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Lag0025290 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025290
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:10896149..10897929
RNA-Seq ExpressionLag0025290
SyntenyLag0025290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW97660.1 Exocyst complex component SEC8 [Vitis vinifera]3.2e-2134.88Show/hide
Query:  LVINMAKSSMIGINVNDEEMSKWANMFECQAGSLPFNYLGFQLG-------------GGLGVRSLVQRNIALMSKWLWRFFKEENSLWRKVIVSIYGISP
        L IN+AKS +I +    EE+ + A    C+ GSLP  YLG  LG             GGLG+R ++  N AL+ KW+WRF  E+++LW+KV++  YG   
Subjt:  LVINMAKSSMIGINVNDEEMSKWANMFECQAGSLPFNYLGFQLG-------------GGLGVRSLVQRNIALMSKWLWRFFKEENSLWRKVIVSIYGISP

Query:  CGRKTNQFKGKKGNWILVDIVANYPIFEPCIKLTANNGKCIKFWEDCWCDGQPLKLLFSYLFLISNKKEAAI
         G +TN+ +G  G  +  +I+          +     G  IKFW D WCD   L  +F  LF ++ ++ A +
Subjt:  CGRKTNQFKGKKGNWILVDIVANYPIFEPCIKLTANNGKCIKFWEDCWCDGQPLKLLFSYLFLISNKKEAAI

RVX08739.1 putative ribonuclease H protein [Vitis vinifera]1.4e-2134.01Show/hide
Query:  LVINMAKSSMIGINVNDEEMSKWANMFECQAGSLPFNYLGFQLG----------------------------------GGLGVRSLVQRNIALMSKWLWR
        L IN+ KS +I +    E++ + A +F C+ G+LP  YLG  LG                                  GGLG+R L + N AL+ KWLWR
Subjt:  LVINMAKSSMIGINVNDEEMSKWANMFECQAGSLPFNYLGFQLG----------------------------------GGLGVRSLVQRNIALMSKWLWR

Query:  FFKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNWILVDIVANYPIFEPCIKLTANNGKCIKFWEDCWCDGQPLKLLFSYLFLISNKKEAAIADCW
        F  E  SLWRKVIV  +G    G  T + +   G  +  DI   +  F     +   NG+C +FW D W     LK LF  LF I++   A +AD W
Subjt:  FFKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNWILVDIVANYPIFEPCIKLTANNGKCIKFWEDCWCDGQPLKLLFSYLFLISNKKEAAIADCW

XP_018504745.1 PREDICTED: uncharacterized protein LOC108867743 [Pyrus x bretschneideri]1.4e-2138.25Show/hide
Query:  LVINMAKSSMIGINVNDEEMSKWANMFECQAGSL-PFNYL-------GFQLGGGLGVRSLVQRNIALMSKWLWRFFKEENSLWRKVIVSIYGISPCGRKT
        L IN AK SM GIN + E++   A+ + C+ G     N+L         +  GGLGV +L  +N AL++KWLWRF KE NSLW KVI S YG+   G   
Subjt:  LVINMAKSSMIGINVNDEEMSKWANMFECQAGSL-PFNYL-------GFQLGGGLGVRSLVQRNIALMSKWLWRFFKEENSLWRKVIVSIYGISPCGRKT

Query:  NQFKGKKGNWILVDIVANYPIFEPCIKLTANNGKCIKFWEDCWCDGQPLKLLFSYLFLIS---NKKEAAIAD------CWNFE
        N            DI      F  C K    NG+ ++FWED W +G PLK  +  LFL+S   N+  ++  D       WNF+
Subjt:  NQFKGKKGNWILVDIVANYPIFEPCIKLTANNGKCIKFWEDCWCDGQPLKLLFSYLFLIS---NKKEAAIAD------CWNFE

XP_022158566.1 uncharacterized protein LOC111025019 [Momordica charantia]1.4e-2431.39Show/hide
Query:  LVINMAKSSMIGINVNDEEMSKWANMFECQAGSLPFNYLGFQLG--------------------------------------------------------
        L IN+AK+S+IGIN+ + E +   +   C+   + F YLG  LG                                                        
Subjt:  LVINMAKSSMIGINVNDEEMSKWANMFECQAGSLPFNYLGFQLG--------------------------------------------------------

Query:  GGLGVRSLVQRNIALMSKWLWRFFKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNWILVDIVANYPIFEPCIKLTANNGKCIKFWEDCWCDGQPLKLL
        GGLG+ +   +N AL+ KWLW F +EEN+LWR+VI SIYG+   G  T   KGK       DI  N   F+  +   AN G  + FW D W    PL   
Subjt:  GGLGVRSLVQRNIALMSKWLWRFFKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNWILVDIVANYPIFEPCIKLTANNGKCIKFWEDCWCDGQPLKLL

Query:  FSYLFLISNKKEAAIADCWNFES
        F  +F +S K+ A + DCWN E+
Subjt:  FSYLFLISNKKEAAIADCWNFES

XP_025625497.1 uncharacterized protein LOC112717769 [Arachis hypogaea]2.9e-2234.39Show/hide
Query:  MTRLVINMAKSSMIGINVNDEEMSKWANMFECQAGSLPFNYLGFQLG----------GGLGVRSLVQRNIALMSKWLWRFFKEENSLWRKVIVSIYGISP
        M+ L IN  K ++I +N   E +++      CQ  +LP  YLG  LG          GGLGV   V RN AL+ KW WRF KEE  LW+K++ S   ++P
Subjt:  MTRLVINMAKSSMIGINVNDEEMSKWANMFECQAGSLPFNYLGFQLG----------GGLGVRSLVQRNIALMSKWLWRFFKEENSLWRKVIVSIYGISP

Query:  CGRKTNQFKGKKGNWILVDIVANYPIFEPCIK--------LTANNGKCIKFWEDCWCDGQPLKLLFSYLFLISNKKEAAIADCWNFESL
            + Q   ++G       ++  PI E  ++        +   +G+  +FWED W     LK LF  LF+ISN++E+ I DC  ++ L
Subjt:  CGRKTNQFKGKKGNWILVDIVANYPIFEPCIK--------LTANNGKCIKFWEDCWCDGQPLKLLFSYLFLISNKKEAAIADCWNFESL

TrEMBL top hitse value%identityAlignment
A0A2N9GD56 Reverse transcriptase domain-containing protein3.1e-2237.14Show/hide
Query:  MTRLVINMAKSSMIGI-NVNDEEMSKWANMFECQAGSLPFNYLGFQLGG------------GLGVRSLVQRNIALMSKWLWRFFKEENSLWRKVIVSIYG
        +T L +NM KS ++ +  VN+  +S  A++  C+ G+LP  YL   LGG            GLGVR +   N AL+ KW+W F  EE  LWR+VI   YG
Subjt:  MTRLVINMAKSSMIGI-NVNDEEMSKWANMFECQAGSLPFNYLGFQLGG------------GLGVRSLVQRNIALMSKWLWRFFKEENSLWRKVIVSIYG

Query:  ISPCGRKTNQFKGKKGNWILVDIVANYPIFEPCIKLTANNGKCIKFWEDCWCDGQPLKLLFSYLFLISNKKEAAI
        +   G  +   KG  G  +   I++ +  F   +++ A  G  I FW D WC   PLK LF  LF  S+ K A+I
Subjt:  ISPCGRKTNQFKGKKGNWILVDIVANYPIFEPCIKLTANNGKCIKFWEDCWCDGQPLKLLFSYLFLISNKKEAAI

A0A2N9H089 Reverse transcriptase domain-containing protein6.3e-2336.76Show/hide
Query:  MTRLVINMAKSSMIGINVNDEEMSKWANMFECQAGSLPFNYLGFQLG-----------------------GGLGVRSLVQRNIALMSKWLWRFFKEENSL
        +T L +NM KS ++ +      +S+  ++  C+ G LP +YLG  LG                       GGLGVR +   N AL+ KWL+RF +EEN L
Subjt:  MTRLVINMAKSSMIGINVNDEEMSKWANMFECQAGSLPFNYLGFQLG-----------------------GGLGVRSLVQRNIALMSKWLWRFFKEENSL

Query:  WRKVIVSIYGISPCGRKTNQFKGKKGNWILVDIVANYPIFEPCIKLTANNGKCIKFWEDCWCDGQPLKLLFSYLFLISNKKEAAI
        WR+VI + YG+   G  + Q KG  G  +   I+     F   I+L A  G  + FW D WC G PLK LF  LF  S+ K A I
Subjt:  WRKVIVSIYGISPCGRKTNQFKGKKGNWILVDIVANYPIFEPCIKLTANNGKCIKFWEDCWCDGQPLKLLFSYLFLISNKKEAAI

A0A2N9I231 Reverse transcriptase domain-containing protein8.7e-2535.8Show/hide
Query:  DGMTRLVINMAKSSMIGINVNDEEMSKWANMFECQAGSLPFNYLGFQLG-----------GGLGVRSLVQRNIALMSKWLWRFFKEENSLWRKVIVSIYG
        + +T L +NM KS M+ +     ++ + A +  C+ GS+P NYLG  LG           GGLG+R L   N AL+ KWLWRF +E+N LW++V+V+ YG
Subjt:  DGMTRLVINMAKSSMIGINVNDEEMSKWANMFECQAGSLPFNYLGFQLG-----------GGLGVRSLVQRNIALMSKWLWRFFKEENSLWRKVIVSIYG

Query:  ISPCGRKTNQFKGKKGNWILVDIVANYPIFEPCIKLTANNGKCIKFWEDCWCDGQPLKLLFSYLFLISNKKEAAIA
        +   G  T   + + G  +   I+  +  F          G  + FW D WC   PLK ++  LF  SN K+A IA
Subjt:  ISPCGRKTNQFKGKKGNWILVDIVANYPIFEPCIKLTANNGKCIKFWEDCWCDGQPLKLLFSYLFLISNKKEAAIA

A0A2N9J584 UBC core domain-containing protein4.5e-2929.31Show/hide
Query:  EGKILAKDTEIEEEITGFFRRLYEKVHGQRFVLEGVDWSPIDIHHSNKLEEIFSEDEIRRAVNEMGNLKSPGPDG-------------------------
        +G+I     +I+ ++  F+  L+++    R  ++G+++  ID    + LE+ F  +E+ + +  +   K+PGPDG                         
Subjt:  EGKILAKDTEIEEEITGFFRRLYEKVHGQRFVLEGVDWSPIDIHHSNKLEEIFSEDEIRRAVNEMGNLKSPGPDG-------------------------

Query:  ----------------------------MTRLVINMAKSSMIGIN--VNDEEMSKWANMFECQAGSLPFNYLGFQLG--------GGLGVRSLVQRNIAL
                                    +T L +NM KS M+ I   V  E++   A +  C  GSLPF YLG  LG        GGLGVR L+  N AL
Subjt:  ----------------------------MTRLVINMAKSSMIGIN--VNDEEMSKWANMFECQAGSLPFNYLGFQLG--------GGLGVRSLVQRNIAL

Query:  MSKWLWRFFKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNWILVDIVANYPIFEPCIKLTANNGKCIKFWEDCWCDGQPLKLLFSYLF
        + KWLWRF  EE+ LWR+V+V+ YG+   G  TN  +G  G  +   I   + +F          G  + FW+D WC  +PLK +F  LF
Subjt:  MSKWLWRFFKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNWILVDIVANYPIFEPCIKLTANNGKCIKFWEDCWCDGQPLKLLFSYLF

A0A6J1E196 uncharacterized protein LOC1110250196.7e-2531.39Show/hide
Query:  LVINMAKSSMIGINVNDEEMSKWANMFECQAGSLPFNYLGFQLG--------------------------------------------------------
        L IN+AK+S+IGIN+ + E +   +   C+   + F YLG  LG                                                        
Subjt:  LVINMAKSSMIGINVNDEEMSKWANMFECQAGSLPFNYLGFQLG--------------------------------------------------------

Query:  GGLGVRSLVQRNIALMSKWLWRFFKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNWILVDIVANYPIFEPCIKLTANNGKCIKFWEDCWCDGQPLKLL
        GGLG+ +   +N AL+ KWLW F +EEN+LWR+VI SIYG+   G  T   KGK       DI  N   F+  +   AN G  + FW D W    PL   
Subjt:  GGLGVRSLVQRNIALMSKWLWRFFKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNWILVDIVANYPIFEPCIKLTANNGKCIKFWEDCWCDGQPLKLL

Query:  FSYLFLISNKKEAAIADCWNFES
        F  +F +S K+ A + DCWN E+
Subjt:  FSYLFLISNKKEAAIADCWNFES

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.9e-0833.96Show/hide
Query:  GGLGVRSLVQRNIALMSKWLWRFFKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNWI---------LVDIVANYPIFEPCIKLTANNGKCIKFWEDCW
        GGLGVR+    N AL+SK  WR  +E+NSLW  V+   Y +     + +++   KG+W          L D+V++   + P       +G+ I+FW D W
Subjt:  GGLGVRSLVQRNIALMSKWLWRFFKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNWI---------LVDIVANYPIFEPCIKLTANNGKCIKFWEDCW

Query:  CDGQPL
          G+PL
Subjt:  CDGQPL

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein1.4e-0627Show/hide
Query:  FQLGGGLGVRSLVQRNIALMSKWLWRFFKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNWILVDIVANYPIFEPCIKLTANNGKCIKFWEDCWCDGQP
        ++  GG+G + +   N+AL+ K +WR      SL  KV  S Y         N   G + +++   I A+  I     +    NG+ I  W   W D +P
Subjt:  FQLGGGLGVRSLVQRNIALMSKWLWRFFKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNWILVDIVANYPIFEPCIKLTANNGKCIKFWEDCWCDGQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTAGAAGAGGGCAAAATTCTAGCCAAGGACACTGAGATTGAAGAGGAAATTACTGGTTTCTTCAGACGGCTGTATGAGAAAGTCCATGGGCAGCGGTTTGTGCT
TGAAGGAGTGGACTGGTCCCCAATTGATATTCACCATAGTAACAAACTGGAAGAGATTTTCAGTGAAGATGAGATTAGAAGGGCTGTAAACGAGATGGGAAATTTGAAGT
CTCCTGGGCCAGATGGCATGACAAGGCTGGTGATAAACATGGCTAAATCTTCCATGATTGGTATCAATGTCAATGATGAGGAAATGTCCAAATGGGCCAATATGTTTGAA
TGTCAAGCTGGTTCCCTGCCTTTTAACTATTTGGGCTTTCAACTTGGGGGGGGCTTGGGTGTTCGCTCTCTAGTGCAAAGGAACATAGCCCTCATGTCCAAGTGGCTATG
GAGGTTCTTTAAGGAGGAAAATTCGCTTTGGAGGAAGGTTATTGTGAGCATCTATGGGATATCTCCTTGTGGTCGGAAGACCAATCAGTTTAAAGGGAAAAAAGGGAATT
GGATTTTGGTAGACATTGTCGCCAATTACCCTATTTTTGAGCCTTGTATTAAACTCACTGCCAACAATGGTAAGTGCATAAAATTCTGGGAGGACTGTTGGTGTGATGGC
CAACCCCTCAAGCTCCTCTTCTCATACTTGTTCCTCATTTCTAATAAAAAAGAGGCTGCCATTGCAGATTGTTGGAATTTTGAGTCCTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATTAGAAGAGGGCAAAATTCTAGCCAAGGACACTGAGATTGAAGAGGAAATTACTGGTTTCTTCAGACGGCTGTATGAGAAAGTCCATGGGCAGCGGTTTGTGCT
TGAAGGAGTGGACTGGTCCCCAATTGATATTCACCATAGTAACAAACTGGAAGAGATTTTCAGTGAAGATGAGATTAGAAGGGCTGTAAACGAGATGGGAAATTTGAAGT
CTCCTGGGCCAGATGGCATGACAAGGCTGGTGATAAACATGGCTAAATCTTCCATGATTGGTATCAATGTCAATGATGAGGAAATGTCCAAATGGGCCAATATGTTTGAA
TGTCAAGCTGGTTCCCTGCCTTTTAACTATTTGGGCTTTCAACTTGGGGGGGGCTTGGGTGTTCGCTCTCTAGTGCAAAGGAACATAGCCCTCATGTCCAAGTGGCTATG
GAGGTTCTTTAAGGAGGAAAATTCGCTTTGGAGGAAGGTTATTGTGAGCATCTATGGGATATCTCCTTGTGGTCGGAAGACCAATCAGTTTAAAGGGAAAAAAGGGAATT
GGATTTTGGTAGACATTGTCGCCAATTACCCTATTTTTGAGCCTTGTATTAAACTCACTGCCAACAATGGTAAGTGCATAAAATTCTGGGAGGACTGTTGGTGTGATGGC
CAACCCCTCAAGCTCCTCTTCTCATACTTGTTCCTCATTTCTAATAAAAAAGAGGCTGCCATTGCAGATTGTTGGAATTTTGAGTCCTTGTAG
Protein sequenceShow/hide protein sequence
MELEEGKILAKDTEIEEEITGFFRRLYEKVHGQRFVLEGVDWSPIDIHHSNKLEEIFSEDEIRRAVNEMGNLKSPGPDGMTRLVINMAKSSMIGINVNDEEMSKWANMFE
CQAGSLPFNYLGFQLGGGLGVRSLVQRNIALMSKWLWRFFKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNWILVDIVANYPIFEPCIKLTANNGKCIKFWEDCWCDG
QPLKLLFSYLFLISNKKEAAIADCWNFESL