; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025378 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025378
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr10:12050872..12051366
RNA-Seq ExpressionLag0025378
SyntenyLag0025378
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]1.2e-2958.56Show/hide
Query:  MKLGSEHLKPSLTPLVGFGGDKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCVPVYNAILGRPTLHGIKAVASTYHQVLKFPTEEGVGAVCGEQRMSRE
        M LG + LK S  PLVGFGG++V P G +E PVTFG G ++VT+MV+ LVV+    YNAILGRPT+H ++A+ STYHQ +KFPT  GVG + GEQR+SRE
Subjt:  MKLGSEHLKPSLTPLVGFGGDKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCVPVYNAILGRPTLHGIKAVASTYHQVLKFPTEEGVGAVCGEQRMSRE

Query:  CYFMALRNIDR
        CY+ ++R+ DR
Subjt:  CYFMALRNIDR

XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]7.2e-3056.76Show/hide
Query:  MKLGSEHLKPSLTPLVGFGGDKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCVPVYNAILGRPTLHGIKAVASTYHQVLKFPTEEGVGAVCGEQRMSRE
        M LG E LK SLTPL+GFGG+++ P+G +ELP+TF    +++TRMV+FLVVD    YN IL RPT+H ++A+ STYHQ +KFPT  GVG + GEQR+SRE
Subjt:  MKLGSEHLKPSLTPLVGFGGDKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCVPVYNAILGRPTLHGIKAVASTYHQVLKFPTEEGVGAVCGEQRMSRE

Query:  CYFMALRNIDR
        CY+ ++R  D+
Subjt:  CYFMALRNIDR

XP_022150858.1 uncharacterized protein LOC111018902 [Momordica charantia]1.3e-2856.76Show/hide
Query:  MKLGSEHLKPSLTPLVGFGGDKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCVPVYNAILGRPTLHGIKAVASTYHQVLKFPTEEGVGAVCGEQRMSRE
        M LG   LK S  PLVGFGG+ V P G +ELPVTFG G +++T+MV+FLVVD     NAILGRPT+H +KA+ S YHQ +KFPT  G+G + GEQR+SRE
Subjt:  MKLGSEHLKPSLTPLVGFGGDKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCVPVYNAILGRPTLHGIKAVASTYHQVLKFPTEEGVGAVCGEQRMSRE

Query:  CYFMALRNIDR
        CY+ +++  D+
Subjt:  CYFMALRNIDR

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]2.1e-2960.36Show/hide
Query:  MKLGSEHLKPSLTPLVGFGGDKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCVPVYNAILGRPTLHGIKAVASTYHQVLKFPTEEGVGAVCGEQRMSRE
        M LG + LK S  PLVGFGG++V   G +ELPVTFG G ++VT+MV+FLVV+    YNAILGRPT+H +KA+ STYHQ  KFPT  GVG + GEQR+SRE
Subjt:  MKLGSEHLKPSLTPLVGFGGDKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCVPVYNAILGRPTLHGIKAVASTYHQVLKFPTEEGVGAVCGEQRMSRE

Query:  CYFMALRNIDR
        CY  ++R+ DR
Subjt:  CYFMALRNIDR

XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]1.3e-2857.66Show/hide
Query:  MKLGSEHLKPSLTPLVGFGGDKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCVPVYNAILGRPTLHGIKAVASTYHQVLKFPTEEGVGAVCGEQRMSRE
        M LG + LK S  PL+GFG ++V P G +EL VTFG G ++VT+M++FLVVD    YNAILGR T+H +KA+ STYHQ +KFPT  GVG + GEQR+SRE
Subjt:  MKLGSEHLKPSLTPLVGFGGDKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCVPVYNAILGRPTLHGIKAVASTYHQVLKFPTEEGVGAVCGEQRMSRE

Query:  CYFMALRNIDR
        CY+ ++R  DR
Subjt:  CYFMALRNIDR

TrEMBL top hitse value%identityAlignment
A0A6J1CTS4 uncharacterized protein LOC1110141475.9e-3058.56Show/hide
Query:  MKLGSEHLKPSLTPLVGFGGDKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCVPVYNAILGRPTLHGIKAVASTYHQVLKFPTEEGVGAVCGEQRMSRE
        M LG + LK S  PLVGFGG++V P G +E PVTFG G ++VT+MV+ LVV+    YNAILGRPT+H ++A+ STYHQ +KFPT  GVG + GEQR+SRE
Subjt:  MKLGSEHLKPSLTPLVGFGGDKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCVPVYNAILGRPTLHGIKAVASTYHQVLKFPTEEGVGAVCGEQRMSRE

Query:  CYFMALRNIDR
        CY+ ++R+ DR
Subjt:  CYFMALRNIDR

A0A6J1CZ14 uncharacterized protein LOC1110159013.5e-3056.76Show/hide
Query:  MKLGSEHLKPSLTPLVGFGGDKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCVPVYNAILGRPTLHGIKAVASTYHQVLKFPTEEGVGAVCGEQRMSRE
        M LG E LK SLTPL+GFGG+++ P+G +ELP+TF    +++TRMV+FLVVD    YN IL RPT+H ++A+ STYHQ +KFPT  GVG + GEQR+SRE
Subjt:  MKLGSEHLKPSLTPLVGFGGDKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCVPVYNAILGRPTLHGIKAVASTYHQVLKFPTEEGVGAVCGEQRMSRE

Query:  CYFMALRNIDR
        CY+ ++R  D+
Subjt:  CYFMALRNIDR

A0A6J1DAK4 uncharacterized protein LOC1110189026.5e-2956.76Show/hide
Query:  MKLGSEHLKPSLTPLVGFGGDKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCVPVYNAILGRPTLHGIKAVASTYHQVLKFPTEEGVGAVCGEQRMSRE
        M LG   LK S  PLVGFGG+ V P G +ELPVTFG G +++T+MV+FLVVD     NAILGRPT+H +KA+ S YHQ +KFPT  G+G + GEQR+SRE
Subjt:  MKLGSEHLKPSLTPLVGFGGDKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCVPVYNAILGRPTLHGIKAVASTYHQVLKFPTEEGVGAVCGEQRMSRE

Query:  CYFMALRNIDR
        CY+ +++  D+
Subjt:  CYFMALRNIDR

A0A6J1DQY2 uncharacterized protein LOC1110223211.0e-2960.36Show/hide
Query:  MKLGSEHLKPSLTPLVGFGGDKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCVPVYNAILGRPTLHGIKAVASTYHQVLKFPTEEGVGAVCGEQRMSRE
        M LG + LK S  PLVGFGG++V   G +ELPVTFG G ++VT+MV+FLVV+    YNAILGRPT+H +KA+ STYHQ  KFPT  GVG + GEQR+SRE
Subjt:  MKLGSEHLKPSLTPLVGFGGDKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCVPVYNAILGRPTLHGIKAVASTYHQVLKFPTEEGVGAVCGEQRMSRE

Query:  CYFMALRNIDR
        CY  ++R+ DR
Subjt:  CYFMALRNIDR

A0A6J1DXV4 uncharacterized protein LOC1110251476.5e-2957.66Show/hide
Query:  MKLGSEHLKPSLTPLVGFGGDKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCVPVYNAILGRPTLHGIKAVASTYHQVLKFPTEEGVGAVCGEQRMSRE
        M LG + LK S  PL+GFG ++V P G +EL VTFG G ++VT+M++FLVVD    YNAILGR T+H +KA+ STYHQ +KFPT  GVG + GEQR+SRE
Subjt:  MKLGSEHLKPSLTPLVGFGGDKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCVPVYNAILGRPTLHGIKAVASTYHQVLKFPTEEGVGAVCGEQRMSRE

Query:  CYFMALRNIDR
        CY+ ++R  DR
Subjt:  CYFMALRNIDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACTAGGGAGTGAACACCTGAAACCGAGCCTTACGCCGCTAGTGGGTTTTGGCGGAGATAAGGTAAGCCCAAGAGGGAGCGTCGAATTACCGGTGACGTTTGGAGA
AGGATTGCAGACAGTAACGAGGATGGTCAATTTCTTGGTGGTTGATTGCGTCCCGGTGTATAATGCCATCTTGGGACGACCCACTCTACACGGGATCAAGGCTGTGGCTT
CAACCTACCACCAAGTCCTGAAGTTCCCAACGGAAGAAGGTGTAGGAGCAGTGTGCGGCGAGCAGAGAATGTCAAGGGAATGCTACTTCATGGCACTCAGGAACATTGAC
AGAAAGATTCAGGCGACACCAGCCTCGGGATATGGCCGAGGCCGAGCAATCGAAGGAGCAAGTTTCCCCTCCCAATGGAGTATTAGTTTATTATTTACTGTGTTTTCAGT
CCTCCAGGACCATCTTCAGCTTTCTTTATTCTTTGTAATCAATTTGTTGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACTAGGGAGTGAACACCTGAAACCGAGCCTTACGCCGCTAGTGGGTTTTGGCGGAGATAAGGTAAGCCCAAGAGGGAGCGTCGAATTACCGGTGACGTTTGGAGA
AGGATTGCAGACAGTAACGAGGATGGTCAATTTCTTGGTGGTTGATTGCGTCCCGGTGTATAATGCCATCTTGGGACGACCCACTCTACACGGGATCAAGGCTGTGGCTT
CAACCTACCACCAAGTCCTGAAGTTCCCAACGGAAGAAGGTGTAGGAGCAGTGTGCGGCGAGCAGAGAATGTCAAGGGAATGCTACTTCATGGCACTCAGGAACATTGAC
AGAAAGATTCAGGCGACACCAGCCTCGGGATATGGCCGAGGCCGAGCAATCGAAGGAGCAAGTTTCCCCTCCCAATGGAGTATTAGTTTATTATTTACTGTGTTTTCAGT
CCTCCAGGACCATCTTCAGCTTTCTTTATTCTTTGTAATCAATTTGTTGGTTTGA
Protein sequenceShow/hide protein sequence
MKLGSEHLKPSLTPLVGFGGDKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCVPVYNAILGRPTLHGIKAVASTYHQVLKFPTEEGVGAVCGEQRMSRECYFMALRNID
RKIQATPASGYGRGRAIEGASFPSQWSISLLFTVFSVLQDHLQLSLFFVINLLV