; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025183 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025183
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr10:9523347..9524003
RNA-Seq ExpressionLag0025183
SyntenyLag0025183
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4298754.1 unnamed protein product [Prunus armeniaca]4.8e-0831.87Show/hide
Query:  KSMALTGEESDVIKPKEMATPLSGASLELCLVGKVLSSKRVNVEAFRT-------IMRGSMTQPGSRLQVRTHLGYSSDH--RICNVPTQWQTVQMARML
        K ++LT EE D +  +   T      L LCLVG VL  +  N EAF+        +MR   T  G+R   R  L  ++D   +  N+P    TV+  R +
Subjt:  KSMALTGEESDVIKPKEMATPLSGASLELCLVGKVLSSKRVNVEAFRT-------IMRGSMTQPGSRLQVRTHLGYSSDH--RICNVPTQWQTVQMARML

Query:  GGRWGLWRRLM--GKGRMTGRDLC-----SDTSPLRSIDRCVGDSNSKMMMSKMYGVWFSMTLPDFCYVCGCLGHINENAQV
        G R G    +M    G   GR LC       T PLR + +   D + + ++   Y       LPDFCYVCG +GH+ +  ++
Subjt:  GGRWGLWRRLM--GKGRMTGRDLC-----SDTSPLRSIDRCVGDSNSKMMMSKMYGVWFSMTLPDFCYVCGCLGHINENAQV

CAB4298755.1 unnamed protein product [Prunus armeniaca]4.8e-0831.87Show/hide
Query:  KSMALTGEESDVIKPKEMATPLSGASLELCLVGKVLSSKRVNVEAFRT-------IMRGSMTQPGSRLQVRTHLGYSSDH--RICNVPTQWQTVQMARML
        K ++LT EE D +  +   T      L LCLVG VL  +  N EAF+        +MR   T  G+R   R  L  ++D   +  N+P    TV+  R +
Subjt:  KSMALTGEESDVIKPKEMATPLSGASLELCLVGKVLSSKRVNVEAFRT-------IMRGSMTQPGSRLQVRTHLGYSSDH--RICNVPTQWQTVQMARML

Query:  GGRWGLWRRLM--GKGRMTGRDLC-----SDTSPLRSIDRCVGDSNSKMMMSKMYGVWFSMTLPDFCYVCGCLGHINENAQV
        G R G    +M    G   GR LC       T PLR + +   D + + ++   Y       LPDFCYVCG +GH+ +  ++
Subjt:  GGRWGLWRRLM--GKGRMTGRDLC-----SDTSPLRSIDRCVGDSNSKMMMSKMYGVWFSMTLPDFCYVCGCLGHINENAQV

TXG64073.1 hypothetical protein EZV62_011067 [Acer yangbiense]4.2e-0426.16Show/hide
Query:  ELIKRWKSMALTGEESDVIKPKEMATPLSGASLELCLVGKVLSSKRVNVEAFRTIMRGSMTQPGSRLQVRTHLGYSSDHRICNVPTQWQTVQMARML---
        E+ K +++++L  E+  + +  E       A+++ CLVGKVLS K+VN+EAF+ ++     Q G+ +++      S  H I  +  +W   Q+  ++   
Subjt:  ELIKRWKSMALTGEESDVIKPKEMATPLSGASLELCLVGKVLSSKRVNVEAFRTIMRGSMTQPGSRLQVRTHLGYSSDHRICNVPTQWQTVQMARML---

Query:  ---GGRWGLWRRLMGKGRMTGRDLCSDTSPLRSIDRCVGDSNSKMMMSKMYGVWFSMTLPDFCYVCGCLGHI
              WG + R+        + L   + PL+   R   D +  ++   + G+ +   LP FCY CG +GH+
Subjt:  ---GGRWGLWRRLMGKGRMTGRDLCSDTSPLRSIDRCVGDSNSKMMMSKMYGVWFSMTLPDFCYVCGCLGHI

TXG70673.1 hypothetical protein EZV62_005608 [Acer yangbiense]7.2e-0428.16Show/hide
Query:  ELIKRWKSMALTGEESDVIKPKEMATPLSGASLELCLVGKVLSSKRVNVEAFRTIMRGSMTQPGSRLQVRTHLGYSSDHRICNVPTQWQTVQMARMLGG-
        E+ +  +S+++  +E  +   K+     +G  LELCLVGK+LSSK VN +AFR +M       G  L++  H          N P    T ++   LG  
Subjt:  ELIKRWKSMALTGEESDVIKPKEMATPLSGASLELCLVGKVLSSKRVNVEAFRTIMRGSMTQPGSRLQVRTHLGYSSDHRICNVPTQWQTVQMARMLGG-

Query:  -------RWGLWRRLMGKGRMTGRDLCSDTSPL-RSIDRCVGDSNSKMMMSKMYGVWFSMTLPDFCYVCGCLGH
                 GL     GK  +  R     + PL R +   + +  S+ ++   Y       LPD+C+ CG +GH
Subjt:  -------RWGLWRRLMGKGRMTGRDLCSDTSPL-RSIDRCVGDSNSKMMMSKMYGVWFSMTLPDFCYVCGCLGH

TrEMBL top hitse value%identityAlignment
A0A5C7I3H2 CCHC-type domain-containing protein2.1e-0426.16Show/hide
Query:  ELIKRWKSMALTGEESDVIKPKEMATPLSGASLELCLVGKVLSSKRVNVEAFRTIMRGSMTQPGSRLQVRTHLGYSSDHRICNVPTQWQTVQMARML---
        E+ K +++++L  E+  + +  E       A+++ CLVGKVLS K+VN+EAF+ ++     Q G+ +++      S  H I  +  +W   Q+  ++   
Subjt:  ELIKRWKSMALTGEESDVIKPKEMATPLSGASLELCLVGKVLSSKRVNVEAFRTIMRGSMTQPGSRLQVRTHLGYSSDHRICNVPTQWQTVQMARML---

Query:  ---GGRWGLWRRLMGKGRMTGRDLCSDTSPLRSIDRCVGDSNSKMMMSKMYGVWFSMTLPDFCYVCGCLGHI
              WG + R+        + L   + PL+   R   D +  ++   + G+ +   LP FCY CG +GH+
Subjt:  ---GGRWGLWRRLMGKGRMTGRDLCSDTSPLRSIDRCVGDSNSKMMMSKMYGVWFSMTLPDFCYVCGCLGHI

A0A5C7IMU7 zf-CCHC_4 domain-containing protein3.5e-0428.16Show/hide
Query:  ELIKRWKSMALTGEESDVIKPKEMATPLSGASLELCLVGKVLSSKRVNVEAFRTIMRGSMTQPGSRLQVRTHLGYSSDHRICNVPTQWQTVQMARMLGG-
        E+ +  +S+++  +E  +   K+     +G  LELCLVGK+LSSK VN +AFR +M       G  L++  H          N P    T ++   LG  
Subjt:  ELIKRWKSMALTGEESDVIKPKEMATPLSGASLELCLVGKVLSSKRVNVEAFRTIMRGSMTQPGSRLQVRTHLGYSSDHRICNVPTQWQTVQMARMLGG-

Query:  -------RWGLWRRLMGKGRMTGRDLCSDTSPL-RSIDRCVGDSNSKMMMSKMYGVWFSMTLPDFCYVCGCLGH
                 GL     GK  +  R     + PL R +   + +  S+ ++   Y       LPD+C+ CG +GH
Subjt:  -------RWGLWRRLMGKGRMTGRDLCSDTSPL-RSIDRCVGDSNSKMMMSKMYGVWFSMTLPDFCYVCGCLGH

A0A6J5WFC4 CCHC-type domain-containing protein2.3e-0831.87Show/hide
Query:  KSMALTGEESDVIKPKEMATPLSGASLELCLVGKVLSSKRVNVEAFRT-------IMRGSMTQPGSRLQVRTHLGYSSDH--RICNVPTQWQTVQMARML
        K ++LT EE D +  +   T      L LCLVG VL  +  N EAF+        +MR   T  G+R   R  L  ++D   +  N+P    TV+  R +
Subjt:  KSMALTGEESDVIKPKEMATPLSGASLELCLVGKVLSSKRVNVEAFRT-------IMRGSMTQPGSRLQVRTHLGYSSDH--RICNVPTQWQTVQMARML

Query:  GGRWGLWRRLM--GKGRMTGRDLC-----SDTSPLRSIDRCVGDSNSKMMMSKMYGVWFSMTLPDFCYVCGCLGHINENAQV
        G R G    +M    G   GR LC       T PLR + +   D + + ++   Y       LPDFCYVCG +GH+ +  ++
Subjt:  GGRWGLWRRLM--GKGRMTGRDLC-----SDTSPLRSIDRCVGDSNSKMMMSKMYGVWFSMTLPDFCYVCGCLGHINENAQV

A0A6J5WHB3 CCHC-type domain-containing protein2.3e-0831.87Show/hide
Query:  KSMALTGEESDVIKPKEMATPLSGASLELCLVGKVLSSKRVNVEAFRT-------IMRGSMTQPGSRLQVRTHLGYSSDH--RICNVPTQWQTVQMARML
        K ++LT EE D +  +   T      L LCLVG VL  +  N EAF+        +MR   T  G+R   R  L  ++D   +  N+P    TV+  R +
Subjt:  KSMALTGEESDVIKPKEMATPLSGASLELCLVGKVLSSKRVNVEAFRT-------IMRGSMTQPGSRLQVRTHLGYSSDH--RICNVPTQWQTVQMARML

Query:  GGRWGLWRRLM--GKGRMTGRDLC-----SDTSPLRSIDRCVGDSNSKMMMSKMYGVWFSMTLPDFCYVCGCLGHINENAQV
        G R G    +M    G   GR LC       T PLR + +   D + + ++   Y       LPDFCYVCG +GH+ +  ++
Subjt:  GGRWGLWRRLM--GKGRMTGRDLC-----SDTSPLRSIDRCVGDSNSKMMMSKMYGVWFSMTLPDFCYVCGCLGHINENAQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGTTGATCAAGCGGTGGAAGTCTATGGCATTGACAGGGGAGGAGTCTGATGTTATTAAGCCGAAGGAGATGGCGACTCCTCTGTCAGGGGCGTCACTGGAATT
ATGTCTGGTGGGCAAAGTACTCTCATCTAAAAGGGTGAACGTGGAGGCTTTCAGGACAATAATGAGAGGGTCCATGACGCAACCAGGATCGAGGCTGCAGGTGAGAACAC
ATTTGGGATACAGTTCCGATCACAGGATATGTAATGTGCCGACGCAGTGGCAGACGGTACAGATGGCGAGAATGTTGGGGGGAAGATGGGGACTGTGGAGGAGGTTGATG
GGCAAGGGGAGAATGACTGGGCGGGACCTGTGCTCCGATACGAGTCCGCTAAGATCGATAGACCGTTGCGTAGGGGATTCCAACTCCAAGATGATGATGAGCAAGATGTA
TGGTGTCTGGTTCTCTATGACGCTGCCTGATTTCTGTTATGTATGCGGGTGCTTGGGGCATATCAACGAGAATGCACAAGTGAGGCGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGTTGATCAAGCGGTGGAAGTCTATGGCATTGACAGGGGAGGAGTCTGATGTTATTAAGCCGAAGGAGATGGCGACTCCTCTGTCAGGGGCGTCACTGGAATT
ATGTCTGGTGGGCAAAGTACTCTCATCTAAAAGGGTGAACGTGGAGGCTTTCAGGACAATAATGAGAGGGTCCATGACGCAACCAGGATCGAGGCTGCAGGTGAGAACAC
ATTTGGGATACAGTTCCGATCACAGGATATGTAATGTGCCGACGCAGTGGCAGACGGTACAGATGGCGAGAATGTTGGGGGGAAGATGGGGACTGTGGAGGAGGTTGATG
GGCAAGGGGAGAATGACTGGGCGGGACCTGTGCTCCGATACGAGTCCGCTAAGATCGATAGACCGTTGCGTAGGGGATTCCAACTCCAAGATGATGATGAGCAAGATGTA
TGGTGTCTGGTTCTCTATGACGCTGCCTGATTTCTGTTATGTATGCGGGTGCTTGGGGCATATCAACGAGAATGCACAAGTGAGGCGGTAG
Protein sequenceShow/hide protein sequence
MEELIKRWKSMALTGEESDVIKPKEMATPLSGASLELCLVGKVLSSKRVNVEAFRTIMRGSMTQPGSRLQVRTHLGYSSDHRICNVPTQWQTVQMARMLGGRWGLWRRLM
GKGRMTGRDLCSDTSPLRSIDRCVGDSNSKMMMSKMYGVWFSMTLPDFCYVCGCLGHINENAQVRR