S  NPK  HF+L S  LVVFDE++E    KL++VVQG    SP    TPART RR KSEKPK  V KE  KMM +R ESV++E KELEENEF 
Subjt:  FQLYEDLSQPNPKETHFQLQSPPLVVFDEERENPDGKLKIVVQGCDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEFERKELEENEFW

Query:  KMTDEELNRRVEEFIQRFNREMRLQTR
        KMTDEELNRRVEEFIQRFNR+MRLQT+
Subjt:  KMTDEELNRRVEEFIQRFNREMRLQTR

TrEMBL top hitse value%identityAlignment
A0A0A0M033 Uncharacterized protein4.5e-4158.56Show/hide
Query:  MSSNSNNSPPNPLVLDNSL--LP-NKPNILALFFSSLSLLSIFIIFKNLSFSSLFNS--TIFWFFISNTLIFIIAADYALFSLSHHKSFQLYED--LSQP
        MS NS + P N +V++NS+  LP +KP                   K   ++   N   T+FWFFISNTLIFIIA DY LFSLS HKSF LYED   S P
Subjt:  MSSNSNNSPPNPLVLDNSL--LP-NKPNILALFFSSLSLLSIFIIFKNLSFSSLFNS--TIFWFFISNTLIFIIAADYALFSLSHHKSFQLYED--LSQP

Query:  NPKETHFQLQSPPLVVFDEERENPDGKLKIVVQG--CDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMM--ARRWESVEFERKELE-ENEFWKMTDE
        NPK THFQLQ+  LVVFDE+RE PD KL+ VVQ    DSPS +++ TP RTY R KSEKPKR V  E  K M   RR ESV+ E KELE ENEF KMTDE
Subjt:  NPKETHFQLQSPPLVVFDEERENPDGKLKIVVQG--CDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMM--ARRWESVEFERKELE-ENEFWKMTDE

Query:  ELNRRVEEFIQRFNREMRLQTR
        ELNRRVEEFIQRFN++MRLQT+
Subjt:  ELNRRVEEFIQRFNREMRLQTR

A0A2N9GT34 Uncharacterized protein2.3e-2144.39Show/hide
Query:  PPNPLVLDNSLLPNKP-----------NILALFFSSLSLLSIFIIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSFQLYEDLSQPNPKE
        PP P ++++S+ PNK            +  A  FS    +SI  IF NLS S+LFN+T FWFF+SNTLI IIA DY  +S S  K     +D  Q    +
Subjt:  PPNPLVLDNSLLPNKP-----------NILALFFSSLSLLSIFIIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSFQLYEDLSQPNPKE

Query:  THFQLQSPPLVVFDEERENPDGKLKIVVQGCDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEFER-KELEENEFWKMTDEELNRRVEE
        T  Q+++ P  V     ++P+  +K VV+      P   K  A+ YRRSKSEK KR ++ E + ++ R  E+ + ER   LEENEF  M+DEELNRRVEE
Subjt:  THFQLQSPPLVVFDEERENPDGKLKIVVQGCDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEFER-KELEENEFWKMTDEELNRRVEE

Query:  FIQRFNREMRLQTR
        FIQRFNR++RLQ R
Subjt:  FIQRFNREMRLQTR

A0A6J1EH73 uncharacterized protein LOC1114340843.9e-5363.01Show/hide
Query:  NSPPNPLVLDNSLLPNKPN-------------ILALFFSSLSLLSIFIIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSFQLYEDLSQP
        +S  N + +DN  +P KP              ILA F S L LLS  IIFKNLSFSSLFNST+FWFFISN LIFIIAADYA FSLS +K   LYE  S P
Subjt:  NSPPNPLVLDNSLLPNKPN-------------ILALFFSSLSLLSIFIIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSFQLYEDLSQP

Query:  NPKETHFQLQSPPLVVFDEERENPDGKLK-IVVQGCDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEFERKELEENEFWKMTDEELNR
        NPK THFQ Q+   VVFDE+RE PDG L+  V + CDS  P  + TP RTYRRSKSEKPKRSV KE +K MA+R ES ++E KELEENE+ KMTDEELNR
Subjt:  NPKETHFQLQSPPLVVFDEERENPDGKLK-IVVQGCDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEFERKELEENEFWKMTDEELNR

Query:  RVEEFIQRFNREMRLQTRT
        RVEEFIQRFN +MRL+T++
Subjt:  RVEEFIQRFNREMRLQTRT

A0A6J1KGM0 uncharacterized protein LOC1114955931.3e-5363.39Show/hide
Query:  NSPPNPLVLDNSLLPNKPN-------------ILALFFSSLSLLSIFIIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSFQLYEDLSQP
        +S  N + LDN  +P KP              ILA F S L LLS  IIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYA FSLS +K    YE  S P
Subjt:  NSPPNPLVLDNSLLPNKPN-------------ILALFFSSLSLLSIFIIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSFQLYEDLSQP

Query:  NPKETHFQLQSPPLVVFDEERENPDGKLKIVVQG-CDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEFERKELEENEFWKMTDEELNR
        NPK THFQ Q+   VVF+E+RE PDG L+ +VQ  CDS  P  + TP RTY+RSKSEKPKR+V KE +K MA+R ES ++E KELEENE+ KMTDEELNR
Subjt:  NPKETHFQLQSPPLVVFDEERENPDGKLKIVVQG-CDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEFERKELEENEFWKMTDEELNR

Query:  RVEEFIQRFNREMRLQTRT-ELKS
        RVEEFIQRFN +MRL+T++ ELKS
Subjt:  RVEEFIQRFNREMRLQTRT-ELKS

A0A7N2LQF9 Uncharacterized protein4.8e-1940.25Show/hide
Query:  SPPNPLVLDNSLLP-----NKP------NILALFFSSLSLLSIFIIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSFQLYED-------
        +PPN  ++++S+ P     N P      +  A  FS    +S+  IF NLS S+LF +T FWFF+SNTLI IIA DY  +S S+ K   LY++       
Subjt:  SPPNPLVLDNSLLP-----NKP------NILALFFSSLSLLSIFIIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSFQLYED-------

Query:  -------------LSQPNPKETHFQLQSPPLVVFDEERENPDGKLKIVVQGCDSPSPSS---SKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEFE
                     + Q  PK+     Q    V+  E +  P+  L++V++  DS  PS     K  A+TYRRSKSE+ KR V+ E + ++ R       E
Subjt:  -------------LSQPNPKETHFQLQSPPLVVFDEERENPDGKLKIVVQGCDSPSPSS---SKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEFE

Query:  RKELEENEFWKMTDEELNRRVEEFIQRFNREMRLQT
         ++ EENEF  M+DEELNRRVEEFIQRFNRE+RLQ+
Subjt:  RKELEENEFWKMTDEELNRRVEEFIQRFNREMRLQT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30190.1 unknown protein3.4e-0930.52Show/hide
Query:  NILALFFSSLSLLSIFIIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSF---------------------------QLYEDLSQPNPKE
        ++L +F    + + IF +F+ +S SS+F  T   FFISNTLI IIAADY  FS    + F                           +  +D    NPK+
Subjt:  NILALFFSSLSLLSIFIIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSF---------------------------QLYEDLSQPNPKE

Query:  THFQ--------------LQSPP---LVVFDEERENPDGKLK----IVVQGCDSPSPSSSK---TPARTYRRSKSEKPKRSVLK-----------EREKM
          F+                SPP   + V  E+++  D  ++    +  Q   S    +++    P + Y RSKS+KP+R  L             R+K 
Subjt:  THFQ--------------LQSPP---LVVFDEERENPDGKLK----IVVQGCDSPSPSSSK---TPARTYRRSKSEKPKRSVLK-----------EREKM

Query:  MARRWESV--EFERKELEENEFWKMTDEELNRRVEEFIQRFNREMRLQT
           RW  +  ++E  + E  EF K+++EELN+RVEEFIQRFNR++R Q+
Subjt:  MARRWESV--EFERKELEENEFWKMTDEELNRRVEEFIQRFNREMRLQT

AT2G34610.1 unknown protein1.5e-0429.2Show/hide
Query:  PNKPNILALFFSSL--SLLSIF---IIFKNLSFS--SLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSF------QLYEDLSQ-PNPKETHFQLQSPP
        P KP      +SSL   +LSIF   +IF  L  S  S+FN T   F ISN LI IIAADY  F+   +  F       +  D  + P P+++ + +    
Subjt:  PNKPNILALFFSSL--SLLSIF---IIFKNLSFS--SLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSF------QLYEDLSQ-PNPKETHFQLQSPP

Query:  LVVFDEERENPDG------------KLKI---VVQGCDSPSP---------------------------SSSKTPARTYRRSKSEKPKRSV---------
             E++E P G            K K+   ++Q      P                           +S+   ++ Y RSKS+K + SV         
Subjt:  LVVFDEERENPDG------------KLKI---VVQGCDSPSP---------------------------SSSKTPARTYRRSKSEKPKRSV---------

Query:  LKEREKMMAR------RWESV---------------EFERKELEENEFWKMTDEELNRRVEEFIQRFNREMRLQ
        +K R K   R      +W  V               ++E  + E  EF KM++EELNRRVE+FIQRFNR+++ Q
Subjt:  LKEREKMMAR------RWESV---------------EFERKELEENEFWKMTDEELNRRVEEFIQRFNREMRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCCAATTCAAATAATTCACCTCCAAATCCACTAGTTCTAGATAACTCACTTCTCCCCAACAAACCAAACATATTAGCCTTATTCTTCTCTTCACTATCCCTTCT
CTCCATTTTCATTATCTTCAAAAACCTCTCCTTTTCATCTCTCTTCAACAGCACCATTTTCTGGTTCTTCATTTCCAACACTCTCATCTTCATCATTGCTGCTGATTATG
CCCTTTTCTCTCTCTCCCATCACAAAAGTTTCCAACTTTATGAAGATCTCTCACAACCAAACCCAAAGGAAACTCATTTTCAACTTCAAAGTCCTCCATTGGTTGTATTT
GATGAAGAGAGGGAAAACCCAGATGGGAAATTGAAAATCGTGGTTCAAGGATGCGACTCTCCGTCACCGTCCTCGTCGAAGACTCCGGCGAGGACTTACCGGCGGAGCAA
GTCGGAGAAACCGAAGAGAAGTGTGTTGAAAGAGAGGGAGAAAATGATGGCAAGGAGATGGGAAAGTGTTGAGTTTGAAAGGAAGGAATTAGAAGAAAATGAGTTTTGGA
AGATGACAGATGAAGAATTGAACAGAAGGGTGGAGGAATTTATTCAAAGATTTAACAGAGAGATGAGACTTCAAACAAGAACTGAATTAAAGTCTCTCGTTTTGAGAGAT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGTCATCCAATTCAAATAATTCACCTCCAAATCCACTAGTTCTAGATAACTCACTTCTCCCCAACAAACCAAACATATTAGCCTTATTCTTCTCTTCACTATCCCTTCT
CTCCATTTTCATTATCTTCAAAAACCTCTCCTTTTCATCTCTCTTCAACAGCACCATTTTCTGGTTCTTCATTTCCAACACTCTCATCTTCATCATTGCTGCTGATTATG
CCCTTTTCTCTCTCTCCCATCACAAAAGTTTCCAACTTTATGAAGATCTCTCACAACCAAACCCAAAGGAAACTCATTTTCAACTTCAAAGTCCTCCATTGGTTGTATTT
GATGAAGAGAGGGAAAACCCAGATGGGAAATTGAAAATCGTGGTTCAAGGATGCGACTCTCCGTCACCGTCCTCGTCGAAGACTCCGGCGAGGACTTACCGGCGGAGCAA
GTCGGAGAAACCGAAGAGAAGTGTGTTGAAAGAGAGGGAGAAAATGATGGCAAGGAGATGGGAAAGTGTTGAGTTTGAAAGGAAGGAATTAGAAGAAAATGAGTTTTGGA
AGATGACAGATGAAGAATTGAACAGAAGGGTGGAGGAATTTATTCAAAGATTTAACAGAGAGATGAGACTTCAAACAAGAACTGAATTAAAGTCTCTCGTTTTGAGAGAT
TGA
Protein sequenceShow/hide protein sequence
MSSNSNNSPPNPLVLDNSLLPNKPNILALFFSSLSLLSIFIIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSFQLYEDLSQPNPKETHFQLQSPPLVVF
DEERENPDGKLKIVVQGCDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEFERKELEENEFWKMTDEELNRRVEEFIQRFNREMRLQTRTELKSLVLRD