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Lag0025262 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025262
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr10:10598370..10598885
RNA-Seq ExpressionLag0025262
SyntenyLag0025262
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MCH80348.1 hypothetical protein [Trifolium medium]1.6e-1935.42Show/hide
Query:  EKEPSISFKPEERSNIEGNLGHNLIGKLLSSRIISSLAIKNAMVGAWKTRHKFSIKVPGKNLFAFKFSSQEDRDWVPANGPWLFDRSLLILEIPAADQCI
        +++ +I+ + EE  N + +    L+GK+ +    +  A K  M  AW++R+   I+   KNL+ FKF+++ + D V  NGPW FDR+LLIL I + ++  
Subjt:  EKEPSISFKPEERSNIEGNLGHNLIGKLLSSRIISSLAIKNAMVGAWKTRHKFSIKVPGKNLFAFKFSSQEDRDWVPANGPWLFDRSLLILEIPAADQCI

Query:  SKLKFNRVAFWLRLINLPMGYQNKCAAEKFGNLIGEFLEMEDEE
        S+L  + V+FW+R+ +LP+  +++  A+K GN +G F EM+ +E
Subjt:  SKLKFNRVAFWLRLINLPMGYQNKCAAEKFGNLIGEFLEMEDEE

MCH96370.1 hypothetical protein [Trifolium medium]8.3e-2136.81Show/hide
Query:  EKEPSISFKPEERSNIEGNLGHNLIGKLLSSRIISSLAIKNAMVGAWKTRHKFSIKVPGKNLFAFKFSSQEDRDWVPANGPWLFDRSLLILEIPAADQCI
        E++ +I  + EE  N + +    L+GK+ +    +  A K  M  AW+ R+   I+   +NLF FKF+++++ + V  NGPW FDR+LLIL   + D+  
Subjt:  EKEPSISFKPEERSNIEGNLGHNLIGKLLSSRIISSLAIKNAMVGAWKTRHKFSIKVPGKNLFAFKFSSQEDRDWVPANGPWLFDRSLLILEIPAADQCI

Query:  SKLKFNRVAFWLRLINLPMGYQNKCAAEKFGNLIGEFLEMEDEE
        S+L+ NRV+FW+R+ +LP+  +++  A+K GN++G F EM+ +E
Subjt:  SKLKFNRVAFWLRLINLPMGYQNKCAAEKFGNLIGEFLEMEDEE

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]2.6e-3039.52Show/hide
Query:  METEDLINEWQKFSLMEREKEPSISFKPEERSNIEGNLGHNLIGKLLSSRIISSLAIKNAMVGAWKTRHKFSIKVPGKNLFAFKFSSQEDRDWVPANGPW
        M+ E+L+ +WQKF L   E E ++    +     E  L ++L+GKLL+ RIIS+  +   ++ AWK  H+ +++  GKNLF F F  + D + V   GPW
Subjt:  METEDLINEWQKFSLMEREKEPSISFKPEERSNIEGNLGHNLIGKLLSSRIISSLAIKNAMVGAWKTRHKFSIKVPGKNLFAFKFSSQEDRDWVPANGPW

Query:  LFDRSLLILEIPAADQCISKLKFNRVAFWLRLINLPMGYQNKCAAEKFGNLIGEFLEMEDEEEDLGW
         FD++L++L+ P + + IS+L+FNRVAFW+ L +LPM + NK  A + GN IG F++++  E+   W
Subjt:  LFDRSLLILEIPAADQCISKLKFNRVAFWLRLINLPMGYQNKCAAEKFGNLIGEFLEMEDEEEDLGW

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.2e-1933.72Show/hide
Query:  METEDLINEWQKFSLMEREKEPSISFKPEERSNIEGNLGHNLIGKLLSSRIISSLAIKNAMVGAWKTRHK-FSIKVPGKNLFAFKFSSQEDRDWVPANGP
        M T DL+ EW+ F L   E+E +I       +     L   L+GKL   R I+   +KN M  AWK  +  F ++  G NLF F F+   DR+ +  +GP
Subjt:  METEDLINEWQKFSLMEREKEPSISFKPEERSNIEGNLGHNLIGKLLSSRIISSLAIKNAMVGAWKTRHK-FSIKVPGKNLFAFKFSSQEDRDWVPANGP

Query:  WLFDRSLLILEIPAADQCISKLKFNRVAFWLRLINLPMGYQNKCAAEKFGNLIGEFLEMEDEEEDLGWRDNI
        W FDR+L+++  P A    S+L F ++  W+R  +LP+G   +  A + GN +G F E + ++ +  W  N+
Subjt:  WLFDRSLLILEIPAADQCISKLKFNRVAFWLRLINLPMGYQNKCAAEKFGNLIGEFLEMEDEEEDLGWRDNI

XP_024042744.1 uncharacterized protein LOC112099563 [Citrus clementina]2.4e-2035.37Show/hide
Query:  METEDLINEWQKFSLME-REKEPSISFKPEERSNIEGNLGHNLIGKLLSSRIISSLAIKNAMVGAWKTRHKFSIKVPGKNLFAFKFSSQEDRDWVPANGP
        M+TE+LI + +  S+ E  E++ ++    EE+      + ++LIGK+L SR + +  I+NA+V AW+T  +  I+  G N+  FKF  + D+  V A GP
Subjt:  METEDLINEWQKFSLME-REKEPSISFKPEERSNIEGNLGHNLIGKLLSSRIISSLAIKNAMVGAWKTRHKFSIKVPGKNLFAFKFSSQEDRDWVPANGP

Query:  WLFDRSLLILEIPAADQCISKLKFNRVAFWLRLINLPMGYQNKCAAEKFGNLIGEFLEMEDEEE
        W FDR+L++L+ P+    + K  F   AFW+++ N+P+    +   +K G L+GE LE+E ++E
Subjt:  WLFDRSLLILEIPAADQCISKLKFNRVAFWLRLINLPMGYQNKCAAEKFGNLIGEFLEMEDEEE

TrEMBL top hitse value%identityAlignment
A0A2Z6LV25 Uncharacterized protein (Fragment)2.9e-1934.93Show/hide
Query:  EKEPSISFKPEERSNIEGNLGHNLIGKLLSSRIISSLAIKNAMVGAWKTRHKFSIKVPGKNLFAFKFSSQEDRDWVPANGPWLFDRSLLILEIPAADQCI
        +++ +I+ + EE  N + +    L+GK+ +    +  A K  M  AW++R+   I+   KNLF FKF+++ + D V  NGPW FDR+LLIL   + ++  
Subjt:  EKEPSISFKPEERSNIEGNLGHNLIGKLLSSRIISSLAIKNAMVGAWKTRHKFSIKVPGKNLFAFKFSSQEDRDWVPANGPWLFDRSLLILEIPAADQCI

Query:  SKLKFNRVAFWLRLINLPMGYQNKCAAEKFGNLIGEFLEMEDEEED
        S+L  + V+FW+R+ +LP+  +++  A+K GN +G F EM+ +E +
Subjt:  SKLKFNRVAFWLRLINLPMGYQNKCAAEKFGNLIGEFLEMEDEEED

A0A392M033 CCHC-type domain-containing protein (Fragment)7.5e-2035.42Show/hide
Query:  EKEPSISFKPEERSNIEGNLGHNLIGKLLSSRIISSLAIKNAMVGAWKTRHKFSIKVPGKNLFAFKFSSQEDRDWVPANGPWLFDRSLLILEIPAADQCI
        +++ +I+ + EE  N + +    L+GK+ +    +  A K  M  AW++R+   I+   KNL+ FKF+++ + D V  NGPW FDR+LLIL I + ++  
Subjt:  EKEPSISFKPEERSNIEGNLGHNLIGKLLSSRIISSLAIKNAMVGAWKTRHKFSIKVPGKNLFAFKFSSQEDRDWVPANGPWLFDRSLLILEIPAADQCI

Query:  SKLKFNRVAFWLRLINLPMGYQNKCAAEKFGNLIGEFLEMEDEE
        S+L  + V+FW+R+ +LP+  +++  A+K GN +G F EM+ +E
Subjt:  SKLKFNRVAFWLRLINLPMGYQNKCAAEKFGNLIGEFLEMEDEE

A0A392N997 DUF4283 domain-containing protein (Fragment)4.0e-2136.81Show/hide
Query:  EKEPSISFKPEERSNIEGNLGHNLIGKLLSSRIISSLAIKNAMVGAWKTRHKFSIKVPGKNLFAFKFSSQEDRDWVPANGPWLFDRSLLILEIPAADQCI
        E++ +I  + EE  N + +    L+GK+ +    +  A K  M  AW+ R+   I+   +NLF FKF+++++ + V  NGPW FDR+LLIL   + D+  
Subjt:  EKEPSISFKPEERSNIEGNLGHNLIGKLLSSRIISSLAIKNAMVGAWKTRHKFSIKVPGKNLFAFKFSSQEDRDWVPANGPWLFDRSLLILEIPAADQCI

Query:  SKLKFNRVAFWLRLINLPMGYQNKCAAEKFGNLIGEFLEMEDEE
        S+L+ NRV+FW+R+ +LP+  +++  A+K GN++G F EM+ +E
Subjt:  SKLKFNRVAFWLRLINLPMGYQNKCAAEKFGNLIGEFLEMEDEE

A0A6J1DU55 uncharacterized protein LOC1110231351.2e-3039.52Show/hide
Query:  METEDLINEWQKFSLMEREKEPSISFKPEERSNIEGNLGHNLIGKLLSSRIISSLAIKNAMVGAWKTRHKFSIKVPGKNLFAFKFSSQEDRDWVPANGPW
        M+ E+L+ +WQKF L   E E ++    +     E  L ++L+GKLL+ RIIS+  +   ++ AWK  H+ +++  GKNLF F F  + D + V   GPW
Subjt:  METEDLINEWQKFSLMEREKEPSISFKPEERSNIEGNLGHNLIGKLLSSRIISSLAIKNAMVGAWKTRHKFSIKVPGKNLFAFKFSSQEDRDWVPANGPW

Query:  LFDRSLLILEIPAADQCISKLKFNRVAFWLRLINLPMGYQNKCAAEKFGNLIGEFLEMEDEEEDLGW
         FD++L++L+ P + + IS+L+FNRVAFW+ L +LPM + NK  A + GN IG F++++  E+   W
Subjt:  LFDRSLLILEIPAADQCISKLKFNRVAFWLRLINLPMGYQNKCAAEKFGNLIGEFLEMEDEEEDLGW

A0A6J1DX30 uncharacterized protein LOC1110248745.8e-2033.72Show/hide
Query:  METEDLINEWQKFSLMEREKEPSISFKPEERSNIEGNLGHNLIGKLLSSRIISSLAIKNAMVGAWKTRHK-FSIKVPGKNLFAFKFSSQEDRDWVPANGP
        M T DL+ EW+ F L   E+E +I       +     L   L+GKL   R I+   +KN M  AWK  +  F ++  G NLF F F+   DR+ +  +GP
Subjt:  METEDLINEWQKFSLMEREKEPSISFKPEERSNIEGNLGHNLIGKLLSSRIISSLAIKNAMVGAWKTRHK-FSIKVPGKNLFAFKFSSQEDRDWVPANGP

Query:  WLFDRSLLILEIPAADQCISKLKFNRVAFWLRLINLPMGYQNKCAAEKFGNLIGEFLEMEDEEEDLGWRDNI
        W FDR+L+++  P A    S+L F ++  W+R  +LP+G   +  A + GN +G F E + ++ +  W  N+
Subjt:  WLFDRSLLILEIPAADQCISKLKFNRVAFWLRLINLPMGYQNKCAAEKFGNLIGEFLEMEDEEEDLGWRDNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACGGAGGATTTAATCAACGAATGGCAAAAGTTCAGCCTGATGGAGCGTGAAAAAGAGCCATCCATTTCGTTTAAACCTGAGGAGAGATCGAATATTGAAGGTAA
TCTTGGTCATAATCTAATCGGAAAGTTACTATCTAGTAGAATCATTTCAAGTCTGGCAATAAAGAATGCGATGGTTGGAGCTTGGAAGACCAGACATAAATTCAGTATTA
AGGTACCTGGAAAGAACCTTTTTGCCTTCAAATTCAGTAGCCAGGAGGACAGGGATTGGGTGCCTGCCAATGGCCCTTGGCTCTTCGACAGATCTTTACTCATTCTTGAA
ATTCCGGCAGCAGATCAATGTATCTCTAAGTTGAAATTCAATAGAGTGGCCTTTTGGTTAAGATTAATTAACTTGCCAATGGGCTACCAGAATAAATGTGCGGCGGAAAA
ATTTGGAAACCTTATTGGTGAATTCTTGGAGATGGAAGATGAGGAAGAGGATCTTGGTTGGAGGGACAACATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACGGAGGATTTAATCAACGAATGGCAAAAGTTCAGCCTGATGGAGCGTGAAAAAGAGCCATCCATTTCGTTTAAACCTGAGGAGAGATCGAATATTGAAGGTAA
TCTTGGTCATAATCTAATCGGAAAGTTACTATCTAGTAGAATCATTTCAAGTCTGGCAATAAAGAATGCGATGGTTGGAGCTTGGAAGACCAGACATAAATTCAGTATTA
AGGTACCTGGAAAGAACCTTTTTGCCTTCAAATTCAGTAGCCAGGAGGACAGGGATTGGGTGCCTGCCAATGGCCCTTGGCTCTTCGACAGATCTTTACTCATTCTTGAA
ATTCCGGCAGCAGATCAATGTATCTCTAAGTTGAAATTCAATAGAGTGGCCTTTTGGTTAAGATTAATTAACTTGCCAATGGGCTACCAGAATAAATGTGCGGCGGAAAA
ATTTGGAAACCTTATTGGTGAATTCTTGGAGATGGAAGATGAGGAAGAGGATCTTGGTTGGAGGGACAACATCTGA
Protein sequenceShow/hide protein sequence
METEDLINEWQKFSLMEREKEPSISFKPEERSNIEGNLGHNLIGKLLSSRIISSLAIKNAMVGAWKTRHKFSIKVPGKNLFAFKFSSQEDRDWVPANGPWLFDRSLLILE
IPAADQCISKLKFNRVAFWLRLINLPMGYQNKCAAEKFGNLIGEFLEMEDEEEDLGWRDNI