CuGenDBv2

Gene ID	Lag0025204
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	30-kDa cleavage and polyadenylation specificity factor 30
Genome location	chr10:9760126..9761835
RNA-Seq Expression	Lag0025204
Synteny	Lag0025204
Gene Ontology terms	GO:0000381 - regulation of alternative mRNA splicing, via spliceosome (biological process) GO:0005654 - nucleoplasm (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003729 - mRNA binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:1990247 - N6-methyladenosine-containing RNA binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6573397.1 30-kDa cleavage and polyadenylation specificity factor 30, partial [Cucurbita argyrosperma subsp. sororia]

5.3e-171

94.01

Show/hide

Query:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG
        L + ISRDCQELEPSIGEQLASLLYLEPDG+LMAVS+AAESKREEEKAKGVNPDI NENPDIVPFEDNEEEEEEESEEEEEESFGQSVG PAQGRGRGRG
Subjt:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG

Query:  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRG
        MMWPPHMPMGRGARPFHGMQGFPPGMMGPDG+SYGPVTPDGFPMPDIFGMAPRGF PYG RFSG+FM P SAMMFRGRPSQPGAMFPPGGFGMMMGQGRG
Subjt:  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRG

Query:  PFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTFRNE
        PFMGGMGVTGTNPARAGRPVG  PLYPPPAVPSSQNMNRA+KRDQRGPGSDRNDRYIAG DQN+GQE+PGSGHDDEMQYKQGSKAYPDEQYGMGTT RNE
Subjt:  PFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTFRNE

Query:  ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ
        ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ
Subjt:  ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ

XP_008445183.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor 30 [Cucumis melo]

1.5e-173

94.61

Show/hide

Query:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG
        L + ISRDCQELEPSIGEQLASLLYLEPDGELMAVS+AAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG
Subjt:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG

Query:  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRG
        +MWPPHMPMGRGARPFHGMQ FPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMF PGGFGMMMGQGRG
Subjt:  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRG

Query:  PFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTFRNE
        PFMGGMGVTGT+PAR GRPVGVSPLYPPPAVPS+QN+NRA+KRDQRGP SDRNDRYI GPDQNKGQEM  SGHD+ MQYKQGSKAYPDEQYGMGTTFRNE
Subjt:  PFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTFRNE

Query:  ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ
        ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ
Subjt:  ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ

XP_022140120.1 30-kDa cleavage and polyadenylation specificity factor 30 [Momordica charantia]

1.2e-175

95.21

Show/hide

Query:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG
        L + ISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIG+ENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG
Subjt:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG

Query:  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRG
        +MWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRG
Subjt:  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRG

Query:  PFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTFRNE
        PFMGGMGVTG NPAR GRPV VS LYPPPAVP SQNMNR VKRDQRGPG+DRNDRYIAGPDQ+KGQEMPGSGHDDEMQYKQGSKAYPDEQYG+GTTFRNE
Subjt:  PFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTFRNE

Query:  ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ
        ESESEDEAPRRSRHGEGKKKRRGSEGDAT +SDQ
Subjt:  ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ

XP_023541976.1 30-kDa cleavage and polyadenylation specificity factor 30-like [Cucurbita pepo subsp. pepo]

2.0e-170

93.71

Show/hide

Query:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG
        L + ISRDCQELEPSIGEQLASLLYLEPDG+LMAVS+AAESKREEEKAKGVNPDI NENPDIVPFEDNEEEEEEESEEEEEESFGQSVG PAQGRGRGRG
Subjt:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG

Query:  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRG
        MMWPPHMPMGRGARPFHGMQGFPPGMMGPDG+SYGPVTPDGFPMPDIFGMAPRGF PYG RFSG+FM P SAMMFRGRPSQPGAMFPPGGFGMMMGQGRG
Subjt:  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRG

Query:  PFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTFRNE
        PFMGGMGVTGTNPARAGRPVG  PLYPPPAVPSSQNMNRA+KRDQRGPGSDRNDRYIAG DQN+GQE+PGSGHDDEMQYKQGSKAYPDEQYGMGT  RNE
Subjt:  PFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTFRNE

Query:  ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ
        ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ
Subjt:  ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ

XP_038894441.1 30-kDa cleavage and polyadenylation specificity factor 30-like [Benincasa hispida]

2.4e-171

93.71

Show/hide

Query:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG
        L + ISRDCQELEPSIGEQLASLLYLEPDGELMAVS+AAE+KREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG
Subjt:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG

Query:  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRG
        +MWPPHMPMGRGARPFHGMQGFPPGM+GPDGLSYGPVTP+GFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMF P GFGMMMGQGRG
Subjt:  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRG

Query:  PFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTFRNE
        PFMGGMGVTGTNPAR GRPVGVSPLYPPPAVPS QN+NRAVKRDQRGP SDRNDRYI G DQNKGQEMPGSG+DD MQYKQGSK Y DEQYGMGTTFRNE
Subjt:  PFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTFRNE

Query:  ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ
        ESESEDEAPRRSRHGEGK+KRRGSEGDATAISDQ
Subjt:  ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BC28 30-kDa cleavage and polyadenylation specificity factor 30

7.3e-174

94.61

Show/hide

Query:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG
        L + ISRDCQELEPSIGEQLASLLYLEPDGELMAVS+AAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG
Subjt:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG

Query:  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRG
        +MWPPHMPMGRGARPFHGMQ FPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMF PGGFGMMMGQGRG
Subjt:  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRG

Query:  PFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTFRNE
        PFMGGMGVTGT+PAR GRPVGVSPLYPPPAVPS+QN+NRA+KRDQRGP SDRNDRYI GPDQNKGQEM  SGHD+ MQYKQGSKAYPDEQYGMGTTFRNE
Subjt:  PFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTFRNE

Query:  ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ
        ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ
Subjt:  ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ

A0A5D3C2W1 30-kDa cleavage and polyadenylation specificity factor 30

7.3e-174

94.61

Show/hide

Query:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG
        L + ISRDCQELEPSIGEQLASLLYLEPDGELMAVS+AAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG
Subjt:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG

Query:  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRG
        +MWPPHMPMGRGARPFHGMQ FPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMF PGGFGMMMGQGRG
Subjt:  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRG

Query:  PFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTFRNE
        PFMGGMGVTGT+PAR GRPVGVSPLYPPPAVPS+QN+NRA+KRDQRGP SDRNDRYI GPDQNKGQEM  SGHD+ MQYKQGSKAYPDEQYGMGTTFRNE
Subjt:  PFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTFRNE

Query:  ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ
        ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ
Subjt:  ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ

A0A6J1CE78 30-kDa cleavage and polyadenylation specificity factor 30

5.9e-176

95.21

Show/hide

Query:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG
        L + ISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIG+ENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG
Subjt:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG

Query:  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRG
        +MWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRG
Subjt:  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRG

Query:  PFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTFRNE
        PFMGGMGVTG NPAR GRPV VS LYPPPAVP SQNMNR VKRDQRGPG+DRNDRYIAGPDQ+KGQEMPGSGHDDEMQYKQGSKAYPDEQYG+GTTFRNE
Subjt:  PFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTFRNE

Query:  ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ
        ESESEDEAPRRSRHGEGKKKRRGSEGDAT +SDQ
Subjt:  ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ

A0A6J1GSL5 30-kDa cleavage and polyadenylation specificity factor 30-like

9.8e-171

93.71

Show/hide

Query:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG
        L + ISRDCQELEPSIGEQLASLLYLEPDG+LMAVS+AAESKREEEKAKGVNPDI NENPDIVPFEDNEEEEEEESEEEEEESFGQSVG PAQGRGRGRG
Subjt:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG

Query:  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRG
        MMWPPHMPMGRGARPFHGMQGFPPGMMGPDG+SYGPVTPDGFPMPDIFGMAPRGF PYG RFSG+FM P SAMMFRGRPSQPGAMFPPGGFGMMMGQGRG
Subjt:  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRG

Query:  PFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTFRNE
        PFMGGMGVTGTNPARAGRPVG  PLYPPPAVPSSQNMNRA+KRDQRGPGSDRNDRYIAG DQN+GQE+PGSGHDDEMQYKQGSKAYPDEQYGMGT  RNE
Subjt:  PFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTFRNE

Query:  ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ
        ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ
Subjt:  ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ

A0A6J1JWQ9 30-kDa cleavage and polyadenylation specificity factor 30-like

2.9e-170

93.41

Show/hide

Query:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG
        L + ISRDCQELEPSIGEQLASLLYLEPDG+LMAVS+AAESKREEEKAKGVNPDI NENPDIVPFEDNEEEEEEESEEEEEESFGQSVG PAQGRGRGRG
Subjt:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG

Query:  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRG
        +MWPPHMPMGRGARPFHGMQGFPPGMMGPDG+SYGPVTPDGFPMPDIFGMAPRGF PYG RFSG+FM P SAMMFRGRPSQPGAMFPPGGFGMMMGQGRG
Subjt:  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRG

Query:  PFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTFRNE
        PFMGGMGVTGTNPARAGRPVG  PLYPPPAVPSSQNMNRA+KRDQRGPGSDRNDRYIAG DQN+GQE+PGSGHDDEMQYKQGSKAYPDEQYGMGT  RNE
Subjt:  PFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTFRNE

Query:  ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ
        ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ
Subjt:  ESESEDEAPRRSRHGEGKKKRRGSEGDATAISDQ

SwissProt top hits

e value

%identity

Alignment

A9LNK9 30-kDa cleavage and polyadenylation specificity factor 30

1.1e-78

58.54

Show/hide

Query:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG
        L + ISRDCQELEPS+GEQLASLLYLEPD ELMA+S+AAE+KREEEKAKGVNP+   ENPDIVPFEDNEEEEEEE E EEEE   +S+    QGRGRGRG
Subjt:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG

Query:  MMWPPHMPMGRGARPFHGMQGFPPGMMGP-DGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGR
        +MWPP MP+GRG RP  GM GFP G+MGP D   YGP   +G  MPD FGM PR FGPYGPRF GDF GP   MMF GRP Q    FP GG+G MMG GR
Subjt:  MMWPPHMPMGRGARPFHGMQGFPPGMMGP-DGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGR

Query:  GPFMGGMGVTGTNPARAGRPVGVSPLYPPPAV----PSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGT
        GP MGGMG    N  R GR     P+Y PPA     P   N     + D+RG         ++G  QN+      + HD              EQ+ +G 
Subjt:  GPFMGGMGVTGTNPARAGRPVGVSPLYPPPAV----PSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGT

Query:  TFRNEESES--EDEAPRRSRHGEGKKKR
        + RNEESES  EDEAPRRSRHGEGKK+R
Subjt:  TFRNEESES--EDEAPRRSRHGEGKKKR

Q0DA50 Zinc finger CCCH domain-containing protein 45

5.3e-73

56.15

Show/hide

Query:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG
        L + ISRDCQELEP IGEQLASLLYLEPD EL A+ +AAE+K+EEEKAKGV+ D   +N DIV F+DNEEEEEEESEEEEE +     G  +QGRGRGRG
Subjt:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG

Query:  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFM--GPPSAMMFRGRPSQPGAMFPPGGFGMMMGQG
        MMWPP MPM RG  P  G +GFPP M+G DG  +G     GF MPD FG+ PRGF P+GPRF GDF   GP   M+F GRP QPG MFP  G  MMMG G
Subjt:  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFM--GPPSAMMFRGRPSQPGAMFPPGGFGMMMGQG

Query:  RGPFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQ-NKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTF
        RGP MGG+G+ G  P R  RPVG++P  PPP  P+    NR  KR+QR PG +R DRY    DQ ++G +  G+         +G+++   ++YG  +  
Subjt:  RGPFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQ-NKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTF

Query:  RNEESESEDE-APRRSR
        R+++SES++E APRRSR
Subjt:  RNEESESEDE-APRRSR

Arabidopsis top hits

e value

%identity

Alignment

AT1G30460.1 cleavage and polyadenylation specificity factor 30

7.9e-80

58.54

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Query:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG
        L + ISRDCQELEPS+GEQLASLLYLEPD ELMA+S+AAE+KREEEKAKGVNP+   ENPDIVPFEDNEEEEEEE E EEEE   +S+    QGRGRGRG
Subjt:  LGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRG

Query:  MMWPPHMPMGRGARPFHGMQGFPPGMMGP-DGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGR
        +MWPP MP+GRG RP  GM GFP G+MGP D   YGP   +G  MPD FGM PR FGPYGPRF GDF GP   MMF GRP Q    FP GG+G MMG GR
Subjt:  MMWPPHMPMGRGARPFHGMQGFPPGMMGP-DGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGR

Query:  GPFMGGMGVTGTNPARAGRPVGVSPLYPPPAV----PSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGT
        GP MGGMG    N  R GR     P+Y PPA     P   N     + D+RG         ++G  QN+      + HD              EQ+ +G 
Subjt:  GPFMGGMGVTGTNPARAGRPVGVSPLYPPPAV----PSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGT

Query:  TFRNEESES--EDEAPRRSRHGEGKKKR
        + RNEESES  EDEAPRRSRHGEGKK+R
Subjt:  TFRNEESES--EDEAPRRSRHGEGKKKR

Sequences

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CDS sequence

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ATGCCATCCCTACCCTCAATGCGATATGTTTCTTGCTTGCTTGCTCAATGCGATATGTTTCTTGCTTGCTTGCTTGGGTTGGGGATTAGTAGAGATTGCCAAGAGCTAGA
GCCCTCTATTGGTGAGCAGCTGGCTTCTTTGCTTTATCTTGAGCCAGATGGTGAACTCATGGCCGTCTCACTAGCAGCAGAATCGAAACGAGAAGAGGAGAAAGCAAAGG
GAGTTAATCCTGATATTGGAAATGAGAACCCAGATATTGTCCCGTTTGAGGATAATGAAGAAGAGGAAGAAGAAGAAAGTGAAGAGGAGGAGGAGGAGAGCTTTGGTCAG
TCCGTTGGTCTACCAGCTCAGGGCAGAGGAAGGGGCAGGGGAATGATGTGGCCTCCACACATGCCAATGGGACGTGGTGCCAGACCCTTCCATGGAATGCAGGGTTTTCC
ACCTGGGATGATGGGTCCAGATGGGTTGTCTTATGGACCTGTTACGCCTGATGGATTTCCCATGCCTGATATTTTTGGTATGGCTCCTCGTGGTTTCGGTCCGTACGGTC
CTAGGTTTTCCGGAGATTTTATGGGTCCTCCATCTGCTATGATGTTTCGTGGACGACCTTCTCAACCTGGGGCCATGTTTCCTCCGGGTGGATTTGGCATGATGATGGGT
CAAGGACGTGGTCCCTTCATGGGTGGGATGGGGGTTACTGGTACTAACCCAGCTCGAGCTGGTCGGCCTGTGGGTGTGTCTCCATTGTATCCACCTCCTGCAGTACCCTC
ATCTCAGAACATGAATCGAGCTGTGAAGAGAGATCAAAGGGGACCGGGTAGTGATCGGAATGATAGATATATTGCGGGTCCAGACCAAAACAAGGGCCAGGAGATGCCAG
GTAGTGGACATGATGACGAGATGCAATATAAACAGGGATCAAAAGCTTATCCCGATGAGCAATATGGCATGGGAACCACATTTAGGAATGAAGAAAGCGAAAGTGAGGAC
GAGGCACCTCGGCGATCAAGGCATGGAGAGGGGAAGAAGAAGCGGAGAGGCTCAGAGGGAGATGCCACTGCAATATCTGATCAGTGA

mRNA sequence

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Protein sequence

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MPSLPSMRYVSCLLAQCDMFLACLLGLGISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEESEEEEEESFGQ
SVGLPAQGRGRGRGMMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMG
QGRGPFMGGMGVTGTNPARAGRPVGVSPLYPPPAVPSSQNMNRAVKRDQRGPGSDRNDRYIAGPDQNKGQEMPGSGHDDEMQYKQGSKAYPDEQYGMGTTFRNEESESED
EAPRRSRHGEGKKKRRGSEGDATAISDQ

Lag0025204 (gene) of Sponge gourd (AG-4) v1 genome