; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025159 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025159
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr10:9171071..9172104
RNA-Seq ExpressionLag0025159
SyntenyLag0025159
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010687479.1 PREDICTED: uncharacterized protein LOC104901585 [Beta vulgaris subsp. vulgaris]1.1e-1833.96Show/hide
Query:  WRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDVSEVGRL
        W+ P  G  KLN D ++  D + G  G VVR   G+V  A C  ++    VD+AE     +G+Q+  + GF   V+E D+L+L   L  + ++ S  G +
Subjt:  WRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDVSEVGRL

Query:  MDDVRMTLHPWDNSKVLFSPRQGNRVAHTLASLAFSY-GDRVWLEEGPIEIFDVLRGDV
        + D++  +H   +     + R+GN VAH LA +  S  G +VWLEE P+EI  ++  D+
Subjt:  MDDVRMTLHPWDNSKVLFSPRQGNRVAHTLASLAFSY-GDRVWLEEGPIEIFDVLRGDV

XP_021716820.1 uncharacterized protein LOC110684687 [Chenopodium quinoa]1.4e-1833.74Show/hide
Query:  WRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDVSEVGRL
        W+PP  G +K+N D ++  ++  G GG V+R   GEV +ATCL L+  + VD+AE  A+   +++  +  F    +ETD +++   L       + +G +
Subjt:  WRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDVSEVGRL

Query:  MDDVRMTLHPWDNSKVLFSPRQGNRVAHTLASLAFSYGD-RVWLEEGPIEIFDVLRGDVVPSF
        ++D+        +    F  R GN  AH LA L+ SYGD RVW+EE P EI   +  D+  +F
Subjt:  MDDVRMTLHPWDNSKVLFSPRQGNRVAHTLASLAFSYGD-RVWLEEGPIEIFDVLRGDVVPSF

XP_021767815.1 uncharacterized protein LOC110732205 [Chenopodium quinoa]1.4e-1834.15Show/hide
Query:  CVWRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDVSEVG
        C W+ P+ G +K+N D ++    + G GG V+R    +V +ATC+ L   + V++AE  A+   +++  + GF    +ETD+L+L   L     D +E G
Subjt:  CVWRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDVSEVG

Query:  RLMDDVRMTLHPWDNSKVLFSPRQGNRVAHTLASLAFSY-GDRVWLEEGPIEIFDVLRGDVVPS
         ++ D+ +       +   F  R GNRVA++LA L+  Y G RVWLE+ P+EI + +  D+ PS
Subjt:  RLMDDVRMTLHPWDNSKVLFSPRQGNRVAHTLASLAFSY-GDRVWLEEGPIEIFDVLRGDVVPS

XP_021809818.1 uncharacterized protein LOC110753261 [Prunus avium]3.1e-1836.2Show/hide
Query:  WRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDV-SEVGR
        W PP +G+ KLNVD +  P+T     G VVR  +GEV  A  L L    S   AE  A+  G+      GF+ F++E+DS  +V  +  D ++  +  G 
Subjt:  WRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDV-SEVGR

Query:  LMDDVRMTLHPWDNSKVLFSPRQGNRVAHTLASLAFSYGDRV-WLEEGPIEIFDVLRGDVVPS
        L+DD++ +L  ++   + FSPR+ N+VAH LA  A +  + V W+EE P  +  V+  D+V S
Subjt:  LMDDVRMTLHPWDNSKVLFSPRQGNRVAHTLASLAFSYGDRV-WLEEGPIEIFDVLRGDVVPS

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]6.8e-2139.38Show/hide
Query:  VWRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDVSEVGR
        +WRPPA   LK+NVD + R ++     G ++R   G V++     L R   VD  EG+AVY+G+ L  + GF  F +ETDSLR+  +L  D  D SEVG 
Subjt:  VWRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDVSEVGR

Query:  LMDDVRMTLHPW-DNSKVLFSPRQGNRVAHTLASLAFSYGD-RVWLEEGPIEIFDVLRGD
        L   +++ L    +     F+ R GN  AH LA LA +    ++W+EE P EI  VL  D
Subjt:  LMDDVRMTLHPW-DNSKVLFSPRQGNRVAHTLASLAFSYGD-RVWLEEGPIEIFDVLRGD

TrEMBL top hitse value%identityAlignment
A0A2I4GJL1 uncharacterized protein LOC1090084471.3e-1730.38Show/hide
Query:  WRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDVSEVGRL
        W+ P + ++K N D +   + +    G V+R  EGEV +  C   +      LAE WA++K +++  +L  +  + E D+  ++  ++ D++D S +G +
Subjt:  WRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDVSEVGRL

Query:  MDDVRMTLHPWDNSKVLFSPRQGNRVAHTLASLAFSYG-DRVWLEEGPIEIFDVLRGD
        ++D++          V F PR GNRVAH LA  A   G +++W+EEGP  I + +  D
Subjt:  MDDVRMTLHPWDNSKVLFSPRQGNRVAHTLASLAFSYG-DRVWLEEGPIEIFDVLRGD

A0A6J1DBJ7 uncharacterized protein LOC1110189733.3e-2139.38Show/hide
Query:  VWRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDVSEVGR
        +WRPPA   LK+NVD + R ++     G ++R   G V++     L R   VD  EG+AVY+G+ L  + GF  F +ETDSLR+  +L  D  D SEVG 
Subjt:  VWRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDVSEVGR

Query:  LMDDVRMTLHPW-DNSKVLFSPRQGNRVAHTLASLAFSYGD-RVWLEEGPIEIFDVLRGD
        L   +++ L    +     F+ R GN  AH LA LA +    ++W+EE P EI  VL  D
Subjt:  LMDDVRMTLHPW-DNSKVLFSPRQGNRVAHTLASLAFSYGD-RVWLEEGPIEIFDVLRGD

A0A6P5S7Q3 uncharacterized protein LOC1107532611.5e-1836.2Show/hide
Query:  WRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDV-SEVGR
        W PP +G+ KLNVD +  P+T     G VVR  +GEV  A  L L    S   AE  A+  G+      GF+ F++E+DS  +V  +  D ++  +  G 
Subjt:  WRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDV-SEVGR

Query:  LMDDVRMTLHPWDNSKVLFSPRQGNRVAHTLASLAFSYGDRV-WLEEGPIEIFDVLRGDVVPS
        L+DD++ +L  ++   + FSPR+ N+VAH LA  A +  + V W+EE P  +  V+  D+V S
Subjt:  LMDDVRMTLHPWDNSKVLFSPRQGNRVAHTLASLAFSYGDRV-WLEEGPIEIFDVLRGDVVPS

A0A6P9ECB2 uncharacterized protein LOC1183481597.6e-1830.38Show/hide
Query:  WRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDVSEVGRL
        W+ P + ++K N D ++  + +    G V+R  EGEV ++ C   +      LAE WA++K +++  +L  +  + E D   ++  ++ D +D S +G +
Subjt:  WRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDVSEVGRL

Query:  MDDVRMTLHPWDNSKVLFSPRQGNRVAHTLASLAFSYGD-RVWLEEGPIEIFDVLRGD
        ++D++          V F PR GNRVAH LA  A   G+ ++W+EEGP  I + +  D
Subjt:  MDDVRMTLHPWDNSKVLFSPRQGNRVAHTLASLAFSYGD-RVWLEEGPIEIFDVLRGD

A0A803Q6Y1 Uncharacterized protein1.3e-1736.54Show/hide
Query:  VWRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDVSEVGR
        VW+PP + KLK+NVD +   +TR    G VVR  +GEV  A    +Q C+  D  E  A++  +    Q   +  +VETD+LR+  +L+ +L D+S    
Subjt:  VWRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDVSEVGR

Query:  LMDDVRMTLHPWDNSKVLFSPRQGNRVAHTLASLAFSYGDRV-WLEEGPIEIFDVL
        L+ DVR  L  +    V  + RQ N+ AH LA  A    + V W+ E P  IF V+
Subjt:  LMDDVRMTLHPWDNSKVLFSPRQGNRVAHTLASLAFSYGDRV-WLEEGPIEIFDVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G33160.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein4.7e-0424.24Show/hide
Query:  WRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEV------------------FMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLR
        WR P  G +K NVD S       G+GG +VR   G                    F A  +++Q CWS          KG + +C  G  D     D + 
Subjt:  WRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEV------------------FMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLR

Query:  LVKILHGDLQDVSEVGRLMDDVRMTLHPWDNSKVLFSPRQGNRVAHTLASL----AFSYGDRVWL
         +K+  G    + ++         T   W N       RQ N+ A  LA       F + +  W+
Subjt:  LVKILHGDLQDVSEVGRLMDDVRMTLHPWDNSKVLFSPRQGNRVAHTLASL----AFSYGDRVWL

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.4e-0825.18Show/hide
Query:  WRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDVSEVGRL
        W+ P    +K N D + + +      G ++R   G V      +L R  +V  AE  A+   V  + +  +   + E+D+  LV +L+ D      +   
Subjt:  WRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDVSEVGRL

Query:  MDDVRMTLHPWDNSKVLFSPRQGNRVAHTLASLAFSYGD
        ++D++  LH ++  K  F+PR GN+VA  +A  + S+ +
Subjt:  MDDVRMTLHPWDNSKVLFSPRQGNRVAHTLASLAFSYGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGTTGTGTGTGGAGGCCACCGGCTATTGGAAAGCTGAAGCTGAATGTCGATGAATCTGTCAGGCCTGATACAAGGGAAGGTAGGGGTGGCTGTGTAGTGCGTGG
GGTTGAGGGTGAGGTCTTTATGGCGACATGTTTGAGCTTACAGAGGTGTTGGAGCGTGGACTTGGCTGAGGGTTGGGCTGTGTATAAAGGGGTTCAGCTTGTTTGTCAAC
TGGGGTTTACTGATTTTGTGGTGGAGACCGACTCCCTGAGACTAGTCAAAATCCTTCATGGTGATTTGCAAGATGTTTCGGAAGTAGGACGGCTGATGGATGACGTCCGA
ATGACCCTCCATCCTTGGGACAATAGCAAGGTTCTATTTTCGCCACGCCAGGGAAATAGGGTGGCGCATACCTTGGCTAGCTTGGCCTTTTCTTATGGAGACCGTGTTTG
GCTGGAAGAAGGGCCTATCGAAATTTTTGATGTTCTAAGGGGTGATGTTGTTCCATCTTTTTGTGCTGTGTCTTTGTCGGGGATTGAGGCGTTGGCTGGTGGCATAATCT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCGTTGTGTGTGGAGGCCACCGGCTATTGGAAAGCTGAAGCTGAATGTCGATGAATCTGTCAGGCCTGATACAAGGGAAGGTAGGGGTGGCTGTGTAGTGCGTGG
GGTTGAGGGTGAGGTCTTTATGGCGACATGTTTGAGCTTACAGAGGTGTTGGAGCGTGGACTTGGCTGAGGGTTGGGCTGTGTATAAAGGGGTTCAGCTTGTTTGTCAAC
TGGGGTTTACTGATTTTGTGGTGGAGACCGACTCCCTGAGACTAGTCAAAATCCTTCATGGTGATTTGCAAGATGTTTCGGAAGTAGGACGGCTGATGGATGACGTCCGA
ATGACCCTCCATCCTTGGGACAATAGCAAGGTTCTATTTTCGCCACGCCAGGGAAATAGGGTGGCGCATACCTTGGCTAGCTTGGCCTTTTCTTATGGAGACCGTGTTTG
GCTGGAAGAAGGGCCTATCGAAATTTTTGATGTTCTAAGGGGTGATGTTGTTCCATCTTTTTGTGCTGTGTCTTTGTCGGGGATTGAGGCGTTGGCTGGTGGCATAATCT
GA
Protein sequenceShow/hide protein sequence
MGRCVWRPPAIGKLKLNVDESVRPDTREGRGGCVVRGVEGEVFMATCLSLQRCWSVDLAEGWAVYKGVQLVCQLGFTDFVVETDSLRLVKILHGDLQDVSEVGRLMDDVR
MTLHPWDNSKVLFSPRQGNRVAHTLASLAFSYGDRVWLEEGPIEIFDVLRGDVVPSFCAVSLSGIEALAGGII