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Lag0025373 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025373
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr10:11961564..11962334
RNA-Seq ExpressionLag0025373
SyntenyLag0025373
Gene Ontology termsNA
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033232.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]4.8e-3357.14Show/hide
Query:  IRAIAIRDNFQFKTVKSNRDVLAVQCVVEHCEWFLRA--CRFGDDVSPTLVVKRFDSEHTCSIDVVLTDHKQTTITFIKDCIKRKISITTSELPTPKDIL
        ++AIA+RDNFQ+  VKSN++V+ +QC +E+C+  L A  C  GD      V+ R+DSEHTCS+DV LTDH+  T T IKD IK KI +  SEL TPKDI+
Subjt:  IRAIAIRDNFQFKTVKSNRDVLAVQCVVEHCEWFLRA--CRFGDDVSPTLVVKRFDSEHTCSIDVVLTDHKQTTITFIKDCIKRKISITTSELPTPKDIL

Query:  SFIRSKYGLCTSYQKAWRAREAALNEIRGSPED
         +IR+++GL   YQ AWRAREAAL+EI GSPED
Subjt:  SFIRSKYGLCTSYQKAWRAREAALNEIRGSPED

KAA0051302.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]1.5e-3460.61Show/hide
Query:  IRAIAIRDNFQFKTVKSNRDVLAVQCVVEHCEWFLRA-CRFGDDVSPTLVVKRFDSEHTCSIDVVLTDHKQTTITFIKDCIKRKISITTSELPTPKDILS
        ++AIA+RDNFQ+ TVKSN++V+ +QC +++ +W LRA C    D S   VV RFD EHTCS+DV LTDH+Q T T IKD IK KIS+  SEL T KDI+ 
Subjt:  IRAIAIRDNFQFKTVKSNRDVLAVQCVVEHCEWFLRA-CRFGDDVSPTLVVKRFDSEHTCSIDVVLTDHKQTTITFIKDCIKRKISITTSELPTPKDILS

Query:  FIRSKYGLCTSYQKAWRAREAALNEIRGSPED
        FIR+K+GL  SYQKAWRA EA L++IRGS ED
Subjt:  FIRSKYGLCTSYQKAWRAREAALNEIRGSPED

KAA0060121.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]5.7e-3457.14Show/hide
Query:  IRAIAIRDNFQFKTVKSNRDVLAVQCVVEHCEWFLRA--CRFGDDVSPTLVVKRFDSEHTCSIDVVLTDHKQTTITFIKDCIKRKISITTSELPTPKDIL
        ++AIAIRDNFQ+  VKSN++V+ +QC +E+C+W LRA  C  GD      V+ RFDSEHTC +DV L+D++Q T T  KD IK KIS+   EL T KDI+
Subjt:  IRAIAIRDNFQFKTVKSNRDVLAVQCVVEHCEWFLRA--CRFGDDVSPTLVVKRFDSEHTCSIDVVLTDHKQTTITFIKDCIKRKISITTSELPTPKDIL

Query:  SFIRSKYGLCTSYQKAWRAREAALNEIRGSPED
         FIR+++GL  SYQKAWRA E AL++IRGSP+D
Subjt:  SFIRSKYGLCTSYQKAWRAREAALNEIRGSPED

XP_022134813.1 uncharacterized protein LOC111006994 [Momordica charantia]8.5e-3834.63Show/hide
Query:  MTFIEFQECIIQNQGCLGNLEVPKLFVSIGSKIFIKNDAEITEDKDIRWLFRIASNNVEQYC--------------------------------------
        M++    E I++  G +G+ + P +F  +G+  FIK D +I++DKD+ WL+ I SN   Q C                                      
Subjt:  MTFIEFQECIIQNQGCLGNLEVPKLFVSIGSKIFIKNDAEITEDKDIRWLFRIASNNVEQYC--------------------------------------

Query:  ------------------------DNVIRAIAIRDNFQFKTVKSNRDVLAVQCVVEHCEWFLRACRFGDDVSPTLVVKRFDSEHTCSIDVVLTDHKQTTI
                                 N +R++AIR NF F+TVKSNR+VL V C+  +C+WFL A +FGD  S   +VK+F  EHTCS+++VL DH+Q T 
Subjt:  ------------------------DNVIRAIAIRDNFQFKTVKSNRDVLAVQCVVEHCEWFLRACRFGDDVSPTLVVKRFDSEHTCSIDVVLTDHKQTTI

Query:  TFIKDCIKRKISITTSELPTPKDILSFIRSKYGLCTSYQKAWRAREAALNEIRGSPE
        + IK+ IK +I+   ++LP+ KD +S +  +  +  +YQKA  ARE A+ EIRGSPE
Subjt:  TFIKDCIKRKISITTSELPTPKDILSFIRSKYGLCTSYQKAWRAREAALNEIRGSPE

XP_022155207.1 uncharacterized protein LOC111022347 [Momordica charantia]2.9e-3833.33Show/hide
Query:  MTFIEFQECIIQNQGCLGNLEVPKLFVSIGSKIFIKNDAEITEDKDIRWLFRIASNNVEQYC--------------------------------------
        M++ +  + I++  G +G+ + P +F  IG+  F+K D +I++DKD+ WL+ +  N V Q C                                      
Subjt:  MTFIEFQECIIQNQGCLGNLEVPKLFVSIGSKIFIKNDAEITEDKDIRWLFRIASNNVEQYC--------------------------------------

Query:  ------------------------DNVIRAIAIRDNFQFKTVKSNRDVLAVQCVVEHCEWFLRACRFGDDVSPTLVVKRFDSEHTCSIDVVLTDHKQTTI
                                 N +R++AIRDNFQF+T+KSNRDVL V+  +++C+W+L A +FGD  S   +VK+F  EHTCS+++VL DH+Q T 
Subjt:  ------------------------DNVIRAIAIRDNFQFKTVKSNRDVLAVQCVVEHCEWFLRACRFGDDVSPTLVVKRFDSEHTCSIDVVLTDHKQTTI

Query:  TFIKDCIKRKISITTSELPTPKDILSFIRSKYGLCTSYQKAWRAREAALNEIRGSPED
        + IK+ IK + ++  ++L + KD++S +R   G+  +YQKAWR R++A+ EI+GSPE+
Subjt:  TFIKDCIKRKISITTSELPTPKDILSFIRSKYGLCTSYQKAWRAREAALNEIRGSPED

TrEMBL top hitse value%identityAlignment
A0A5A7U620 Protein FAR-RED ELONGATED HYPOCOTYL 3-like7.3e-3560.61Show/hide
Query:  IRAIAIRDNFQFKTVKSNRDVLAVQCVVEHCEWFLRA-CRFGDDVSPTLVVKRFDSEHTCSIDVVLTDHKQTTITFIKDCIKRKISITTSELPTPKDILS
        ++AIA+RDNFQ+ TVKSN++V+ +QC +++ +W LRA C    D S   VV RFD EHTCS+DV LTDH+Q T T IKD IK KIS+  SEL T KDI+ 
Subjt:  IRAIAIRDNFQFKTVKSNRDVLAVQCVVEHCEWFLRA-CRFGDDVSPTLVVKRFDSEHTCSIDVVLTDHKQTTITFIKDCIKRKISITTSELPTPKDILS

Query:  FIRSKYGLCTSYQKAWRAREAALNEIRGSPED
        FIR+K+GL  SYQKAWRA EA L++IRGS ED
Subjt:  FIRSKYGLCTSYQKAWRAREAALNEIRGSPED

A0A5A7V2Y2 Protein FAR-RED ELONGATED HYPOCOTYL 3-like2.8e-3457.14Show/hide
Query:  IRAIAIRDNFQFKTVKSNRDVLAVQCVVEHCEWFLRA--CRFGDDVSPTLVVKRFDSEHTCSIDVVLTDHKQTTITFIKDCIKRKISITTSELPTPKDIL
        ++AIAIRDNFQ+  VKSN++V+ +QC +E+C+W LRA  C  GD      V+ RFDSEHTC +DV L+D++Q T T  KD IK KIS+   EL T KDI+
Subjt:  IRAIAIRDNFQFKTVKSNRDVLAVQCVVEHCEWFLRA--CRFGDDVSPTLVVKRFDSEHTCSIDVVLTDHKQTTITFIKDCIKRKISITTSELPTPKDIL

Query:  SFIRSKYGLCTSYQKAWRAREAALNEIRGSPED
         FIR+++GL  SYQKAWRA E AL++IRGSP+D
Subjt:  SFIRSKYGLCTSYQKAWRAREAALNEIRGSPED

A0A5D3BGB6 Protein FAR-RED ELONGATED HYPOCOTYL 3-like2.3e-3357.14Show/hide
Query:  IRAIAIRDNFQFKTVKSNRDVLAVQCVVEHCEWFLRA--CRFGDDVSPTLVVKRFDSEHTCSIDVVLTDHKQTTITFIKDCIKRKISITTSELPTPKDIL
        ++AIA+RDNFQ+  VKSN++V+ +QC +E+C+  L A  C  GD      V+ R+DSEHTCS+DV LTDH+  T T IKD IK KI +  SEL TPKDI+
Subjt:  IRAIAIRDNFQFKTVKSNRDVLAVQCVVEHCEWFLRA--CRFGDDVSPTLVVKRFDSEHTCSIDVVLTDHKQTTITFIKDCIKRKISITTSELPTPKDIL

Query:  SFIRSKYGLCTSYQKAWRAREAALNEIRGSPED
         +IR+++GL   YQ AWRAREAAL+EI GSPED
Subjt:  SFIRSKYGLCTSYQKAWRAREAALNEIRGSPED

A0A6J1C328 uncharacterized protein LOC1110069944.1e-3834.63Show/hide
Query:  MTFIEFQECIIQNQGCLGNLEVPKLFVSIGSKIFIKNDAEITEDKDIRWLFRIASNNVEQYC--------------------------------------
        M++    E I++  G +G+ + P +F  +G+  FIK D +I++DKD+ WL+ I SN   Q C                                      
Subjt:  MTFIEFQECIIQNQGCLGNLEVPKLFVSIGSKIFIKNDAEITEDKDIRWLFRIASNNVEQYC--------------------------------------

Query:  ------------------------DNVIRAIAIRDNFQFKTVKSNRDVLAVQCVVEHCEWFLRACRFGDDVSPTLVVKRFDSEHTCSIDVVLTDHKQTTI
                                 N +R++AIR NF F+TVKSNR+VL V C+  +C+WFL A +FGD  S   +VK+F  EHTCS+++VL DH+Q T 
Subjt:  ------------------------DNVIRAIAIRDNFQFKTVKSNRDVLAVQCVVEHCEWFLRACRFGDDVSPTLVVKRFDSEHTCSIDVVLTDHKQTTI

Query:  TFIKDCIKRKISITTSELPTPKDILSFIRSKYGLCTSYQKAWRAREAALNEIRGSPE
        + IK+ IK +I+   ++LP+ KD +S +  +  +  +YQKA  ARE A+ EIRGSPE
Subjt:  TFIKDCIKRKISITTSELPTPKDILSFIRSKYGLCTSYQKAWRAREAALNEIRGSPE

A0A6J1DNQ8 uncharacterized protein LOC1110223471.4e-3833.33Show/hide
Query:  MTFIEFQECIIQNQGCLGNLEVPKLFVSIGSKIFIKNDAEITEDKDIRWLFRIASNNVEQYC--------------------------------------
        M++ +  + I++  G +G+ + P +F  IG+  F+K D +I++DKD+ WL+ +  N V Q C                                      
Subjt:  MTFIEFQECIIQNQGCLGNLEVPKLFVSIGSKIFIKNDAEITEDKDIRWLFRIASNNVEQYC--------------------------------------

Query:  ------------------------DNVIRAIAIRDNFQFKTVKSNRDVLAVQCVVEHCEWFLRACRFGDDVSPTLVVKRFDSEHTCSIDVVLTDHKQTTI
                                 N +R++AIRDNFQF+T+KSNRDVL V+  +++C+W+L A +FGD  S   +VK+F  EHTCS+++VL DH+Q T 
Subjt:  ------------------------DNVIRAIAIRDNFQFKTVKSNRDVLAVQCVVEHCEWFLRACRFGDDVSPTLVVKRFDSEHTCSIDVVLTDHKQTTI

Query:  TFIKDCIKRKISITTSELPTPKDILSFIRSKYGLCTSYQKAWRAREAALNEIRGSPED
        + IK+ IK + ++  ++L + KD++S +R   G+  +YQKAWR R++A+ EI+GSPE+
Subjt:  TFIKDCIKRKISITTSELPTPKDILSFIRSKYGLCTSYQKAWRAREAALNEIRGSPED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTTTATTGAGTTTCAAGAGTGTATCATACAGAATCAGGGTTGTTTAGGTAATTTGGAAGTCCCTAAGTTATTTGTTAGCATAGGCTCCAAAATTTTCATAAAGAA
TGATGCAGAGATCACTGAAGATAAGGACATAAGATGGTTGTTTAGAATAGCCTCAAACAATGTTGAGCAGTACTGTGATAATGTTATTCGAGCTATTGCCATTAGAGACA
ACTTCCAATTCAAAACTGTCAAATCTAACCGTGATGTTTTGGCTGTGCAATGTGTGGTCGAGCATTGTGAGTGGTTCCTTCGAGCATGTAGGTTTGGTGATGATGTTAGT
CCCACTTTGGTTGTCAAGAGATTTGACAGTGAACATACGTGTTCGATTGATGTTGTATTGACTGATCACAAGCAAACGACAATTACATTCATAAAGGATTGCATTAAGCG
GAAGATTAGCATTACGACTAGTGAATTACCCACTCCTAAAGACATTCTATCATTCATCCGATCGAAATATGGATTGTGTACTAGTTACCAAAAGGCTTGGCGTGCTCGTG
AAGCTGCATTAAATGAGATTAGAGGATCTCCAGAAGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTTTTATTGAGTTTCAAGAGTGTATCATACAGAATCAGGGTTGTTTAGGTAATTTGGAAGTCCCTAAGTTATTTGTTAGCATAGGCTCCAAAATTTTCATAAAGAA
TGATGCAGAGATCACTGAAGATAAGGACATAAGATGGTTGTTTAGAATAGCCTCAAACAATGTTGAGCAGTACTGTGATAATGTTATTCGAGCTATTGCCATTAGAGACA
ACTTCCAATTCAAAACTGTCAAATCTAACCGTGATGTTTTGGCTGTGCAATGTGTGGTCGAGCATTGTGAGTGGTTCCTTCGAGCATGTAGGTTTGGTGATGATGTTAGT
CCCACTTTGGTTGTCAAGAGATTTGACAGTGAACATACGTGTTCGATTGATGTTGTATTGACTGATCACAAGCAAACGACAATTACATTCATAAAGGATTGCATTAAGCG
GAAGATTAGCATTACGACTAGTGAATTACCCACTCCTAAAGACATTCTATCATTCATCCGATCGAAATATGGATTGTGTACTAGTTACCAAAAGGCTTGGCGTGCTCGTG
AAGCTGCATTAAATGAGATTAGAGGATCTCCAGAAGACTAG
Protein sequenceShow/hide protein sequence
MTFIEFQECIIQNQGCLGNLEVPKLFVSIGSKIFIKNDAEITEDKDIRWLFRIASNNVEQYCDNVIRAIAIRDNFQFKTVKSNRDVLAVQCVVEHCEWFLRACRFGDDVS
PTLVVKRFDSEHTCSIDVVLTDHKQTTITFIKDCIKRKISITTSELPTPKDILSFIRSKYGLCTSYQKAWRAREAALNEIRGSPED