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Lag0025213 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025213
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransmembrane protein
Genome locationchr10:9872005..9872565
RNA-Seq ExpressionLag0025213
SyntenyLag0025213
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583852.1 hypothetical protein SDJN03_19784, partial [Cucurbita argyrosperma subsp. sororia]3.5e-5782.58Show/hide
Query:  MPIHSLVAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATQTSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHDDRSGAAS--SSGD
        M I S +AA+A      AVIFLAGGSNARDLRPSEHGLEYQNPGA + SSP+MQSFFKGNSWSSS+VALPKAMNTSLP QWWNRSH DRSGAA+    GD
Subjt:  MPIHSLVAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATQTSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHDDRSGAAS--SSGD

Query:  HIRGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK
        HIRGALLVASLVCG+IGVSLLIASAFIY+FKFRKQ +RSSSSLSVSETTNIIANK
Subjt:  HIRGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK

XP_022927447.1 uncharacterized protein LOC111434271 [Cucurbita moschata]3.5e-5782.58Show/hide
Query:  MPIHSLVAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATQTSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHDDRSGAAS--SSGD
        M I S +AA+A      AVIFLAGGSNARDLRPSEHGLEYQNPGA + SSP+MQSFFKGNSWSSS+VALPKAMNTSLP QWWNRSH DRSGAA+    GD
Subjt:  MPIHSLVAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATQTSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHDDRSGAAS--SSGD

Query:  HIRGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK
        HIRGALLVASLVCG+IGVSLLIASAFIY+FKFRKQ +RSSSSLSVSETTNIIANK
Subjt:  HIRGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK

XP_023000949.1 uncharacterized protein LOC111495232 [Cucurbita maxima]3.9e-5683.01Show/hide
Query:  IHSLVAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATQTSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHDDRSGAAS--SSGDHI
        I S +AA A      AVIFLAGGSNARDLRPSEHGLEYQNPGA + SSP+MQSFFKGNSWSSS+VALPKAMNTSLP QWWNRSH DRS AA+   SGDHI
Subjt:  IHSLVAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATQTSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHDDRSGAAS--SSGDHI

Query:  RGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK
        RGALLVASLVCG+IGVSLLIASAFIY+FKFRKQ +RSSSSLSVSETTNIIANK
Subjt:  RGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK

XP_023519911.1 uncharacterized protein LOC111783236 [Cucurbita pepo subsp. pepo]4.6e-5782.58Show/hide
Query:  MPIHSLVAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATQTSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHDDRSGAA--SSSGD
        M I S +AA+A      AVIFLAGGSNARDLRPSEHGLEYQNPGA + SSP+MQSFFKGNSWSSS+VALPKAMNTSLP QWWNRSH DRSGAA     GD
Subjt:  MPIHSLVAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATQTSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHDDRSGAA--SSSGD

Query:  HIRGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK
        HIRGALLVASLVCG+IGVSLLIASAFIY+FKFRKQ +RSSSSLSVSETTNIIANK
Subjt:  HIRGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK

XP_038895122.1 uncharacterized protein LOC120083432 [Benincasa hispida]6.2e-5480.67Show/hide
Query:  KMPIHSLVAALAAVIFLAGGSNARDLRPSEHGLEYQNPGATQTSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHDDRSGAAS--SSGDHIRGA
        ++P  + V +  AVI LAG SNARDLRPSEHGLEYQNPGA + SSP+MQSFFKGNSWSSS+VALPKAMNTSLP QWWNRSH +RSGAA+    GDHIRGA
Subjt:  KMPIHSLVAALAAVIFLAGGSNARDLRPSEHGLEYQNPGATQTSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHDDRSGAAS--SSGDHIRGA

Query:  LLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK
        LLVASLVCGIIG+SLLIASAFIY FKFRKQ SRSSSSLSVSETTNII NK
Subjt:  LLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK

TrEMBL top hitse value%identityAlignment
A0A0A0LVV5 Uncharacterized protein5.3e-5177.24Show/hide
Query:  IHSLVAALAAVIFLAGGSNARDLRPSEHGLEYQNPGATQTSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHDDRSGAASSSGDHIRGALLVAS
        I S+ AAL  ++ LA  SNARDLRPSEHGL+YQNP A  +SSP+MQSFF+GNSWS+S+VALPKAMNTSLP QW NR+H +RSGA+++ GDHIRGALLVAS
Subjt:  IHSLVAALAAVIFLAGGSNARDLRPSEHGLEYQNPGATQTSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHDDRSGAASSSGDHIRGALLVAS

Query:  LVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK
        LVCGIIGVSLL+ASAFIY FKFRKQS  SSSS+SVSETTNIIANK
Subjt:  LVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK

A0A1S3BC63 uncharacterized protein LOC1034883248.1e-5280Show/hide
Query:  LVAALAAVI-FLAGGSNARDLRPSEHGLEYQNPGATQTSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHDDRSGAASSSGDHIRGALLVASLV
        L ++LA +I  LA  SNARDLRPSEHGL+YQNP A Q SSP+MQSFFKGNSWS+S+VALPKAMNTSLP QWWNRSH +RSGA+++ GDHIRGALLVASLV
Subjt:  LVAALAAVI-FLAGGSNARDLRPSEHGLEYQNPGATQTSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHDDRSGAASSSGDHIRGALLVASLV

Query:  CGIIGVSLLIASAFIYIFKFRKQ--SSRSSSSLSVSETTNIIANK
        CGIIGVSLL+ASAFIY FKFRKQ  SS SSSSLS SETTNIIANK
Subjt:  CGIIGVSLLIASAFIYIFKFRKQ--SSRSSSSLSVSETTNIIANK

A0A5D3C2L6 Uncharacterized protein8.1e-5280Show/hide
Query:  LVAALAAVI-FLAGGSNARDLRPSEHGLEYQNPGATQTSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHDDRSGAASSSGDHIRGALLVASLV
        L ++LA +I  LA  SNARDLRPSEHGL+YQNP A Q SSP+MQSFFKGNSWS+S+VALPKAMNTSLP QWWNRSH +RSGA+++ GDHIRGALLVASLV
Subjt:  LVAALAAVI-FLAGGSNARDLRPSEHGLEYQNPGATQTSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHDDRSGAASSSGDHIRGALLVASLV

Query:  CGIIGVSLLIASAFIYIFKFRKQ--SSRSSSSLSVSETTNIIANK
        CGIIGVSLL+ASAFIY FKFRKQ  SS SSSSLS SETTNIIANK
Subjt:  CGIIGVSLLIASAFIYIFKFRKQ--SSRSSSSLSVSETTNIIANK

A0A6J1EH69 uncharacterized protein LOC1114342711.7e-5782.58Show/hide
Query:  MPIHSLVAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATQTSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHDDRSGAAS--SSGD
        M I S +AA+A      AVIFLAGGSNARDLRPSEHGLEYQNPGA + SSP+MQSFFKGNSWSSS+VALPKAMNTSLP QWWNRSH DRSGAA+    GD
Subjt:  MPIHSLVAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATQTSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHDDRSGAAS--SSGD

Query:  HIRGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK
        HIRGALLVASLVCG+IGVSLLIASAFIY+FKFRKQ +RSSSSLSVSETTNIIANK
Subjt:  HIRGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK

A0A6J1KLE3 uncharacterized protein LOC1114952321.9e-5683.01Show/hide
Query:  IHSLVAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATQTSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHDDRSGAAS--SSGDHI
        I S +AA A      AVIFLAGGSNARDLRPSEHGLEYQNPGA + SSP+MQSFFKGNSWSSS+VALPKAMNTSLP QWWNRSH DRS AA+   SGDHI
Subjt:  IHSLVAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATQTSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHDDRSGAAS--SSGDHI

Query:  RGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK
        RGALLVASLVCG+IGVSLLIASAFIY+FKFRKQ +RSSSSLSVSETTNIIANK
Subjt:  RGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30515.1 unknown protein5.5e-0835.53Show/hide
Query:  HKTQASVNPFQKMPIHSLVAALAAVIFLAGGSNARDLRPSEHGLE-YQNPGATQTSSPEMQSFFKGNS-------WSSSEVALPKAMNTSLPQQWWNRSH
        HKT +   P   M I  ++   + +I      NAR+LRPS+HGLE Y  PG     S EM SFF   S        S S   LP A+ +  P +  ++  
Subjt:  HKTQASVNPFQKMPIHSLVAALAAVIFLAGGSNARDLRPSEHGLE-YQNPGATQTSSPEMQSFFKGNS-------WSSSEVALPKAMNTSLPQQWWNRSH

Query:  DDRSGAASSSGDHIRG-ALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRS
        DD         D +    L+V SLVCG+ GV+L++ASA IY   + K  + S
Subjt:  DDRSGAASSSGDHIRG-ALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRS

AT4G21740.1 unknown protein9.0e-1136.5Show/hide
Query:  LVAALAAVIFLAGGSNARDLRPSEHGLEYQ-NPGATQTSSP--EMQSFFKGNSWSSS-----EVALPK--AMNTSLPQQWWNRSHDDRSGAASSSGDHIR
        L   +  ++   G S A +LRPS+HGL+YQ +   T++ SP  +M+SFF G+S SSS        LPK  A +      WW      R GA       +R
Subjt:  LVAALAAVIFLAGGSNARDLRPSEHGLEYQ-NPGATQTSSP--EMQSFFKGNSWSSS-----EVALPK--AMNTSLPQQWWNRSHDDRSGAASSSGDHIR

Query:  GALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSS
           L AS++CG+ GV+LL+    IY F++RK +  +S
Subjt:  GALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTTTCACTCTCTTCCATATAAAACCAACGGCGCCATCGCCTCCCCTTTCCACACTCTCTCACAGATAAAAATCGACCACAAAACGCAAGCCTCGGTAAATCCATT
CCAGAAAATGCCGATTCACTCGCTCGTTGCCGCCCTCGCCGCCGTCATTTTCCTCGCCGGAGGCTCCAATGCGAGGGACCTCCGTCCGTCGGAGCACGGCTTGGAGTACC
AAAACCCTGGCGCTACCCAAACATCCTCGCCGGAGATGCAATCGTTCTTCAAAGGAAACTCCTGGTCCTCCTCCGAGGTCGCGCTTCCCAAGGCGATGAACACCAGCCTG
CCGCAGCAGTGGTGGAATCGCAGCCACGACGACCGCTCTGGCGCCGCCTCCTCCAGCGGAGATCACATTCGCGGCGCATTGCTTGTGGCGAGTTTGGTATGTGGAATTAT
AGGCGTTTCTTTGCTGATTGCTTCTGCTTTTATTTACATCTTCAAGTTCAGGAAGCAGAGTAGTAGATCGTCGTCCTCGCTCTCTGTCTCTGAAACTACTAACATTATCG
CTAACAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTTTCACTCTCTTCCATATAAAACCAACGGCGCCATCGCCTCCCCTTTCCACACTCTCTCACAGATAAAAATCGACCACAAAACGCAAGCCTCGGTAAATCCATT
CCAGAAAATGCCGATTCACTCGCTCGTTGCCGCCCTCGCCGCCGTCATTTTCCTCGCCGGAGGCTCCAATGCGAGGGACCTCCGTCCGTCGGAGCACGGCTTGGAGTACC
AAAACCCTGGCGCTACCCAAACATCCTCGCCGGAGATGCAATCGTTCTTCAAAGGAAACTCCTGGTCCTCCTCCGAGGTCGCGCTTCCCAAGGCGATGAACACCAGCCTG
CCGCAGCAGTGGTGGAATCGCAGCCACGACGACCGCTCTGGCGCCGCCTCCTCCAGCGGAGATCACATTCGCGGCGCATTGCTTGTGGCGAGTTTGGTATGTGGAATTAT
AGGCGTTTCTTTGCTGATTGCTTCTGCTTTTATTTACATCTTCAAGTTCAGGAAGCAGAGTAGTAGATCGTCGTCCTCGCTCTCTGTCTCTGAAACTACTAACATTATCG
CTAACAAGTGA
Protein sequenceShow/hide protein sequence
MLFHSLPYKTNGAIASPFHTLSQIKIDHKTQASVNPFQKMPIHSLVAALAAVIFLAGGSNARDLRPSEHGLEYQNPGATQTSSPEMQSFFKGNSWSSSEVALPKAMNTSL
PQQWWNRSHDDRSGAASSSGDHIRGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK