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Lag0025381 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025381
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr10:12068305..12070952
RNA-Seq ExpressionLag0025381
SyntenyLag0025381
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3618422.1 hypothetical protein FXO38_33432 [Capsicum annuum]1.9e-1965.43Show/hide
Query:  MESEFIALDKVGEEAEWLCNFLEDIRNWTKPVPPICIHSDSQTAIGRAQNLMYN------DNIADPLTKVLAREQVNTTRK
        MESEFIALDK GEE EWL NFLEDI  W KPV P+CIH DSQ AIGRA+++MYN      DN++D LTK L+RE V  T K
Subjt:  MESEFIALDKVGEEAEWLCNFLEDIRNWTKPVPPICIHSDSQTAIGRAQNLMYN------DNIADPLTKVLAREQVNTTRK

PHT86858.1 hypothetical protein T459_08964 [Capsicum annuum]1.9e-1964.2Show/hide
Query:  MESEFIALDKVGEEAEWLCNFLEDIRNWTKPVPPICIHSDSQTAIGRAQNLMYN------DNIADPLTKVLAREQVNTTRK
        MESEFI L+K GEEAEWL NFLEDI  W KPV P+CIH DSQ  IGRA ++MYN      DN++DPLTK L+RE V  T K
Subjt:  MESEFIALDKVGEEAEWLCNFLEDIRNWTKPVPPICIHSDSQTAIGRAQNLMYN------DNIADPLTKVLAREQVNTTRK

PHU03907.1 hypothetical protein BC332_29158 [Capsicum chinense]4.9e-2065.12Show/hide
Query:  MESEFIALDKVGEEAEWLCNFLEDIRNWTKPVPPICIHSDSQTAIGRAQNLMYN-------DNIADPLTKVLAREQVNTTRKTVLL
        MESEFI LDK GEEAEWL NFLEDI  W KPV PICIH DSQ AIGRA N+MYN       DN +DP+TK L+RE V  T K + L
Subjt:  MESEFIALDKVGEEAEWLCNFLEDIRNWTKPVPPICIHSDSQTAIGRAQNLMYN-------DNIADPLTKVLAREQVNTTRKTVLL

PHU05739.1 hypothetical protein BC332_26561 [Capsicum chinense]6.4e-2066.67Show/hide
Query:  MESEFIALDKVGEEAEWLCNFLEDIRNWTKPVPPICIHSDSQTAIGRAQNLMYN------DNIADPLTKVLAREQVNTTRK
        MESEFIALDKVGEEAEWL NFLEDI  W KPV P+CIH DSQ AIG+A ++M N      DN++DPLTK L+RE V  T K
Subjt:  MESEFIALDKVGEEAEWLCNFLEDIRNWTKPVPPICIHSDSQTAIGRAQNLMYN------DNIADPLTKVLAREQVNTTRK

RVW87556.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]1.4e-1955.24Show/hide
Query:  MESEFIALDKVGEEAEWLCNFLEDIRNWTKPVPPICIHSDSQTAIGRAQNLMYN------------------------------DNIADPLTKVLAREQV
        MESEFIA+DK GEEAEWL NFLEDI NW+KPVP ICIH DSQ+AIGRAQ+  YN                              DNIADPLTK L REQV
Subjt:  MESEFIALDKVGEEAEWLCNFLEDIRNWTKPVPPICIHSDSQTAIGRAQNLMYN------------------------------DNIADPLTKVLAREQV

Query:  NTTRK
         ++ K
Subjt:  NTTRK

TrEMBL top hitse value%identityAlignment
A0A2G2ZY21 Uncharacterized protein9.0e-2064.2Show/hide
Query:  MESEFIALDKVGEEAEWLCNFLEDIRNWTKPVPPICIHSDSQTAIGRAQNLMYN------DNIADPLTKVLAREQVNTTRK
        MESEFI L+K GEEAEWL NFLEDI  W KPV P+CIH DSQ  IGRA ++MYN      DN++DPLTK L+RE V  T K
Subjt:  MESEFIALDKVGEEAEWLCNFLEDIRNWTKPVPPICIHSDSQTAIGRAQNLMYN------DNIADPLTKVLAREQVNTTRK

A0A2G3BBQ2 Uncharacterized protein2.4e-2065.12Show/hide
Query:  MESEFIALDKVGEEAEWLCNFLEDIRNWTKPVPPICIHSDSQTAIGRAQNLMYN-------DNIADPLTKVLAREQVNTTRKTVLL
        MESEFI LDK GEEAEWL NFLEDI  W KPV PICIH DSQ AIGRA N+MYN       DN +DP+TK L+RE V  T K + L
Subjt:  MESEFIALDKVGEEAEWLCNFLEDIRNWTKPVPPICIHSDSQTAIGRAQNLMYN-------DNIADPLTKVLAREQVNTTRKTVLL

A0A2G3BGZ0 Uncharacterized protein3.1e-2066.67Show/hide
Query:  MESEFIALDKVGEEAEWLCNFLEDIRNWTKPVPPICIHSDSQTAIGRAQNLMYN------DNIADPLTKVLAREQVNTTRK
        MESEFIALDKVGEEAEWL NFLEDI  W KPV P+CIH DSQ AIG+A ++M N      DN++DPLTK L+RE V  T K
Subjt:  MESEFIALDKVGEEAEWLCNFLEDIRNWTKPVPPICIHSDSQTAIGRAQNLMYN------DNIADPLTKVLAREQVNTTRK

A0A2N9ISW3 Uncharacterized protein5.3e-2055.24Show/hide
Query:  MESEFIALDKVGEEAEWLCNFLEDIRNWTKPVPPICIHSDSQTAIGRAQNLMYN------------------------------DNIADPLTKVLAREQV
        MESEFIALDK GEEAEWL +FLED+  WTKPVPPICIH DSQ+AIGRAQ+ MYN                              DNIADPLTK L+ E+V
Subjt:  MESEFIALDKVGEEAEWLCNFLEDIRNWTKPVPPICIHSDSQTAIGRAQNLMYN------------------------------DNIADPLTKVLAREQV

Query:  NTTRK
        N + K
Subjt:  NTTRK

A0A438HSX0 Retrovirus-related Pol polyprotein from transposon TNT 1-946.9e-2055.24Show/hide
Query:  MESEFIALDKVGEEAEWLCNFLEDIRNWTKPVPPICIHSDSQTAIGRAQNLMYN------------------------------DNIADPLTKVLAREQV
        MESEFIA+DK GEEAEWL NFLEDI NW+KPVP ICIH DSQ+AIGRAQ+  YN                              DNIADPLTK L REQV
Subjt:  MESEFIALDKVGEEAEWLCNFLEDIRNWTKPVPPICIHSDSQTAIGRAQNLMYN------------------------------DNIADPLTKVLAREQV

Query:  NTTRK
         ++ K
Subjt:  NTTRK

SwissProt top hitse value%identityAlignment
B5X0N6 K(+) efflux antiporter 62.3e-0447.62Show/hide
Query:  VNTTRKTVLLDVFGMSNFNTLDAFESVERITVKNKVGVMLAQIGKFAFVLLSRASNLHLIRAK
        + TT  T ++  FG +N   L              VG+ LAQIG+FAFVLLSRASNLHLI  K
Subjt:  VNTTRKTVLLDVFGMSNFNTLDAFESVERITVKNKVGVMLAQIGKFAFVLLSRASNLHLIRAK

Q8VYR9 K(+) efflux antiporter 53.0e-0482.14Show/hide
Query:  VGVMLAQIGKFAFVLLSRASNLHLIRAK
        VGV+LAQIG+FAFVLLSRASNLH+I  K
Subjt:  VGVMLAQIGKFAFVLLSRASNLHLIRAK

Q9ZUN3 K(+) efflux antiporter 43.9e-0443.06Show/hide
Query:  LTKVLAREQVNTTRKTVLLDVFGMSNFNTLDAFESVERITVKNKVGVMLAQIGKFAFVLLSRASNLHLIRAK
        L  VL    + T    +++ VFG +N   +              VG+ LAQIG+FAFVLLSRASNLHLI +K
Subjt:  LTKVLAREQVNTTRKTVLLDVFGMSNFNTLDAFESVERITVKNKVGVMLAQIGKFAFVLLSRASNLHLIRAK

Arabidopsis top hitse value%identityAlignment
AT2G19600.1 K+ efflux antiporter 42.8e-0543.06Show/hide
Query:  LTKVLAREQVNTTRKTVLLDVFGMSNFNTLDAFESVERITVKNKVGVMLAQIGKFAFVLLSRASNLHLIRAK
        L  VL    + T    +++ VFG +N   +              VG+ LAQIG+FAFVLLSRASNLHLI +K
Subjt:  LTKVLAREQVNTTRKTVLLDVFGMSNFNTLDAFESVERITVKNKVGVMLAQIGKFAFVLLSRASNLHLIRAK

AT5G11800.1 K+ efflux antiporter 61.6e-0547.62Show/hide
Query:  VNTTRKTVLLDVFGMSNFNTLDAFESVERITVKNKVGVMLAQIGKFAFVLLSRASNLHLIRAK
        + TT  T ++  FG +N   L              VG+ LAQIG+FAFVLLSRASNLHLI  K
Subjt:  VNTTRKTVLLDVFGMSNFNTLDAFESVERITVKNKVGVMLAQIGKFAFVLLSRASNLHLIRAK

AT5G51710.1 K+ efflux antiporter 52.1e-0582.14Show/hide
Query:  VGVMLAQIGKFAFVLLSRASNLHLIRAK
        VGV+LAQIG+FAFVLLSRASNLH+I  K
Subjt:  VGVMLAQIGKFAFVLLSRASNLHLIRAK

AT5G51710.2 K+ efflux antiporter 52.1e-0582.14Show/hide
Query:  VGVMLAQIGKFAFVLLSRASNLHLIRAK
        VGV+LAQIG+FAFVLLSRASNLH+I  K
Subjt:  VGVMLAQIGKFAFVLLSRASNLHLIRAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCCGAATTCATAGCTTTGGACAAAGTAGGGGAAGAAGCCGAATGGCTATGTAACTTTTTGGAAGATATTCGTAATTGGACTAAACCTGTACCCCCAATATGTAT
ACATTCTGATAGTCAAACTGCTATTGGAAGAGCGCAAAACTTGATGTATAATGATAATATTGCGGATCCGCTTACGAAAGTTTTGGCAAGAGAGCAAGTGAACACTACAA
GAAAAACTGTATTACTTGACGTTTTTGGAATGTCAAATTTTAATACTCTTGACGCTTTTGAAAGTGTTGAGAGAATCACTGTCAAGAATAAGGTTGGGGTCATGCTTGCT
CAAATTGGAAAATTTGCTTTTGTTCTCCTAAGTCGTGCTTCAAATCTTCATCTCATTAGGGCCAAAACCAAAGCAAAGGAGAAGCTCCTTGCCAAGGAAGCTGCTCAAAG
GGTGCCAAGTGATTGTTTTGAGTTTAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATCCGAATTCATAGCTTTGGACAAAGTAGGGGAAGAAGCCGAATGGCTATGTAACTTTTTGGAAGATATTCGTAATTGGACTAAACCTGTACCCCCAATATGTAT
ACATTCTGATAGTCAAACTGCTATTGGAAGAGCGCAAAACTTGATGTATAATGATAATATTGCGGATCCGCTTACGAAAGTTTTGGCAAGAGAGCAAGTGAACACTACAA
GAAAAACTGTATTACTTGACGTTTTTGGAATGTCAAATTTTAATACTCTTGACGCTTTTGAAAGTGTTGAGAGAATCACTGTCAAGAATAAGGTTGGGGTCATGCTTGCT
CAAATTGGAAAATTTGCTTTTGTTCTCCTAAGTCGTGCTTCAAATCTTCATCTCATTAGGGCCAAAACCAAAGCAAAGGAGAAGCTCCTTGCCAAGGAAGCTGCTCAAAG
GGTGCCAAGTGATTGTTTTGAGTTTAGATGA
Protein sequenceShow/hide protein sequence
MESEFIALDKVGEEAEWLCNFLEDIRNWTKPVPPICIHSDSQTAIGRAQNLMYNDNIADPLTKVLAREQVNTTRKTVLLDVFGMSNFNTLDAFESVERITVKNKVGVMLA
QIGKFAFVLLSRASNLHLIRAKTKAKEKLLAKEAAQRVPSDCFEFR