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Lag0025272 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025272
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr10:10684639..10684959
RNA-Seq ExpressionLag0025272
SyntenyLag0025272
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAK39575.1 putative reverse transcriptase [Oryza sativa Japonica Group]3.9e-1342.53Show/hide
Query:  SRSSYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWLPRPHSFKIVGYKIYCEEMRAMECVLPTGQWDIPKLQQFLYEDDVQEII
        S SS  W+   +GLDLLKKG+  +VG+G SIR+ RDPWLPR HS + +  K  C      + +   G WD+PK+ Q+ +  D + I+
Subjt:  SRSSYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWLPRPHSFKIVGYKIYCEEMRAMECVLPTGQWDIPKLQQFLYEDDVQEII

ACK44480.1 hypothetical protein 2 [Triticum aestivum]2.0e-1241.18Show/hide
Query:  SSYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWLPRPHSFKIVGYKIYCEEMRAMECVLPTGQWDIPKLQQFLYEDDVQEII
        +S  W+   +GL+LLKKGL  +VG+G+++R++RDPWLPRP S++ V  +  C   R  + +   G WD+  L+Q+    DV+EI+
Subjt:  SSYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWLPRPHSFKIVGYKIYCEEMRAMECVLPTGQWDIPKLQQFLYEDDVQEII

XP_022131662.1 uncharacterized protein LOC111004787 [Momordica charantia]9.4e-1545.57Show/hide
Query:  SYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWLPRPHSFKIVGYKIYCEEMRAMECVLPTGQWDIPKLQQFLYEDD
        SYFWKGFIWG DLL KGLR +VG+G +I +  DPW+PRP+SF+ +       +++  + + P GQWD+  +     E+D
Subjt:  SYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWLPRPHSFKIVGYKIYCEEMRAMECVLPTGQWDIPKLQQFLYEDD

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.3e-1341.86Show/hide
Query:  AGVTSRSSYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWLPRPHSFKIVGYKIYCEEMRAMECVLPTGQWDIPKLQQFLYEDD
        A   S+SSYFWKGF+WG DLL KGLR +VG+G +I+   DPWLPRP +FK + +     +      +   G WD+  +      +D
Subjt:  AGVTSRSSYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWLPRPHSFKIVGYKIYCEEMRAMECVLPTGQWDIPKLQQFLYEDD

XP_025877668.1 uncharacterized protein LOC4351546 [Oryza sativa Japonica Group]3.3e-1241.38Show/hide
Query:  SRSSYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWLPRPHSFKIVGYKIYCEEMRAMECVLPTGQWDIPKLQQFLYEDDVQEII
        S SS  W+   +GLDLLKKG+  +VG+G SIR+ RD WLPR HS + +  K  C      + +   G WD+PK+ Q+ +  D + I+
Subjt:  SRSSYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWLPRPHSFKIVGYKIYCEEMRAMECVLPTGQWDIPKLQQFLYEDDVQEII

TrEMBL top hitse value%identityAlignment
A0A6J1BRN0 uncharacterized protein LOC1110047874.5e-1545.57Show/hide
Query:  SYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWLPRPHSFKIVGYKIYCEEMRAMECVLPTGQWDIPKLQQFLYEDD
        SYFWKGFIWG DLL KGLR +VG+G +I +  DPW+PRP+SF+ +       +++  + + P GQWD+  +     E+D
Subjt:  SYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWLPRPHSFKIVGYKIYCEEMRAMECVLPTGQWDIPKLQQFLYEDD

A0A6J1DX30 uncharacterized protein LOC1110248741.1e-1341.86Show/hide
Query:  AGVTSRSSYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWLPRPHSFKIVGYKIYCEEMRAMECVLPTGQWDIPKLQQFLYEDD
        A   S+SSYFWKGF+WG DLL KGLR +VG+G +I+   DPWLPRP +FK + +     +      +   G WD+  +      +D
Subjt:  AGVTSRSSYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWLPRPHSFKIVGYKIYCEEMRAMECVLPTGQWDIPKLQQFLYEDD

M5VP36 Uncharacterized protein (Fragment)8.5e-1440.48Show/hide
Query:  SSYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWLPRPHSFKIVGYKIYCEEMRAMECVLPTGQWDIPKLQQFLYEDDVQEI
        SSY W+  IWG +LL  GLR+++GDG+   V  D W+PRP+SF++V  ++  +E +  + + PTG W++  L    +E DV+ I
Subjt:  SSYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWLPRPHSFKIVGYKIYCEEMRAMECVLPTGQWDIPKLQQFLYEDDVQEI

M5XJH9 Uncharacterized protein (Fragment)6.5e-1436.96Show/hide
Query:  MLAGVTSRSSYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWLPRPHSFKIVGYKIYCEEMRAMECVLPTGQWDIPKLQQFLYEDDVQEI
        +  G    SSYFW+  IWG +LL  GLR+++GDG+   V  D W+PRP+SF+ +  ++  +E +  + + P G W++  L    +E+DV+ I
Subjt:  MLAGVTSRSSYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWLPRPHSFKIVGYKIYCEEMRAMECVLPTGQWDIPKLQQFLYEDDVQEI

Q94HY0 Retrotransposon protein, putative, unclassified1.9e-1342.53Show/hide
Query:  SRSSYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWLPRPHSFKIVGYKIYCEEMRAMECVLPTGQWDIPKLQQFLYEDDVQEII
        S SS  W+   +GLDLLKKG+  +VG+G SIR+ RDPWLPR HS + +  K  C      + +   G WD+PK+ Q+ +  D + I+
Subjt:  SRSSYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWLPRPHSFKIVGYKIYCEEMRAMECVLPTGQWDIPKLQQFLYEDDVQEII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein9.4e-0542.22Show/hide
Query:  MLAGVTSRSSYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWL
        M   V +R SY W+  I G +LL +GL R +GDG   +V  D W+
Subjt:  MLAGVTSRSSYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGCGGGAGTAACTTCACGATCCTCCTATTTTTGGAAGGGCTTTATTTGGGGGCTGGATCTATTGAAAAAAGGCCTTCGAAGGCAGGTTGGGGATGGAAGATCTAT
TCGGGTGATGAGGGATCCTTGGTTACCTCGTCCCCATTCCTTTAAAATTGTTGGTTATAAAATATATTGTGAGGAGATGAGAGCAATGGAATGTGTTTTACCGACTGGAC
AATGGGATATTCCAAAGCTTCAACAATTTCTATATGAGGATGATGTTCAGGAAATAATTGAAGGATTGGAATTCCAATTCCGTTACAGCAGAAGCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGGCGGGAGTAACTTCACGATCCTCCTATTTTTGGAAGGGCTTTATTTGGGGGCTGGATCTATTGAAAAAAGGCCTTCGAAGGCAGGTTGGGGATGGAAGATCTAT
TCGGGTGATGAGGGATCCTTGGTTACCTCGTCCCCATTCCTTTAAAATTGTTGGTTATAAAATATATTGTGAGGAGATGAGAGCAATGGAATGTGTTTTACCGACTGGAC
AATGGGATATTCCAAAGCTTCAACAATTTCTATATGAGGATGATGTTCAGGAAATAATTGAAGGATTGGAATTCCAATTCCGTTACAGCAGAAGCAATTGA
Protein sequenceShow/hide protein sequence
MLAGVTSRSSYFWKGFIWGLDLLKKGLRRQVGDGRSIRVMRDPWLPRPHSFKIVGYKIYCEEMRAMECVLPTGQWDIPKLQQFLYEDDVQEIIEGLEFQFRYSRSN