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Lag0025259 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025259
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr10:10569923..10571611
RNA-Seq ExpressionLag0025259
SyntenyLag0025259
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]7.3e-3748.45Show/hide
Query:  RGRAHPFGKFEKYTSTVIPQEQVLMEIRNTARGG-----SSRNRKATAREARFKPEYR--ANVKIHRILIDCGSPADVLSLIAFKAMQLERELLKPSLTP
        RG    + +  K T      +    EIR T  GG     S R RKA  REAR   E    ANVK+HR+L+D GS AD+LS  A+KAM L  ++LK S  P
Subjt:  RGRAHPFGKFEKYTSTVIPQEQVLMEIRNTARGG-----SSRNRKATAREARFKPEYR--ANVKIHRILIDCGSPADVLSLIAFKAMQLERELLKPSLTP

Query:  PVGFGGERVTLEDSIELSVTFWDGQNTITKIINFLVVDCMSTYNAILGRPTLHKMKVIASTYHHLLKFPTQNGVGVAKGEHKASRECYWIELKE
         VGFGGERV  E  IE  VTF  G  ++TK+++ LVV+  S+YNAILGRPT+H ++ I STYH  +KFPT  GVG  KGE + SRECY+  +++
Subjt:  PVGFGGERVTLEDSIELSVTFWDGQNTITKIINFLVVDCMSTYNAILGRPTLHKMKVIASTYHHLLKFPTQNGVGVAKGEHKASRECYWIELKE

XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]1.3e-3354.14Show/hide
Query:  ANVKIHRILIDCGSPADVLSLIAFKAMQLERELLKPSLTPPVGFGGERVTLEDSIELSVTFWDGQNTITKIINFLVVDCMSTYNAILGRPTLHKMKVIAS
        AN K+HRIL+D GS  D+ SL A+KAM L  E+LK SLTP +GFGGER+  +  IEL +TF     +IT++++FLVVD  S+YN IL RPT+H ++ I S
Subjt:  ANVKIHRILIDCGSPADVLSLIAFKAMQLERELLKPSLTPPVGFGGERVTLEDSIELSVTFWDGQNTITKIINFLVVDCMSTYNAILGRPTLHKMKVIAS

Query:  TYHHLLKFPTQNGVGVAKGEHKASRECYWIELK
        TYH  +KFPT  GVG  KGE + SRECY+  ++
Subjt:  TYHHLLKFPTQNGVGVAKGEHKASRECYWIELK

XP_022154102.1 uncharacterized protein LOC111021438 [Momordica charantia]1.7e-3358.91Show/hide
Query:  ANVKIHRILIDCGSPADVLSLIAFKAMQLERELLKPSLTPPVGFGGERVTLEDSIELSVTFWDGQNTITKIINFLVVDCMSTYNAILGRPTLHKMKVIAS
        AN K+HRIL+D GS AD +SL A+KAM L +E LK SLTP +GFGGERV     IEL VTF  G  +ITK+++FLVVD  S+YNAIL R T++ +K I S
Subjt:  ANVKIHRILIDCGSPADVLSLIAFKAMQLERELLKPSLTPPVGFGGERVTLEDSIELSVTFWDGQNTITKIINFLVVDCMSTYNAILGRPTLHKMKVIAS

Query:  TYHHLLKFPTQNGVGVAKGEHKASRECYW
        TYH  +KFPT  GVG  KGE +  RECY+
Subjt:  TYHHLLKFPTQNGVGVAKGEHKASRECYW

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]4.8e-3658.21Show/hide
Query:  ANVKIHRILIDCGSPADVLSLIAFKAMQLERELLKPSLTPPVGFGGERVTLEDSIELSVTFWDGQNTITKIINFLVVDCMSTYNAILGRPTLHKMKVIAS
        ANVK+HRIL+D GS AD++S  A+KAM L  ++LK S  P VGFGGERV LE  IEL VTF  G  ++TK+++FLVV+  S+YNAILGRPT+H +K I S
Subjt:  ANVKIHRILIDCGSPADVLSLIAFKAMQLERELLKPSLTPPVGFGGERVTLEDSIELSVTFWDGQNTITKIINFLVVDCMSTYNAILGRPTLHKMKVIAS

Query:  TYHHLLKFPTQNGVGVAKGEHKASRECYWIELKE
        TYH   KFPT  GVG  KGE + SRECY   +++
Subjt:  TYHHLLKFPTQNGVGVAKGEHKASRECYWIELKE

XP_022156748.1 uncharacterized protein LOC111023587 [Momordica charantia]3.4e-3457.14Show/hide
Query:  ANVKIHRILIDCGSPADVLSLIAFKAMQLERELLKPSLTPPVGFGGERVTLEDSIELSVTFWDGQNTITKIINFLVVDCMSTYNAILGRPTLHKMKVIAS
        ANVK+HRIL+D GS AD++S  A+KAM LE ++LK S  P VGFGGERV  E  IEL VTF  G   +TK+++FLVV+  S+YN ILGR T+H +KVI S
Subjt:  ANVKIHRILIDCGSPADVLSLIAFKAMQLERELLKPSLTPPVGFGGERVTLEDSIELSVTFWDGQNTITKIINFLVVDCMSTYNAILGRPTLHKMKVIAS

Query:  TYHHLLKFPTQNGVGVAKGEHKASRECYWIELK
        TYH  +KFPT  GV   KGE + SRECY+  ++
Subjt:  TYHHLLKFPTQNGVGVAKGEHKASRECYWIELK

TrEMBL top hitse value%identityAlignment
A0A6J1CTS4 uncharacterized protein LOC1110141473.6e-3748.45Show/hide
Query:  RGRAHPFGKFEKYTSTVIPQEQVLMEIRNTARGG-----SSRNRKATAREARFKPEYR--ANVKIHRILIDCGSPADVLSLIAFKAMQLERELLKPSLTP
        RG    + +  K T      +    EIR T  GG     S R RKA  REAR   E    ANVK+HR+L+D GS AD+LS  A+KAM L  ++LK S  P
Subjt:  RGRAHPFGKFEKYTSTVIPQEQVLMEIRNTARGG-----SSRNRKATAREARFKPEYR--ANVKIHRILIDCGSPADVLSLIAFKAMQLERELLKPSLTP

Query:  PVGFGGERVTLEDSIELSVTFWDGQNTITKIINFLVVDCMSTYNAILGRPTLHKMKVIASTYHHLLKFPTQNGVGVAKGEHKASRECYWIELKE
         VGFGGERV  E  IE  VTF  G  ++TK+++ LVV+  S+YNAILGRPT+H ++ I STYH  +KFPT  GVG  KGE + SRECY+  +++
Subjt:  PVGFGGERVTLEDSIELSVTFWDGQNTITKIINFLVVDCMSTYNAILGRPTLHKMKVIASTYHHLLKFPTQNGVGVAKGEHKASRECYWIELKE

A0A6J1CZ14 uncharacterized protein LOC1110159016.3e-3454.14Show/hide
Query:  ANVKIHRILIDCGSPADVLSLIAFKAMQLERELLKPSLTPPVGFGGERVTLEDSIELSVTFWDGQNTITKIINFLVVDCMSTYNAILGRPTLHKMKVIAS
        AN K+HRIL+D GS  D+ SL A+KAM L  E+LK SLTP +GFGGER+  +  IEL +TF     +IT++++FLVVD  S+YN IL RPT+H ++ I S
Subjt:  ANVKIHRILIDCGSPADVLSLIAFKAMQLERELLKPSLTPPVGFGGERVTLEDSIELSVTFWDGQNTITKIINFLVVDCMSTYNAILGRPTLHKMKVIAS

Query:  TYHHLLKFPTQNGVGVAKGEHKASRECYWIELK
        TYH  +KFPT  GVG  KGE + SRECY+  ++
Subjt:  TYHHLLKFPTQNGVGVAKGEHKASRECYWIELK

A0A6J1DKR9 uncharacterized protein LOC1110214388.2e-3458.91Show/hide
Query:  ANVKIHRILIDCGSPADVLSLIAFKAMQLERELLKPSLTPPVGFGGERVTLEDSIELSVTFWDGQNTITKIINFLVVDCMSTYNAILGRPTLHKMKVIAS
        AN K+HRIL+D GS AD +SL A+KAM L +E LK SLTP +GFGGERV     IEL VTF  G  +ITK+++FLVVD  S+YNAIL R T++ +K I S
Subjt:  ANVKIHRILIDCGSPADVLSLIAFKAMQLERELLKPSLTPPVGFGGERVTLEDSIELSVTFWDGQNTITKIINFLVVDCMSTYNAILGRPTLHKMKVIAS

Query:  TYHHLLKFPTQNGVGVAKGEHKASRECYW
        TYH  +KFPT  GVG  KGE +  RECY+
Subjt:  TYHHLLKFPTQNGVGVAKGEHKASRECYW

A0A6J1DQY2 uncharacterized protein LOC1110223212.3e-3658.21Show/hide
Query:  ANVKIHRILIDCGSPADVLSLIAFKAMQLERELLKPSLTPPVGFGGERVTLEDSIELSVTFWDGQNTITKIINFLVVDCMSTYNAILGRPTLHKMKVIAS
        ANVK+HRIL+D GS AD++S  A+KAM L  ++LK S  P VGFGGERV LE  IEL VTF  G  ++TK+++FLVV+  S+YNAILGRPT+H +K I S
Subjt:  ANVKIHRILIDCGSPADVLSLIAFKAMQLERELLKPSLTPPVGFGGERVTLEDSIELSVTFWDGQNTITKIINFLVVDCMSTYNAILGRPTLHKMKVIAS

Query:  TYHHLLKFPTQNGVGVAKGEHKASRECYWIELKE
        TYH   KFPT  GVG  KGE + SRECY   +++
Subjt:  TYHHLLKFPTQNGVGVAKGEHKASRECYWIELKE

A0A6J1DRG9 uncharacterized protein LOC1110235871.7e-3457.14Show/hide
Query:  ANVKIHRILIDCGSPADVLSLIAFKAMQLERELLKPSLTPPVGFGGERVTLEDSIELSVTFWDGQNTITKIINFLVVDCMSTYNAILGRPTLHKMKVIAS
        ANVK+HRIL+D GS AD++S  A+KAM LE ++LK S  P VGFGGERV  E  IEL VTF  G   +TK+++FLVV+  S+YN ILGR T+H +KVI S
Subjt:  ANVKIHRILIDCGSPADVLSLIAFKAMQLERELLKPSLTPPVGFGGERVTLEDSIELSVTFWDGQNTITKIINFLVVDCMSTYNAILGRPTLHKMKVIAS

Query:  TYHHLLKFPTQNGVGVAKGEHKASRECYWIELK
        TYH  +KFPT  GV   KGE + SRECY+  ++
Subjt:  TYHHLLKFPTQNGVGVAKGEHKASRECYWIELK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCTGAGGTGCCCCAGAAGTTCAAGGTTGAAAATGAGATCCATCAGCTCTTTCAAGGAATTAGCCCGAGCATTCCTCGCACAATTTATGGGAGCCAGAGAATAGC
ACAAGCCTCACATCAACCTCTTAACGTCAAACAACAGCCAGGTGAGAGCTTGCGTGATTATATAACACACTTTAACGAGGAAGCATTGCAGGGCACTGAAGTATATGAGC
GCAGAGGAATTACTGAAATCAAAGAGGTTAGGACGAGAGAGCACAAGAGACATTCTTCAGTCGATCAAGACAGGAAAAAAGATAAGAGACAGCAGATAGACGATGGTGGT
CGAGGTCGAGTCGACCATGACCATGGTCGAGGCCGAGCACATCCCTTCGGTAAATTCGAGAAATACACATCAACTGTCATTCCACAGGAGCAAGTTTTGATGGAGATTCG
AAACACGGCTAGAGGAGGTTCAAGTAGGAATAGGAAAGCTACTGCTAGGGAAGCAAGGTTTAAACCAGAATATCGAGCCAATGTGAAGATCCATCGGATTCTAATCGATT
GTGGGAGTCCAGCTGATGTCCTTTCTCTAATAGCCTTTAAGGCAATGCAGTTAGAGAGAGAACTTTTAAAACCAAGCCTTACCCCACCTGTAGGGTTTGGAGGAGAAAGA
GTGACCCTAGAGGATAGCATAGAACTTTCAGTGACCTTTTGGGATGGACAGAATACAATAACCAAGATAATAAACTTTCTAGTCGTGGATTGTATGTCAACCTACAATGC
AATCCTAGGAAGGCCAACCCTGCATAAAATGAAGGTCATAGCTTCAACCTATCATCATTTGTTGAAGTTTCCAACTCAGAATGGTGTAGGAGTCGCCAAAGGAGAGCATA
AGGCATCGAGAGAGTGTTACTGGATAGAGCTGAAGGAAGTCAAACCGCTGAGGGTCGAGGCCAACCAGAGCACATTTCCACCAACTCTGAATCTGAACTTATGGAGTTTT
AGGGCTTCTTGTTTATTGCATTTTATAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCTGAGGTGCCCCAGAAGTTCAAGGTTGAAAATGAGATCCATCAGCTCTTTCAAGGAATTAGCCCGAGCATTCCTCGCACAATTTATGGGAGCCAGAGAATAGC
ACAAGCCTCACATCAACCTCTTAACGTCAAACAACAGCCAGGTGAGAGCTTGCGTGATTATATAACACACTTTAACGAGGAAGCATTGCAGGGCACTGAAGTATATGAGC
GCAGAGGAATTACTGAAATCAAAGAGGTTAGGACGAGAGAGCACAAGAGACATTCTTCAGTCGATCAAGACAGGAAAAAAGATAAGAGACAGCAGATAGACGATGGTGGT
CGAGGTCGAGTCGACCATGACCATGGTCGAGGCCGAGCACATCCCTTCGGTAAATTCGAGAAATACACATCAACTGTCATTCCACAGGAGCAAGTTTTGATGGAGATTCG
AAACACGGCTAGAGGAGGTTCAAGTAGGAATAGGAAAGCTACTGCTAGGGAAGCAAGGTTTAAACCAGAATATCGAGCCAATGTGAAGATCCATCGGATTCTAATCGATT
GTGGGAGTCCAGCTGATGTCCTTTCTCTAATAGCCTTTAAGGCAATGCAGTTAGAGAGAGAACTTTTAAAACCAAGCCTTACCCCACCTGTAGGGTTTGGAGGAGAAAGA
GTGACCCTAGAGGATAGCATAGAACTTTCAGTGACCTTTTGGGATGGACAGAATACAATAACCAAGATAATAAACTTTCTAGTCGTGGATTGTATGTCAACCTACAATGC
AATCCTAGGAAGGCCAACCCTGCATAAAATGAAGGTCATAGCTTCAACCTATCATCATTTGTTGAAGTTTCCAACTCAGAATGGTGTAGGAGTCGCCAAAGGAGAGCATA
AGGCATCGAGAGAGTGTTACTGGATAGAGCTGAAGGAAGTCAAACCGCTGAGGGTCGAGGCCAACCAGAGCACATTTCCACCAACTCTGAATCTGAACTTATGGAGTTTT
AGGGCTTCTTGTTTATTGCATTTTATAATGTAA
Protein sequenceShow/hide protein sequence
MKAEVPQKFKVENEIHQLFQGISPSIPRTIYGSQRIAQASHQPLNVKQQPGESLRDYITHFNEEALQGTEVYERRGITEIKEVRTREHKRHSSVDQDRKKDKRQQIDDGG
RGRVDHDHGRGRAHPFGKFEKYTSTVIPQEQVLMEIRNTARGGSSRNRKATAREARFKPEYRANVKIHRILIDCGSPADVLSLIAFKAMQLERELLKPSLTPPVGFGGER
VTLEDSIELSVTFWDGQNTITKIINFLVVDCMSTYNAILGRPTLHKMKVIASTYHHLLKFPTQNGVGVAKGEHKASRECYWIELKEVKPLRVEANQSTFPPTLNLNLWSF
RASCLLHFIM