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Lag0025349 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025349
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionmyb-like transcription factor family protein
Genome locationchr10:11702878..11703514
RNA-Seq ExpressionLag0025349
SyntenyLag0025349
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain
IPR044787 - Myb family transcription factor HRS1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141926.1 transcription factor HHO5 [Cucumis sativus]5.0e-4086.79Show/hide
Query:  MTPISDPFLVNLTVKNGGN-----RAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKS
        MTPISDPF VNLTVKNGGN     RAAVSGLSSPA Q+KGQ KLSQQQQTIRKQRRCWSPELHRRFVDALH+LGGSQVATPKQI ELMQVD LTNDEVKS
Subjt:  MTPISDPFLVNLTVKNGGN-----RAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKS

Query:  HLQGSR
        HLQ  R
Subjt:  HLQGSR

XP_008440244.1 PREDICTED: uncharacterized protein LOC103484758 [Cucumis melo]3.8e-4086.79Show/hide
Query:  MTPISDPFLVNLTVKNGGN-----RAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKS
        MTPISDPF VNLTVKNGGN     RAAVSGLSSPA Q+KGQ KLSQQQQTIRKQRRCWSPELHRRFVDALH+LGGSQVATPKQI ELMQVD LTNDEVKS
Subjt:  MTPISDPFLVNLTVKNGGN-----RAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKS

Query:  HLQGSR
        HLQ  R
Subjt:  HLQGSR

XP_022133033.1 transcription factor HHO5 [Momordica charantia]4.2e-3979.82Show/hide
Query:  MTPISDPFLVNLTVKNGGN--RAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQ
        MTPISDPF VNLTVKN G   RAAV GLSSPAAQ+K QTKLSQQQQTIRKQRRCWSPELHRRFVDALH+LGGSQVATPKQI ELMQVD LTNDEVKSHLQ
Subjt:  MTPISDPFLVNLTVKNGGN--RAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQ

Query:  GSRRKENSKVTVGL
           + +++   +GL
Subjt:  GSRRKENSKVTVGL

XP_023003590.1 transcription factor HHO5-like [Cucurbita maxima]6.7e-3781.73Show/hide
Query:  MTPISDPFLVNLTVKNG---GNRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHL
        MTPISDPF  NLT+KNG   G+ A+VSGLSSPAAQ+ G  KLSQ QQTIRKQRRCWSPELHRRFVDALH+LGGSQVATPKQI ELMQVD LTNDEVKSHL
Subjt:  MTPISDPFLVNLTVKNG---GNRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHL

Query:  QGSR
        Q  R
Subjt:  QGSR

XP_038881045.1 transcription factor HHO5 [Benincasa hispida]9.4e-3984.91Show/hide
Query:  MTPISDPFLVNLTVKNGG-----NRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKS
        MTPISDPF V+LTVK+GG      RAAVSGLSSPAAQ+KGQ KLSQQQQTIRKQRRCWSPELHRRFVDALH+LGGSQVATPKQI ELMQVD LTNDEVKS
Subjt:  MTPISDPFLVNLTVKNGG-----NRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKS

Query:  HLQGSR
        HLQ  R
Subjt:  HLQGSR

TrEMBL top hitse value%identityAlignment
A0A0A0KIA9 HTH myb-type domain-containing protein2.4e-4086.79Show/hide
Query:  MTPISDPFLVNLTVKNGGN-----RAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKS
        MTPISDPF VNLTVKNGGN     RAAVSGLSSPA Q+KGQ KLSQQQQTIRKQRRCWSPELHRRFVDALH+LGGSQVATPKQI ELMQVD LTNDEVKS
Subjt:  MTPISDPFLVNLTVKNGGN-----RAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKS

Query:  HLQGSR
        HLQ  R
Subjt:  HLQGSR

A0A1S3B0P5 uncharacterized protein LOC1034847581.8e-4086.79Show/hide
Query:  MTPISDPFLVNLTVKNGGN-----RAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKS
        MTPISDPF VNLTVKNGGN     RAAVSGLSSPA Q+KGQ KLSQQQQTIRKQRRCWSPELHRRFVDALH+LGGSQVATPKQI ELMQVD LTNDEVKS
Subjt:  MTPISDPFLVNLTVKNGGN-----RAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKS

Query:  HLQGSR
        HLQ  R
Subjt:  HLQGSR

A0A6J1BXV9 transcription factor HHO52.0e-3979.82Show/hide
Query:  MTPISDPFLVNLTVKNGGN--RAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQ
        MTPISDPF VNLTVKN G   RAAV GLSSPAAQ+K QTKLSQQQQTIRKQRRCWSPELHRRFVDALH+LGGSQVATPKQI ELMQVD LTNDEVKSHLQ
Subjt:  MTPISDPFLVNLTVKNGGN--RAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQ

Query:  GSRRKENSKVTVGL
           + +++   +GL
Subjt:  GSRRKENSKVTVGL

A0A6J1HJL6 transcription factor HHO5-like isoform X19.5e-3781.73Show/hide
Query:  MTPISDPFLVNLTVKNG---GNRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHL
        MTPISDPF  NLT+KNG   G+ A+VSGLSSPAAQ+ G  KLSQ QQTIRKQRRCWSPELHRRFVDALH+LGGSQVATPKQI ELMQVD LTNDEVKSHL
Subjt:  MTPISDPFLVNLTVKNG---GNRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHL

Query:  QGSR
        Q  R
Subjt:  QGSR

A0A6J1KS63 transcription factor HHO5-like3.3e-3781.73Show/hide
Query:  MTPISDPFLVNLTVKNG---GNRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHL
        MTPISDPF  NLT+KNG   G+ A+VSGLSSPAAQ+ G  KLSQ QQTIRKQRRCWSPELHRRFVDALH+LGGSQVATPKQI ELMQVD LTNDEVKSHL
Subjt:  MTPISDPFLVNLTVKNG---GNRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHL

Query:  QGSR
        Q  R
Subjt:  QGSR

SwissProt top hitse value%identityAlignment
Q5VRW2 Transcription factor NIGTH11.9e-1862.65Show/hide
Query:  NRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQGSR
        +R A +G   P+    GQ  +    Q  RK RRCWSPELHRRFV+AL  LGG+QVATPKQI ELM+VD LTNDEVKSHLQ  R
Subjt:  NRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQGSR

Q8VZS3 Transcription factor HHO22.5e-1869.57Show/hide
Query:  QTKLSQQQ---QTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQGSR
        + ++ QQQ    T RKQRRCWSPELHRRF++AL QLGGS VATPKQI + M+VD LTNDEVKSHLQ  R
Subjt:  QTKLSQQQ---QTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQGSR

Q9FPE8 Transcription factor HHO33.0e-1967.53Show/hide
Query:  SSPAAQVKGQTKLSQQQQ--TIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQGSR
        SS A  V G  +  +Q+Q  + RKQRRCWSPELHRRF+ AL QLGGS VATPKQI +LM+VD LTNDEVKSHLQ  R
Subjt:  SSPAAQVKGQTKLSQQQQ--TIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQGSR

Q9FX84 Transcription factor HHO61.1e-1860.47Show/hide
Query:  SGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQGSR---RKENS
        + +  P      Q     +QQ +RKQRRCW+PELHRRFVDAL QLGG  VATPKQI E MQ + LTNDEVKSHLQ  R   RK NS
Subjt:  SGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQGSR---RKENS

Q9ZQ85 Myb family transcription factor EFM1.9e-1875.81Show/hide
Query:  SQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQGSR
        S   Q+ RK RRCWSP+LHRRFV AL  LGGSQVATPKQI ELM+VD LTNDEVKSHLQ  R
Subjt:  SQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQGSR

Arabidopsis top hitse value%identityAlignment
AT1G25550.1 myb-like transcription factor family protein2.1e-2067.53Show/hide
Query:  SSPAAQVKGQTKLSQQQQ--TIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQGSR
        SS A  V G  +  +Q+Q  + RKQRRCWSPELHRRF+ AL QLGGS VATPKQI +LM+VD LTNDEVKSHLQ  R
Subjt:  SSPAAQVKGQTKLSQQQQ--TIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQGSR

AT1G49560.1 Homeodomain-like superfamily protein8.0e-2060.47Show/hide
Query:  SGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQGSR---RKENS
        + +  P      Q     +QQ +RKQRRCW+PELHRRFVDAL QLGG  VATPKQI E MQ + LTNDEVKSHLQ  R   RK NS
Subjt:  SGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQGSR---RKENS

AT1G68670.1 myb-like transcription factor family protein1.8e-1969.57Show/hide
Query:  QTKLSQQQ---QTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQGSR
        + ++ QQQ    T RKQRRCWSPELHRRF++AL QLGGS VATPKQI + M+VD LTNDEVKSHLQ  R
Subjt:  QTKLSQQQ---QTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQGSR

AT2G03500.1 Homeodomain-like superfamily protein1.4e-1975.81Show/hide
Query:  SQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQGSR
        S   Q+ RK RRCWSP+LHRRFV AL  LGGSQVATPKQI ELM+VD LTNDEVKSHLQ  R
Subjt:  SQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQGSR

AT4G37180.2 Homeodomain-like superfamily protein9.8e-1871.21Show/hide
Query:  KLSQQQQTIRK--QRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQGSR
        K S Q   I+K  QRR WS ELHR+FVDALH+LGG QVATPKQI +LM+VD LTNDEVKSHLQ  R
Subjt:  KLSQQQQTIRK--QRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQGSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCCAATCTCCGATCCCTTTCTTGTTAATTTGACCGTCAAGAACGGCGGCAACAGAGCTGCTGTTTCTGGGTTGTCTTCGCCGGCGGCGCAAGTGAAAGGACAGAC
AAAATTGTCCCAACAGCAACAGACCATAAGAAAACAGAGAAGATGCTGGTCGCCGGAGCTCCACCGGCGCTTCGTCGACGCACTGCACCAACTCGGCGGATCTCAAGTGG
CAACACCAAAACAGATAATGGAATTGATGCAAGTGGACGACCTCACCAACGACGAAGTGAAAAGCCATTTACAAGGATCTCGCCGGAAAGAAAATTCGAAAGTTACAGTC
GGTTTGGATTTTATCGAAAGGATCTTTCTTAGATTTCAGAGTTTGGATCTCATATTTTACCGATTAATTGCAGGTCTGGATTCATGGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCCCAATCTCCGATCCCTTTCTTGTTAATTTGACCGTCAAGAACGGCGGCAACAGAGCTGCTGTTTCTGGGTTGTCTTCGCCGGCGGCGCAAGTGAAAGGACAGAC
AAAATTGTCCCAACAGCAACAGACCATAAGAAAACAGAGAAGATGCTGGTCGCCGGAGCTCCACCGGCGCTTCGTCGACGCACTGCACCAACTCGGCGGATCTCAAGTGG
CAACACCAAAACAGATAATGGAATTGATGCAAGTGGACGACCTCACCAACGACGAAGTGAAAAGCCATTTACAAGGATCTCGCCGGAAAGAAAATTCGAAAGTTACAGTC
GGTTTGGATTTTATCGAAAGGATCTTTCTTAGATTTCAGAGTTTGGATCTCATATTTTACCGATTAATTGCAGGTCTGGATTCATGGGTTTGA
Protein sequenceShow/hide protein sequence
MTPISDPFLVNLTVKNGGNRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHQLGGSQVATPKQIMELMQVDDLTNDEVKSHLQGSRRKENSKVTV
GLDFIERIFLRFQSLDLIFYRLIAGLDSWV