; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025264 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025264
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr10:10614960..10615595
RNA-Seq ExpressionLag0025264
SyntenyLag0025264
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7990634.1 hypothetical protein I3843_02G035100 [Carya illinoinensis]6.3e-5553.5Show/hide
Query:  MRSNKDLILEPLDPEIERTIHRIRRETRENFQMADPNPPEEPRPIRDYFQPVFQGQQSGIVYAPINANNFELKTSLIQMARDCAYRGSPTEDPNSHLKSF
        MR  +   + P+DPEIERT+  +RR   +   MA+ +    PR ++DY +PV  G  S I+  PINANNFELK +LI M +   + GSP +DPN HL  F
Subjt:  MRSNKDLILEPLDPEIERTIHRIRRETRENFQMADPNPPEEPRPIRDYFQPVFQGQQSGIVYAPINANNFELKTSLIQMARDCAYRGSPTEDPNSHLKSF

Query:  LDICGTVKINGVSEDAFRLRLFPFSLQDKARDWLQSITPRSITTWDALVHAFLKKFFPPAKTVKLRTKIGTFQQQYDEQLFEAWERFKELLRKCPHMDIP
        L+IC TVKINGV+ED  RLRLFPFSL+DKAR WLQS+ P SI +W  +   FL KFFPPAKT +LR++IG F+Q   E L+EAWER+K+L+R+CP   +P
Subjt:  LDICGTVKINGVSEDAFRLRLFPFSLQDKARDWLQSITPRSITTWDALVHAFLKKFFPPAKTVKLRTKIGTFQQQYDEQLFEAWERFKELLRKCPHMDIP

RWR83368.1 hypothetical protein CKAN_01212200 [Cinnamomum micranthum f. kanehirae]5.5e-5151.49Show/hide
Query:  MRSNKDLILEPLDPEIERTIHRIRRETRENFQMADPNPPEEP-RPIRDYFQPVFQGQQSGIVYAPINANNFELKTSLIQM-ARDCAYRGSPTEDPNSHLK
        MR N++L L PLDPEIERT+ R+++E ++  +       E+  R + DY  P+  G  S I    I ANNFE+K ++IQM A    + G P +DPN+H+ 
Subjt:  MRSNKDLILEPLDPEIERTIHRIRRETRENFQMADPNPPEEP-RPIRDYFQPVFQGQQSGIVYAPINANNFELKTSLIQM-ARDCAYRGSPTEDPNSHLK

Query:  SFLDICGTVKINGVSEDAFRLRLFPFSLQDKARDWLQSITPRSITTWDALVHAFLKKFFPPAKTVKLRTKIGTFQQQYDEQLFEAWERFKELLRKCPHMD
        +FL++C T K NGV++DA RLRL PFSL+DKA+ WL S+   +ITTWD L   FL KFFPP KTVK+R  I TF Q   E L+EAWER+KELLRKCPH  
Subjt:  SFLDICGTVKINGVSEDAFRLRLFPFSLQDKARDWLQSITPRSITTWDALVHAFLKKFFPPAKTVKLRTKIGTFQQQYDEQLFEAWERFKELLRKCPHMD

Query:  IP
        +P
Subjt:  IP

WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]1.8e-6258.17Show/hide
Query:  RSNKDLILEPLDPEIERTIHR-IRRETRENFQMADPNPPEEPRPIRDYFQPVFQGQQSGIVYAPINANNFELKTSLIQMARDCAYRGSPTEDPNSHLKSF
        R N +L+  PLDPEI+RT  R +R    +  +MA+    E P+ IRDYFQP     Q GI+  PIN NNFELK  LIQMAR+ A+RG   EDP+ HL+SF
Subjt:  RSNKDLILEPLDPEIERTIHR-IRRETRENFQMADPNPPEEPRPIRDYFQPVFQGQQSGIVYAPINANNFELKTSLIQMARDCAYRGSPTEDPNSHLKSF

Query:  LDICGTVKINGVSEDAFRLRLFPFSLQDKARDWLQSITPRSITTWDALVHAFLKKFFPPAKTVKLRTKIGTFQQQYDEQLFEAWERFKELLRKCPHMDIP
        L+ICGTVK+NGVS DA +LRLFPFSLQD+A+DWL++I P SITTW+ L  AFL K+FPPAK+ +LRT+IGTF+Q  DEQL+EAWER+K+LLR+CP    P
Subjt:  LDICGTVKINGVSEDAFRLRLFPFSLQDKARDWLQSITPRSITTWDALVHAFLKKFFPPAKTVKLRTKIGTFQQQYDEQLFEAWERFKELLRKCPHMDIP

Query:  TGSKFNCF
           +   F
Subjt:  TGSKFNCF

XP_020417987.1 uncharacterized protein LOC109948697 [Prunus persica]4.2e-5149.52Show/hide
Query:  RSNKDLILEPLDPEIERTIHRIRRETR-ENFQMADPNP-PEEPRPIRDYFQPVFQGQQSGIVYAPINANNFELKTSLIQMARDCA-YRGSPTEDPNSHLK
        R ++ L+LEPLDPEIERT+H++ +  R ++  +  P+P   E +P+RDY  P      S I    I+ANNFE++ ++I M +  + + G P EDPNSH+ 
Subjt:  RSNKDLILEPLDPEIERTIHRIRRETR-ENFQMADPNP-PEEPRPIRDYFQPVFQGQQSGIVYAPINANNFELKTSLIQMARDCA-YRGSPTEDPNSHLK

Query:  SFLDICGTVKINGVSEDAFRLRLFPFSLQDKARDWLQSITPRSITTWDALVHAFLKKFFPPAKTVKLRTKIGTFQQQYDEQLFEAWERFKELLRKCPHMD
        +FL+IC T K NG + DA RLRLFPFSL++KA+ WL S  P SITTWD L   FL KFFPPAKT KLR  I +F Q   E  +EAW+R+K++LRKCPH  
Subjt:  SFLDICGTVKINGVSEDAFRLRLFPFSLQDKARDWLQSITPRSITTWDALVHAFLKKFFPPAKTVKLRTKIGTFQQQYDEQLFEAWERFKELLRKCPHMD

Query:  IPTGSKFNCF
        +PT  +   F
Subjt:  IPTGSKFNCF

XP_021279280.1 LOW QUALITY PROTEIN: uncharacterized protein LOC110412945 [Herrania umbratica]4.2e-5152.09Show/hide
Query:  MRSNKDLILEPLDPEIERTIHRIRRETRE----NFQMADPN----------PPEEPRPIRDYFQPVFQGQQSGIVYAPINANNFELKTSLIQMARDCA-Y
        M+   +L L P DP+IERT  R RRE  +    N  MA+ N           PE  R +RDY  P+ QG    I    INANNFE+K + IQM +    +
Subjt:  MRSNKDLILEPLDPEIERTIHRIRRETRE----NFQMADPN----------PPEEPRPIRDYFQPVFQGQQSGIVYAPINANNFELKTSLIQMARDCA-Y

Query:  RGSPTEDPNSHLKSFLDICGTVKINGVSEDAFRLRLFPFSLQDKARDWLQSITPRSITTWDALVHAFLKKFFPPAKTVKLRTKIGTFQQQYDEQLFEAWE
         G P++DPNSHL +FL+IC T K NGV++DA RLRLFPFSL+DKA+ WL S+   SITTW+ L   FL KFFPPAKT K+R  I +F Q   E L+EAWE
Subjt:  RGSPTEDPNSHLKSFLDICGTVKINGVSEDAFRLRLFPFSLQDKARDWLQSITPRSITTWDALVHAFLKKFFPPAKTVKLRTKIGTFQQQYDEQLFEAWE

Query:  RFKELLRKCPHMDIP
        RFKELLR+CPH  IP
Subjt:  RFKELLRKCPHMDIP

TrEMBL top hitse value%identityAlignment
A0A3S3N117 Retrotrans_gag domain-containing protein2.7e-5151.49Show/hide
Query:  MRSNKDLILEPLDPEIERTIHRIRRETRENFQMADPNPPEEP-RPIRDYFQPVFQGQQSGIVYAPINANNFELKTSLIQM-ARDCAYRGSPTEDPNSHLK
        MR N++L L PLDPEIERT+ R+++E ++  +       E+  R + DY  P+  G  S I    I ANNFE+K ++IQM A    + G P +DPN+H+ 
Subjt:  MRSNKDLILEPLDPEIERTIHRIRRETRENFQMADPNPPEEP-RPIRDYFQPVFQGQQSGIVYAPINANNFELKTSLIQM-ARDCAYRGSPTEDPNSHLK

Query:  SFLDICGTVKINGVSEDAFRLRLFPFSLQDKARDWLQSITPRSITTWDALVHAFLKKFFPPAKTVKLRTKIGTFQQQYDEQLFEAWERFKELLRKCPHMD
        +FL++C T K NGV++DA RLRL PFSL+DKA+ WL S+   +ITTWD L   FL KFFPP KTVK+R  I TF Q   E L+EAWER+KELLRKCPH  
Subjt:  SFLDICGTVKINGVSEDAFRLRLFPFSLQDKARDWLQSITPRSITTWDALVHAFLKKFFPPAKTVKLRTKIGTFQQQYDEQLFEAWERFKELLRKCPHMD

Query:  IP
        +P
Subjt:  IP

A0A6J0ZX64 LOW QUALITY PROTEIN: uncharacterized protein LOC1104129452.1e-5152.09Show/hide
Query:  MRSNKDLILEPLDPEIERTIHRIRRETRE----NFQMADPN----------PPEEPRPIRDYFQPVFQGQQSGIVYAPINANNFELKTSLIQMARDCA-Y
        M+   +L L P DP+IERT  R RRE  +    N  MA+ N           PE  R +RDY  P+ QG    I    INANNFE+K + IQM +    +
Subjt:  MRSNKDLILEPLDPEIERTIHRIRRETRE----NFQMADPN----------PPEEPRPIRDYFQPVFQGQQSGIVYAPINANNFELKTSLIQMARDCA-Y

Query:  RGSPTEDPNSHLKSFLDICGTVKINGVSEDAFRLRLFPFSLQDKARDWLQSITPRSITTWDALVHAFLKKFFPPAKTVKLRTKIGTFQQQYDEQLFEAWE
         G P++DPNSHL +FL+IC T K NGV++DA RLRLFPFSL+DKA+ WL S+   SITTW+ L   FL KFFPPAKT K+R  I +F Q   E L+EAWE
Subjt:  RGSPTEDPNSHLKSFLDICGTVKINGVSEDAFRLRLFPFSLQDKARDWLQSITPRSITTWDALVHAFLKKFFPPAKTVKLRTKIGTFQQQYDEQLFEAWE

Query:  RFKELLRKCPHMDIP
        RFKELLR+CPH  IP
Subjt:  RFKELLRKCPHMDIP

A0A6J0ZYV0 uncharacterized protein LOC1104134132.7e-5152.09Show/hide
Query:  MRSNKDLILEPLDPEIERTIHRIRRETRE----NFQMADPN----------PPEEPRPIRDYFQPVFQGQQSGIVYAPINANNFELKTSLIQMARDCA-Y
        M+   +L L P DP+IERT  R RRE  +    N  MA+ N           PE  R +RDY  P+ QG    I    INANNFE+K + IQM +    +
Subjt:  MRSNKDLILEPLDPEIERTIHRIRRETRE----NFQMADPN----------PPEEPRPIRDYFQPVFQGQQSGIVYAPINANNFELKTSLIQMARDCA-Y

Query:  RGSPTEDPNSHLKSFLDICGTVKINGVSEDAFRLRLFPFSLQDKARDWLQSITPRSITTWDALVHAFLKKFFPPAKTVKLRTKIGTFQQQYDEQLFEAWE
         G P++DPNSHL +FL+IC T K NGV++DA RLRLFPFSL+DKA+ WL S+   SITTW+ L   FL KFFPPAKT K+R  I +F Q   E L+EAWE
Subjt:  RGSPTEDPNSHLKSFLDICGTVKINGVSEDAFRLRLFPFSLQDKARDWLQSITPRSITTWDALVHAFLKKFFPPAKTVKLRTKIGTFQQQYDEQLFEAWE

Query:  RFKELLRKCPHMDIP
        RFKELLR+CPH  IP
Subjt:  RFKELLRKCPHMDIP

A0A6P6W382 uncharacterized protein LOC1137297691.7e-5050.97Show/hide
Query:  PLDPEIERTIHRIRRETRENFQMADPNPPEE-----------------PRPIRDYFQPVFQGQQSGIVYAPINANNFELKTSLIQMARDCAYRGSPTEDP
        P DPEIER + R RR T    +     P EE                  R +RD+  P  QG Q+ I    +NANNFE+K SLIQM +   Y G+ TEDP
Subjt:  PLDPEIERTIHRIRRETRENFQMADPNPPEE-----------------PRPIRDYFQPVFQGQQSGIVYAPINANNFELKTSLIQMARDCAYRGSPTEDP

Query:  NSHLKSFLDICGTVKINGVSEDAFRLRLFPFSLQDKARDWLQSITPRSITTWDALVHAFLKKFFPPAKTVKLRTKIGTFQQQYDEQLFEAWERFKELLRK
        NSHL +FL+IC T+K NGVS+DA +LRLFPFSL+DKA+ WLQS  P + TTW  L  AFL KFFPP KT +LR  I +F QQ  E L+EAWE ++EL R+
Subjt:  NSHLKSFLDICGTVKINGVSEDAFRLRLFPFSLQDKARDWLQSITPRSITTWDALVHAFLKKFFPPAKTVKLRTKIGTFQQQYDEQLFEAWERFKELLRK

Query:  CPHMDI
        CPH D+
Subjt:  CPHMDI

A0A6P6X8N4 uncharacterized protein LOC1137407887.8e-5150.46Show/hide
Query:  RSNKDLILEPLDPEIERTIHRIRRETRENFQMADPNPPEE-----------------PRPIRDYFQPVFQGQQSGIVYAPINANNFELKTSLIQMARDCA
        RSN+++ L   DPEIERT+ R RR T    +     P EE                  R +RD+  P     Q+ I    +NANNFE+K+SLIQM +   
Subjt:  RSNKDLILEPLDPEIERTIHRIRRETRENFQMADPNPPEE-----------------PRPIRDYFQPVFQGQQSGIVYAPINANNFELKTSLIQMARDCA

Query:  YRGSPTEDPNSHLKSFLDICGTVKINGVSEDAFRLRLFPFSLQDKARDWLQSITPRSITTWDALVHAFLKKFFPPAKTVKLRTKIGTFQQQYDEQLFEAW
        Y G+ TEDPNSHL +FL+IC T+K NGVSEDA +LRLFPFSL+DK   WLQS  P + TTW  L  AFL KFFPP KT KLR  I +F QQ  E L+E W
Subjt:  YRGSPTEDPNSHLKSFLDICGTVKINGVSEDAFRLRLFPFSLQDKARDWLQSITPRSITTWDALVHAFLKKFFPPAKTVKLRTKIGTFQQQYDEQLFEAW

Query:  ERFKELLRKCPHMDIP
        ER++EL RKCPH  +P
Subjt:  ERFKELLRKCPHMDIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAAGTAATAAAGACTTGATTTTGGAACCTTTGGATCCCGAGATCGAGAGAACAATTCATAGGATTCGAAGGGAAACTAGAGAAAATTTTCAAATGGCCGACCCAAA
TCCACCTGAGGAGCCTAGGCCTATTAGAGATTACTTTCAGCCCGTGTTTCAGGGGCAACAATCGGGGATTGTCTATGCCCCGATTAATGCCAACAACTTTGAGCTGAAGA
CCAGTCTCATTCAGATGGCTCGCGACTGTGCATACAGAGGATCGCCCACCGAGGATCCAAATTCTCATCTAAAATCATTCTTGGATATTTGTGGGACAGTAAAAATTAAT
GGAGTTTCTGAGGATGCTTTTCGCTTACGCTTATTTCCTTTTTCTTTGCAGGATAAAGCACGAGATTGGTTGCAGTCTATTACCCCTAGGAGCATCACCACCTGGGATGC
TTTGGTCCATGCCTTTTTGAAGAAATTTTTCCCTCCTGCAAAGACGGTCAAGCTGAGGACCAAGATTGGGACATTCCAACAACAATATGATGAACAGCTGTTCGAGGCCT
GGGAGCGATTTAAAGAGTTGCTGAGGAAGTGTCCTCACATGGATATCCCGACTGGCTCCAAGTTCAATTGTTTTACAATGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGAAGTAATAAAGACTTGATTTTGGAACCTTTGGATCCCGAGATCGAGAGAACAATTCATAGGATTCGAAGGGAAACTAGAGAAAATTTTCAAATGGCCGACCCAAA
TCCACCTGAGGAGCCTAGGCCTATTAGAGATTACTTTCAGCCCGTGTTTCAGGGGCAACAATCGGGGATTGTCTATGCCCCGATTAATGCCAACAACTTTGAGCTGAAGA
CCAGTCTCATTCAGATGGCTCGCGACTGTGCATACAGAGGATCGCCCACCGAGGATCCAAATTCTCATCTAAAATCATTCTTGGATATTTGTGGGACAGTAAAAATTAAT
GGAGTTTCTGAGGATGCTTTTCGCTTACGCTTATTTCCTTTTTCTTTGCAGGATAAAGCACGAGATTGGTTGCAGTCTATTACCCCTAGGAGCATCACCACCTGGGATGC
TTTGGTCCATGCCTTTTTGAAGAAATTTTTCCCTCCTGCAAAGACGGTCAAGCTGAGGACCAAGATTGGGACATTCCAACAACAATATGATGAACAGCTGTTCGAGGCCT
GGGAGCGATTTAAAGAGTTGCTGAGGAAGTGTCCTCACATGGATATCCCGACTGGCTCCAAGTTCAATTGTTTTACAATGGTTTGA
Protein sequenceShow/hide protein sequence
MRSNKDLILEPLDPEIERTIHRIRRETRENFQMADPNPPEEPRPIRDYFQPVFQGQQSGIVYAPINANNFELKTSLIQMARDCAYRGSPTEDPNSHLKSFLDICGTVKIN
GVSEDAFRLRLFPFSLQDKARDWLQSITPRSITTWDALVHAFLKKFFPPAKTVKLRTKIGTFQQQYDEQLFEAWERFKELLRKCPHMDIPTGSKFNCFTMV