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Lag0025397 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025397
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr10:12477168..12477563
RNA-Seq ExpressionLag0025397
SyntenyLag0025397
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER41007.1 pentatricopeptide repeat-containing protein [Striga asiatica]9.5e-0956.72Show/hide
Query:  ERQKESENLACSHCDLLRAVPPLEQRLRIASASLGQAVATRHSARDRFRCRQPDCRAGPSGSRLWHS
        +R  E  + AC H    RAVPPLEQR+R AS S GQA ATRHSARDR R R    R  P+G R W S
Subjt:  ERQKESENLACSHCDLLRAVPPLEQRLRIASASLGQAVATRHSARDRFRCRQPDCRAGPSGSRLWHS
TrEMBL top hitse value%identityAlignment
A0A5A7Q9B3 Pentatricopeptide repeat-containing protein4.6e-0956.72Show/hide
Query:  ERQKESENLACSHCDLLRAVPPLEQRLRIASASLGQAVATRHSARDRFRCRQPDCRAGPSGSRLWHS
        +R  E  + AC H    RAVPPLEQR+R AS S GQA ATRHSARDR R R    R  P+G R W S
Subjt:  ERQKESENLACSHCDLLRAVPPLEQRLRIASASLGQAVATRHSARDRFRCRQPDCRAGPSGSRLWHS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGATTTCCAGGGATCTAGGGTTTTATAATTGGAGAGAAGAGAGACAGAAAGAGAGCGAAAACTTAGCTTGCTCGCACTGCGATCTCTTGAGAGCTGTTCCGCCGCT
GGAGCAGAGGCTTCGCATCGCCTCCGCCTCGTTAGGGCAAGCCGTCGCCACCAGGCACTCTGCAAGAGATCGATTCAGGTGCCGGCAGCCCGACTGTCGCGCCGGACCTT
CTGGAAGTCGCTTGTGGCACTCTCGGAGAGCCTGCTCTAACCGCTCGCAGCCGCCGTCGCCGCCGAACGGAGCTTCGCCGGTAGGGAACATATCTTTCTTTCCCCTCTGG
CTATCGGGTCCCACACCATTTGGGAGGGAAGAGAAAAAGCTTTCTGCAAAATTAGTTAGGGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGATTTCCAGGGATCTAGGGTTTTATAATTGGAGAGAAGAGAGACAGAAAGAGAGCGAAAACTTAGCTTGCTCGCACTGCGATCTCTTGAGAGCTGTTCCGCCGCT
GGAGCAGAGGCTTCGCATCGCCTCCGCCTCGTTAGGGCAAGCCGTCGCCACCAGGCACTCTGCAAGAGATCGATTCAGGTGCCGGCAGCCCGACTGTCGCGCCGGACCTT
CTGGAAGTCGCTTGTGGCACTCTCGGAGAGCCTGCTCTAACCGCTCGCAGCCGCCGTCGCCGCCGAACGGAGCTTCGCCGGTAGGGAACATATCTTTCTTTCCCCTCTGG
CTATCGGGTCCCACACCATTTGGGAGGGAAGAGAAAAAGCTTTCTGCAAAATTAGTTAGGGTATAA
Protein sequenceShow/hide protein sequence
MPISRDLGFYNWREERQKESENLACSHCDLLRAVPPLEQRLRIASASLGQAVATRHSARDRFRCRQPDCRAGPSGSRLWHSRRACSNRSQPPSPPNGASPVGNISFFPLW
LSGPTPFGREEKKLSAKLVRV