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Lag0025348 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025348
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr10:11691343..11692251
RNA-Seq ExpressionLag0025348
SyntenyLag0025348
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_024535949.1 uncharacterized transmembrane protein DDB_G0289901-like [Selaginella moellendorffii]2.8e-0530.7Show/hide
Query:  PTECTHPRDEY-------SSLKRGSGISWASPSFSPEECTHPWDDYDSLKRGSGISWASPSFSPEECTHPWDDYDSLKRGSGISWASPSFSPEECTHPWD
        P     P D Y       S  K GSG +W +P++ P E +   D++ S  +GSG +W +P++ P+    P+    S K G+G +W +P++  ++ T+ W 
Subjt:  PTECTHPRDEY-------SSLKRGSGISWASPSFSPEECTHPWDDYDSLKRGSGISWASPSFSPEECTHPWDDYDSLKRGSGISWASPSFSPEECTHPWD

Query:  DYNSLKRGSGISWP
              +GSG +WP
Subjt:  DYNSLKRGSGISWP
XP_024538343.1 protein RNA-directed DNA methylation 3-like [Selaginella moellendorffii]2.8e-0530.7Show/hide
Query:  PTECTHPRDEY-------SSLKRGSGISWASPSFSPEECTHPWDDYDSLKRGSGISWASPSFSPEECTHPWDDYDSLKRGSGISWASPSFSPEECTHPWD
        P     P D Y       S  K GSG +W +P++ P E +   D++ S  +GSG +W +P++ P+    P+    S K G+G +W +P++  ++ T+ W 
Subjt:  PTECTHPRDEY-------SSLKRGSGISWASPSFSPEECTHPWDDYDSLKRGSGISWASPSFSPEECTHPWDDYDSLKRGSGISWASPSFSPEECTHPWD

Query:  DYNSLKRGSGISWP
              +GSG +WP
Subjt:  DYNSLKRGSGISWP
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCAACCTCCGGGTCCCCAACAGAGTGTATGCACCACTGGGATGAATACAACAGCTTGAAGAGAGACTCGGAAATTTCCTCGACCTCCCCAAGTTTTCTCCGACT
AAGTGCATGCACCCTTGGGATGGAAAACAAGCAAACGAACAGCATAGAGGAGCTGGTCGGCCTCATGCCAAGGTCGAGGCCGACCATCCAGAGGCCAAGGCCGAGCTCTA
CCCTTAGAGGCCCAGACGGGAATGATCCTTGTAGAGGCCAGACTTCCGCACTTCCCCCGACTGAGTGTACGCACCCTCGGGATGAATACAGCAGCTTGAAGAGAGGCTCG
GGAATTTCCTGGGCCTCCCCAAGCTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACTATGACAGCTTGAAGAGAGGCTCGGGAATTTCCTGGGCCTCCCCAAGCTT
TTCCCCAGAAGAGTGTACGCACCCCTGGGATGACTATGACAGCTTGAAGAGAGGCTCGGGAATTTCTTGGGCCTCCCCAAGCTTTTCCCCAGAAGAGTGTACGCACCCCT
GGGATGACTATAACAGCTTGAAGAGAGGCTCGGGAATTTCCTGGCCTCCCCAAGCTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACTATGACAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTCAACCTCCGGGTCCCCAACAGAGTGTATGCACCACTGGGATGAATACAACAGCTTGAAGAGAGACTCGGAAATTTCCTCGACCTCCCCAAGTTTTCTCCGACT
AAGTGCATGCACCCTTGGGATGGAAAACAAGCAAACGAACAGCATAGAGGAGCTGGTCGGCCTCATGCCAAGGTCGAGGCCGACCATCCAGAGGCCAAGGCCGAGCTCTA
CCCTTAGAGGCCCAGACGGGAATGATCCTTGTAGAGGCCAGACTTCCGCACTTCCCCCGACTGAGTGTACGCACCCTCGGGATGAATACAGCAGCTTGAAGAGAGGCTCG
GGAATTTCCTGGGCCTCCCCAAGCTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACTATGACAGCTTGAAGAGAGGCTCGGGAATTTCCTGGGCCTCCCCAAGCTT
TTCCCCAGAAGAGTGTACGCACCCCTGGGATGACTATGACAGCTTGAAGAGAGGCTCGGGAATTTCTTGGGCCTCCCCAAGCTTTTCCCCAGAAGAGTGTACGCACCCCT
GGGATGACTATAACAGCTTGAAGAGAGGCTCGGGAATTTCCTGGCCTCCCCAAGCTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACTATGACAGCTTGA
Protein sequenceShow/hide protein sequence
MSSTSGSPTECMHHWDEYNSLKRDSEISSTSPSFLRLSACTLGMENKQTNSIEELVGLMPRSRPTIQRPRPSSTLRGPDGNDPCRGQTSALPPTECTHPRDEYSSLKRGS
GISWASPSFSPEECTHPWDDYDSLKRGSGISWASPSFSPEECTHPWDDYDSLKRGSGISWASPSFSPEECTHPWDDYNSLKRGSGISWPPQAFPQKSVRTPGMTMTA