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Lag0025310 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025310
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr10:11163717..11164208
RNA-Seq ExpressionLag0025310
SyntenyLag0025310
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043344.1 hypothetical protein E6C27_scaffold110G002580 [Cucumis melo var. makuwa]4.1e-6275.61Show/hide
Query:  MIPIMQKVSSFTRLLTSDPSPFPSLLLLLLIFTFHVPTCRFFSYLLFT-RPSLYYNCAGHNKVLCNSIAISRPKRLACGGWALRAAPIALLVVVSWLTRE
        MIP+MQKV SFT  LTSDPSPFPSLLL+LLIFTFH+P CRFFSY  F   P  YYNC G++K+LCN I  S P+RL  GGWALRAAPIALLVVVSWL+++
Subjt:  MIPIMQKVSSFTRLLTSDPSPFPSLLLLLLIFTFHVPTCRFFSYLLFT-RPSLYYNCAGHNKVLCNSIAISRPKRLACGGWALRAAPIALLVVVSWLTRE

Query:  DSAGVAAGTWGSQGFRVPTISEHKADAGEIGGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSV
        +SAGVAA  WGSQG  V TISEHKA+  EIGGCTPWVLVG+I+LLFNMAQRQALIRHCLFVRS+
Subjt:  DSAGVAAGTWGSQGFRVPTISEHKADAGEIGGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSV
KAE8653331.1 hypothetical protein Csa_023242 [Cucumis sativus]4.4e-6478.66Show/hide
Query:  MIPIMQKVSSFTRLLTSDPSPFPSLLLLLLIFTFHVPTCRFFSYLLF-TRPSLYYNCAGHNKVLCNSIAISRPKRLACGGWALRAAPIALLVVVSWLTRE
        MIPIMQKVSSFT  LTSDPSPFPSLLLLLLIFTFH+  CRFFSY  F   P  YYNC G++K+LCN I IS P+RL  GGWALRAAPIALLVVVSWL+++
Subjt:  MIPIMQKVSSFTRLLTSDPSPFPSLLLLLLIFTFHVPTCRFFSYLLF-TRPSLYYNCAGHNKVLCNSIAISRPKRLACGGWALRAAPIALLVVVSWLTRE

Query:  DSAGVAAGTWGSQGFRVPTISEHKADAGEIGGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSV
        +SAGVAA  W SQGFRV TISEHKA+  EIGGCTPWVLVGMI+LLFNMAQRQALIRHCLFVRS+
Subjt:  DSAGVAAGTWGSQGFRVPTISEHKADAGEIGGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSV
KAG6573437.1 hypothetical protein SDJN03_27324, partial [Cucurbita argyrosperma subsp. sororia]1.9e-5973.62Show/hide
Query:  MIPIMQKVSSFTRLLTSDPSPFPSLLLLLLIFTFHVPTCRFFSYLLFTRPSLYYNCAGHNKVLCNSIAISRPKRLACGGWALRAAPIALLVVVSWLTRED
        MIPIM K+SS T  LTSDPSPFPSLLLLLLIFT H+PTCRFFSY L   PSLYY+CAG +  LCN +A+S PKRL CGGW+LR APIALLVVVSWLT +D
Subjt:  MIPIMQKVSSFTRLLTSDPSPFPSLLLLLLIFTFHVPTCRFFSYLLFTRPSLYYNCAGHNKVLCNSIAISRPKRLACGGWALRAAPIALLVVVSWLTRED

Query:  SAGVAAGTWGSQGFRVPTI---SEHKADAGEIGGCTPWVLVGMILLLFNMAQRQALIRHCLFV
        + GVAA  WGS+   VPTI    +H+ +A  IGGCTPWVLVGMILLLFNMAQRQALIRHCLFV
Subjt:  SAGVAAGTWGSQGFRVPTI---SEHKADAGEIGGCTPWVLVGMILLLFNMAQRQALIRHCLFV
TrEMBL top hitse value%identityAlignment
A0A0A0LW23 Uncharacterized protein2.6e-6278.12Show/hide
Query:  MQKVSSFTRLLTSDPSPFPSLLLLLLIFTFHVPTCRFFSYLLF-TRPSLYYNCAGHNKVLCNSIAISRPKRLACGGWALRAAPIALLVVVSWLTREDSAG
        MQKVSSFT  LTSDPSPFPSLLLLLLIFTFH+  CRFFSY  F   P  YYNC G++K+LCN I IS P+RL  GGWALRAAPIALLVVVSWL++++SAG
Subjt:  MQKVSSFTRLLTSDPSPFPSLLLLLLIFTFHVPTCRFFSYLLF-TRPSLYYNCAGHNKVLCNSIAISRPKRLACGGWALRAAPIALLVVVSWLTREDSAG

Query:  VAAGTWGSQGFRVPTISEHKADAGEIGGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSV
        VAA  W SQGFRV TISEHKA+  EIGGCTPWVLVGMI+LLFNMAQRQALIRHCLFVRS+
Subjt:  VAAGTWGSQGFRVPTISEHKADAGEIGGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSV
A0A5A7TJ52 Uncharacterized protein2.0e-6275.61Show/hide
Query:  MIPIMQKVSSFTRLLTSDPSPFPSLLLLLLIFTFHVPTCRFFSYLLFT-RPSLYYNCAGHNKVLCNSIAISRPKRLACGGWALRAAPIALLVVVSWLTRE
        MIP+MQKV SFT  LTSDPSPFPSLLL+LLIFTFH+P CRFFSY  F   P  YYNC G++K+LCN I  S P+RL  GGWALRAAPIALLVVVSWL+++
Subjt:  MIPIMQKVSSFTRLLTSDPSPFPSLLLLLLIFTFHVPTCRFFSYLLFT-RPSLYYNCAGHNKVLCNSIAISRPKRLACGGWALRAAPIALLVVVSWLTRE

Query:  DSAGVAAGTWGSQGFRVPTISEHKADAGEIGGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSV
        +SAGVAA  WGSQG  V TISEHKA+  EIGGCTPWVLVG+I+LLFNMAQRQALIRHCLFVRS+
Subjt:  DSAGVAAGTWGSQGFRVPTISEHKADAGEIGGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCCATAATGCAAAAAGTCTCCTCTTTTACACGTTTGCTTACTTCCGATCCCTCACCCTTCCCTTCTCTTCTCCTGCTTCTTCTCATCTTCACCTTCCATGTCCC
AACATGTCGTTTCTTCTCTTACTTACTTTTCACAAGGCCTTCTCTCTACTACAATTGTGCTGGCCATAATAAGGTACTCTGCAATTCCATTGCAATATCCAGACCCAAGA
GGTTGGCTTGTGGTGGTTGGGCTTTACGAGCGGCACCAATTGCCTTACTCGTGGTGGTGAGTTGGTTGACTCGGGAGGACTCGGCAGGAGTCGCTGCTGGGACGTGGGGT
TCTCAGGGCTTCCGTGTTCCGACCATTTCGGAGCACAAGGCAGACGCTGGAGAAATTGGTGGCTGTACTCCTTGGGTTCTTGTGGGAATGATATTGCTGCTATTCAACAT
GGCTCAACGGCAGGCTCTCATTCGGCATTGCTTGTTTGTAAGAAGTGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTCCCATAATGCAAAAAGTCTCCTCTTTTACACGTTTGCTTACTTCCGATCCCTCACCCTTCCCTTCTCTTCTCCTGCTTCTTCTCATCTTCACCTTCCATGTCCC
AACATGTCGTTTCTTCTCTTACTTACTTTTCACAAGGCCTTCTCTCTACTACAATTGTGCTGGCCATAATAAGGTACTCTGCAATTCCATTGCAATATCCAGACCCAAGA
GGTTGGCTTGTGGTGGTTGGGCTTTACGAGCGGCACCAATTGCCTTACTCGTGGTGGTGAGTTGGTTGACTCGGGAGGACTCGGCAGGAGTCGCTGCTGGGACGTGGGGT
TCTCAGGGCTTCCGTGTTCCGACCATTTCGGAGCACAAGGCAGACGCTGGAGAAATTGGTGGCTGTACTCCTTGGGTTCTTGTGGGAATGATATTGCTGCTATTCAACAT
GGCTCAACGGCAGGCTCTCATTCGGCATTGCTTGTTTGTAAGAAGTGTGTGA
Protein sequenceShow/hide protein sequence
MIPIMQKVSSFTRLLTSDPSPFPSLLLLLLIFTFHVPTCRFFSYLLFTRPSLYYNCAGHNKVLCNSIAISRPKRLACGGWALRAAPIALLVVVSWLTREDSAGVAAGTWG
SQGFRVPTISEHKADAGEIGGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSV