; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025462 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025462
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr10:13382713..13385633
RNA-Seq ExpressionLag0025462
SyntenyLag0025462
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]3.0e-3546.73Show/hide
Query:  QQIEALIREGYLKKFVGNDRSKRPLPADQGKGGANPPLEIRTILGGPSGGESGRKRKAAIREAQ--QEPGEQVTLMIANAKVHQILVDGGSSVDMLSTTV
        +++E LIR GYLK++V     + P     G+   +P  EIRTI+GGP   ESGRKRKA +REA+  +E  E     IAN KVH++LVDGGS  D+LS T 
Subjt:  QQIEALIREGYLKKFVGNDRSKRPLPADQGKGGANPPLEIRTILGGPSGGESGRKRKAAIREAQ--QEPGEQVTLMIANAKVHQILVDGGSSVDMLSTTV

Query:  FDAMKLGSDCLRPNLTLLVGL-AEKSKPKRKRRTVGDVWGRPQTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEGGVGAVYDEQK
        + AM LG   L+ +   LVG   E+  P+ +          P++VT+M++ LVV+   +YNAILGRPT+H L+A+ STYHQ +KFPT GGVG +  EQ+
Subjt:  FDAMKLGSDCLRPNLTLLVGL-AEKSKPKRKRRTVGDVWGRPQTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEGGVGAVYDEQK

XP_022155902.1 uncharacterized protein LOC111022905 [Momordica charantia]7.6e-3140.61Show/hide
Query:  QQIEALIREGYLKKFVGNDRSKRPLPADQGKGGANPPLEIRTILGGPSGGESGRKRKAAIREAQQEPGEQ------------------------------
        +++E LIR GYLK++V     + P     G+   +P  EI+TI+GGP   ESGRK K  +REA+   G                                
Subjt:  QQIEALIREGYLKKFVGNDRSKRPLPADQGKGGANPPLEIRTILGGPSGGESGRKRKAAIREAQQEPGEQ------------------------------

Query:  ---VTLMIANAKVHQILVDGGSSVDMLSTTVFDAMKLGSDCLRPNLTLLVGLAEKSKPKRKRRTVGDVWGRPQTVTRMINFLVVDCVPAYNAILGRPTLH
           +TL IAN KVH+ILVDGG+S D++S T +  M +G   L+ N T LV L  + +      T G     P++VT+M+ FLVVD   +YNAILGR T+H
Subjt:  ---VTLMIANAKVHQILVDGGSSVDMLSTTVFDAMKLGSDCLRPNLTLLVGLAEKSKPKRKRRTVGDVWGRPQTVTRMINFLVVDCVPAYNAILGRPTLH

Query:  GLKAVASTYHQVLKFPTEGGVGAVYDEQK
         LKA+ STYHQ +KFPT GGVG +  EQ+
Subjt:  GLKAVASTYHQVLKFPTEGGVGAVYDEQK

XP_022158093.1 uncharacterized protein LOC111024662 [Momordica charantia]6.2e-3339.57Show/hide
Query:  QQIEALIREGYLKKFVGNDRSKRPLPADQGKGGANPPLEIRTILGGPSGGESGRKRKAAIREAQQEPGE-------------------------------
        +++E LIR GYLK++V + ++      D      +P  EI+TI GGP+  E G+KRKA+++EA+  PG                                
Subjt:  QQIEALIREGYLKKFVGNDRSKRPLPADQGKGGANPPLEIRTILGGPSGGESGRKRKAAIREAQQEPGE-------------------------------

Query:  --QVTLMIANAKVHQILVDGGSSVDMLSTTVFDAMKLGSDCLRPNLTLLVGLAEKSKPKRKRRTVGDVWGR-PQTVTRMINFLVVDCVPAYNAILGRPTL
           +TL I N KVH+ILVDGGSS  ++S T + AM LG   L+ NL  LVG   +   ++ R  +   +G  P+ +T+++ FLVVD   +YNAILGRPT+
Subjt:  --QVTLMIANAKVHQILVDGGSSVDMLSTTVFDAMKLGSDCLRPNLTLLVGLAEKSKPKRKRRTVGDVWGR-PQTVTRMINFLVVDCVPAYNAILGRPTL

Query:  HGLKAVASTYHQVLKFPTEGGVGAVYDEQK
        H LKA+ STYH+ LKFPT+GG+  V  EQ+
Subjt:  HGLKAVASTYHQVLKFPTEGGVGAVYDEQK

XP_023897071.1 uncharacterized protein LOC112008938 [Quercus suber]9.9e-3141.92Show/hide
Query:  QQIEALIREGYLKKFVGNDRSKRPLPADQGKGGANPPL-EIRTILGGPSGGESGRKRKAAIREAQ----------------------QEPGEQ-------
        QQIE LIR+G LK F+G DR    L A + +    PPL EIR ILGG S G+S + +KA ++  Q                       E  E+       
Subjt:  QQIEALIREGYLKKFVGNDRSKRPLPADQGKGGANPPL-EIRTILGGPSGGESGRKRKAAIREAQ----------------------QEPGEQ-------

Query:  ---VTLMIANAKVHQILVDGGSSVDMLSTTVFDAMKLGSDCLRPNLTLLVGL-AEKSKPKRKRRTVGDVWGRPQTVTRMINFLVVDCVPAYNAILGRPTL
           VTL+IA+ K  ++L+D GSS D+L  + F  M+LG D LRP  + LVG    K +P         V   PQ VT+ +NFLVVDC  +YNAI+GRPTL
Subjt:  ---VTLMIANAKVHQILVDGGSSVDMLSTTVFDAMKLGSDCLRPNLTLLVGL-AEKSKPKRKRRTVGDVWGRPQTVTRMINFLVVDCVPAYNAILGRPTL

Query:  HGLKAVASTYHQVLKFPTEGGVGAVYDEQ
        +  KA+ STYH  +KFPTE G G V+ +Q
Subjt:  HGLKAVASTYHQVLKFPTEGGVGAVYDEQ

XP_023903529.1 uncharacterized protein LOC112015361 [Quercus suber]9.9e-3141.92Show/hide
Query:  QQIEALIREGYLKKFVGNDRSKRPLPADQGKGGANPPL-EIRTILGGPSGGESGRKRKAAIREAQ----------------------QEPGEQ-------
        QQIE LIR+G LK F+G DR    L A + +    PPL EIR ILGG S G+S + +KA ++  Q                       E  E+       
Subjt:  QQIEALIREGYLKKFVGNDRSKRPLPADQGKGGANPPL-EIRTILGGPSGGESGRKRKAAIREAQ----------------------QEPGEQ-------

Query:  ---VTLMIANAKVHQILVDGGSSVDMLSTTVFDAMKLGSDCLRPNLTLLVGL-AEKSKPKRKRRTVGDVWGRPQTVTRMINFLVVDCVPAYNAILGRPTL
           VTL+IA+ K  ++L+D GSS D+L  + F  M+LG D LRP  + LVG    K +P         V   PQ VT+ +NFLVVDC  +YNAI+GRPTL
Subjt:  ---VTLMIANAKVHQILVDGGSSVDMLSTTVFDAMKLGSDCLRPNLTLLVGL-AEKSKPKRKRRTVGDVWGRPQTVTRMINFLVVDCVPAYNAILGRPTL

Query:  HGLKAVASTYHQVLKFPTEGGVGAVYDEQ
        +  KA+ STYH  +KFPTE G G V+ +Q
Subjt:  HGLKAVASTYHQVLKFPTEGGVGAVYDEQ

TrEMBL top hitse value%identityAlignment
A0A2N9IZQ4 Uncharacterized protein1.0e-2841.1Show/hide
Query:  LSTP--RPMAEADQRPRSRRPCRTKSQIQQIEALIREGYLKKFVGNDRSKRPL--PADQGKGGAN---PPLEIRTILGGP-SGGESGRKRKAAIRE---A
        L+TP  + + +    P  R P    +  +Q+E LIR+G L+K+V    + RP   PA + +   N   P  EIRTI+GGP SGG S   RKA  R+    
Subjt:  LSTP--RPMAEADQRPRSRRPCRTKSQIQQIEALIREGYLKKFVGNDRSKRPL--PADQGKGGAN---PPLEIRTILGGP-SGGESGRKRKAAIRE---A

Query:  QQEPGEQ---VTLMIANAKVHQILVDGGSSVDMLSTTVFDAMKLGSDCLRPNLTLLVGL-AEKSKPKRKRRTVGDVWGRPQTVTRMINFLVVDCVPAYNA
          +P +    +T+ IA     +++VD GSS D+L   V+  M+L  D LRP  T LVG   +K  P         V   P+TV++ ++FLVV+C  AYNA
Subjt:  QQEPGEQ---VTLMIANAKVHQILVDGGSSVDMLSTTVFDAMKLGSDCLRPNLTLLVGL-AEKSKPKRKRRTVGDVWGRPQTVTRMINFLVVDCVPAYNA

Query:  ILGRPTLHGLKAVASTYHQVLKFPTEGGVGAVYDEQ
        I+GRPTL+ L+AV STYH +LKFPTE G+G V  +Q
Subjt:  ILGRPTLHGLKAVASTYHQVLKFPTEGGVGAVYDEQ

A0A6J1CTS4 uncharacterized protein LOC1110141471.4e-3546.73Show/hide
Query:  QQIEALIREGYLKKFVGNDRSKRPLPADQGKGGANPPLEIRTILGGPSGGESGRKRKAAIREAQ--QEPGEQVTLMIANAKVHQILVDGGSSVDMLSTTV
        +++E LIR GYLK++V     + P     G+   +P  EIRTI+GGP   ESGRKRKA +REA+  +E  E     IAN KVH++LVDGGS  D+LS T 
Subjt:  QQIEALIREGYLKKFVGNDRSKRPLPADQGKGGANPPLEIRTILGGPSGGESGRKRKAAIREAQ--QEPGEQVTLMIANAKVHQILVDGGSSVDMLSTTV

Query:  FDAMKLGSDCLRPNLTLLVGL-AEKSKPKRKRRTVGDVWGRPQTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEGGVGAVYDEQK
        + AM LG   L+ +   LVG   E+  P+ +          P++VT+M++ LVV+   +YNAILGRPT+H L+A+ STYHQ +KFPT GGVG +  EQ+
Subjt:  FDAMKLGSDCLRPNLTLLVGL-AEKSKPKRKRRTVGDVWGRPQTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEGGVGAVYDEQK

A0A6J1D8C9 uncharacterized protein LOC1110183008.2e-3138.26Show/hide
Query:  QQIEALIREGYLKKFVGNDRSKRPLPADQGKGGANPPLEIRTILGGPSGGESGRKRKAAIREAQ--------------QEPGE-----------------
        ++++ LI+ GYLK++V + ++ +    D      +P  EIRTI+GGP   E GRKRKA+IRE +              ++P +                 
Subjt:  QQIEALIREGYLKKFVGNDRSKRPLPADQGKGGANPPLEIRTILGGPSGGESGRKRKAAIREAQ--------------QEPGE-----------------

Query:  --QVTLMIANAKVHQILVDGGSSVDMLSTTVFDAMKLGSDCLRPNLTLLVGL-AEKSKPKRKRRTVGDVWGRPQTVTRMINFLVVDCVPAYNAILGRPTL
           +TL IANAKVH+ILVDGGSS D++S T + AM LG    + +   LV    E+  P+ +          P+++T +++FLV+D   +YNAILGRPT+
Subjt:  --QVTLMIANAKVHQILVDGGSSVDMLSTTVFDAMKLGSDCLRPNLTLLVGL-AEKSKPKRKRRTVGDVWGRPQTVTRMINFLVVDCVPAYNAILGRPTL

Query:  HGLKAVASTYHQVLKFPTEGGVGAVYDEQK
        H LKA+ STYHQ + FPT GG+G + +EQ+
Subjt:  HGLKAVASTYHQVLKFPTEGGVGAVYDEQK

A0A6J1DQL9 uncharacterized protein LOC1110229053.7e-3140.61Show/hide
Query:  QQIEALIREGYLKKFVGNDRSKRPLPADQGKGGANPPLEIRTILGGPSGGESGRKRKAAIREAQQEPGEQ------------------------------
        +++E LIR GYLK++V     + P     G+   +P  EI+TI+GGP   ESGRK K  +REA+   G                                
Subjt:  QQIEALIREGYLKKFVGNDRSKRPLPADQGKGGANPPLEIRTILGGPSGGESGRKRKAAIREAQQEPGEQ------------------------------

Query:  ---VTLMIANAKVHQILVDGGSSVDMLSTTVFDAMKLGSDCLRPNLTLLVGLAEKSKPKRKRRTVGDVWGRPQTVTRMINFLVVDCVPAYNAILGRPTLH
           +TL IAN KVH+ILVDGG+S D++S T +  M +G   L+ N T LV L  + +      T G     P++VT+M+ FLVVD   +YNAILGR T+H
Subjt:  ---VTLMIANAKVHQILVDGGSSVDMLSTTVFDAMKLGSDCLRPNLTLLVGLAEKSKPKRKRRTVGDVWGRPQTVTRMINFLVVDCVPAYNAILGRPTLH

Query:  GLKAVASTYHQVLKFPTEGGVGAVYDEQK
         LKA+ STYHQ +KFPT GGVG +  EQ+
Subjt:  GLKAVASTYHQVLKFPTEGGVGAVYDEQK

A0A6J1DV51 uncharacterized protein LOC1110246623.0e-3339.57Show/hide
Query:  QQIEALIREGYLKKFVGNDRSKRPLPADQGKGGANPPLEIRTILGGPSGGESGRKRKAAIREAQQEPGE-------------------------------
        +++E LIR GYLK++V + ++      D      +P  EI+TI GGP+  E G+KRKA+++EA+  PG                                
Subjt:  QQIEALIREGYLKKFVGNDRSKRPLPADQGKGGANPPLEIRTILGGPSGGESGRKRKAAIREAQQEPGE-------------------------------

Query:  --QVTLMIANAKVHQILVDGGSSVDMLSTTVFDAMKLGSDCLRPNLTLLVGLAEKSKPKRKRRTVGDVWGR-PQTVTRMINFLVVDCVPAYNAILGRPTL
           +TL I N KVH+ILVDGGSS  ++S T + AM LG   L+ NL  LVG   +   ++ R  +   +G  P+ +T+++ FLVVD   +YNAILGRPT+
Subjt:  --QVTLMIANAKVHQILVDGGSSVDMLSTTVFDAMKLGSDCLRPNLTLLVGLAEKSKPKRKRRTVGDVWGR-PQTVTRMINFLVVDCVPAYNAILGRPTL

Query:  HGLKAVASTYHQVLKFPTEGGVGAVYDEQK
        H LKA+ STYH+ LKFPT+GG+  V  EQ+
Subjt:  HGLKAVASTYHQVLKFPTEGGVGAVYDEQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTGTTATGGGTAATTTCGGACCACACTGACAAACAAGGAGCTGGCAAGGACAATCGGGCAAAGGTAGGACCAGAAGTCCGACCCATAGGAAGACCGGACCAAAG
GGCCGGGCCAACATGGCCCGACCCATATGGTCGGCCTCGGCAAAAGGCCGAGGCCGACCATTCGGCCCGCTTGCGCAGGTCGAACTCGGTCACCTCTTTTCGACTCGTGA
TGCCCGGATCCCCCGGTTCCGCTTGGTTCATCCCGAAACACCTCCGAATTCTTAAAGACCCAAGGAGGACGAGGTCGGCCTCAACCCATCACCGAGGCCGACCCGGGCCA
AAGGCCCAGAGATCATTTGAGGTCACGTCCTTCCCGTTATCCTATAAATTCACCGTTGATCGTCACGTGGAGCGAGGGCAAATTCCTAAGCGAAATTTGACCATCAACAG
TTGGTGCCGTCGGTGGGGAAGTTTCGTTGACAAGAAAATGCAGTGCACGACAAAAGCCCGAGTCTGTAAGGTGCGAGGAAGAGCGTTTACGCCGAGACCTCCAAAGGGTA
AAGAAATAGCAGATGAGGAGGTAGGGGATTTGGAGAGTGTAACTAGCCAAATGCCACCTCTCGGGGACAACCAGACCCAGAAGGAAGCTGAACCAAGCCGCAAAAGGACC
CGCATGAATTCTCCGTTAATTAAAGATAGCGTCAGATTTAGTAACGAAGTTTTGCAGGTGGAGGGTTACGACGACGGAGTTGCCTTGGCCGCTGTGATTTCAGGTCCAAA
TAGGAAGAAAGAGAGAGTCGGAGGGTGGCATCGAGAAGACAGAGGAAAAGGCACCGGGTCGAGGGAAGAGGCCGAAGCCGACTTGAGCACTCCTCGGCCAATGGCCGAGG
CCGACCAGAGGCCAAGGAGCCGCAGGCCGTGCAGAACCAAGAGCCAGATTCAACAGATAGAAGCCCTAATCCGAGAAGGTTACCTCAAGAAGTTCGTGGGGAATGACAGA
AGCAAGAGGCCACTGCCAGCAGATCAAGGTAAGGGCGGTGCCAACCCACCGCTCGAGATACGAACAATTTTAGGAGGACCATCTGGAGGAGAGTCAGGTAGAAAGCGAAA
GGCTGCAATTCGAGAGGCACAACAAGAGCCCGGAGAGCAAGTCACTCTAATGATTGCCAATGCAAAAGTTCACCAGATCCTCGTCGATGGGGGGAGTTCTGTTGATATGC
TCTCAACCACTGTGTTCGACGCCATGAAGCTGGGAAGCGATTGCCTGAGGCCGAACCTCACGCTGCTGGTGGGTTTGGCGGAAAAAAGTAAGCCCAAGAGGAAACGTCGA
ACTGTCGGTGACGTTTGGGGAAGACCGCAGACAGTAACAAGGATGATCAACTTTCTAGTGGTAGACTGCGTCCCAGCATATAATGCCATCTTGGGACGACCCACCCTACA
TGGACTTAAAGCTGTAGCCTCAACCTACCACCAAGTGCTGAAATTCCCAACCGAAGGAGGTGTAGGAGCAGTGTATGACGAGCAAAAATGTCAGGGTAATGTTACTTTAT
GGCGCTCAAGAACTCGACAGAAAAGTTCAGGCAACGACGATCTCAGGAGATGGCCGATGCCGAGCATCTATGGGATCAAACTATCCCCTTCCAATGGAGCATTAATGTCT
TTTGATTATGTTTACCAGTCCGTGGGACCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTGTTATGGGTAATTTCGGACCACACTGACAAACAAGGAGCTGGCAAGGACAATCGGGCAAAGGTAGGACCAGAAGTCCGACCCATAGGAAGACCGGACCAAAG
GGCCGGGCCAACATGGCCCGACCCATATGGTCGGCCTCGGCAAAAGGCCGAGGCCGACCATTCGGCCCGCTTGCGCAGGTCGAACTCGGTCACCTCTTTTCGACTCGTGA
TGCCCGGATCCCCCGGTTCCGCTTGGTTCATCCCGAAACACCTCCGAATTCTTAAAGACCCAAGGAGGACGAGGTCGGCCTCAACCCATCACCGAGGCCGACCCGGGCCA
AAGGCCCAGAGATCATTTGAGGTCACGTCCTTCCCGTTATCCTATAAATTCACCGTTGATCGTCACGTGGAGCGAGGGCAAATTCCTAAGCGAAATTTGACCATCAACAG
TTGGTGCCGTCGGTGGGGAAGTTTCGTTGACAAGAAAATGCAGTGCACGACAAAAGCCCGAGTCTGTAAGGTGCGAGGAAGAGCGTTTACGCCGAGACCTCCAAAGGGTA
AAGAAATAGCAGATGAGGAGGTAGGGGATTTGGAGAGTGTAACTAGCCAAATGCCACCTCTCGGGGACAACCAGACCCAGAAGGAAGCTGAACCAAGCCGCAAAAGGACC
CGCATGAATTCTCCGTTAATTAAAGATAGCGTCAGATTTAGTAACGAAGTTTTGCAGGTGGAGGGTTACGACGACGGAGTTGCCTTGGCCGCTGTGATTTCAGGTCCAAA
TAGGAAGAAAGAGAGAGTCGGAGGGTGGCATCGAGAAGACAGAGGAAAAGGCACCGGGTCGAGGGAAGAGGCCGAAGCCGACTTGAGCACTCCTCGGCCAATGGCCGAGG
CCGACCAGAGGCCAAGGAGCCGCAGGCCGTGCAGAACCAAGAGCCAGATTCAACAGATAGAAGCCCTAATCCGAGAAGGTTACCTCAAGAAGTTCGTGGGGAATGACAGA
AGCAAGAGGCCACTGCCAGCAGATCAAGGTAAGGGCGGTGCCAACCCACCGCTCGAGATACGAACAATTTTAGGAGGACCATCTGGAGGAGAGTCAGGTAGAAAGCGAAA
GGCTGCAATTCGAGAGGCACAACAAGAGCCCGGAGAGCAAGTCACTCTAATGATTGCCAATGCAAAAGTTCACCAGATCCTCGTCGATGGGGGGAGTTCTGTTGATATGC
TCTCAACCACTGTGTTCGACGCCATGAAGCTGGGAAGCGATTGCCTGAGGCCGAACCTCACGCTGCTGGTGGGTTTGGCGGAAAAAAGTAAGCCCAAGAGGAAACGTCGA
ACTGTCGGTGACGTTTGGGGAAGACCGCAGACAGTAACAAGGATGATCAACTTTCTAGTGGTAGACTGCGTCCCAGCATATAATGCCATCTTGGGACGACCCACCCTACA
TGGACTTAAAGCTGTAGCCTCAACCTACCACCAAGTGCTGAAATTCCCAACCGAAGGAGGTGTAGGAGCAGTGTATGACGAGCAAAAATGTCAGGGTAATGTTACTTTAT
GGCGCTCAAGAACTCGACAGAAAAGTTCAGGCAACGACGATCTCAGGAGATGGCCGATGCCGAGCATCTATGGGATCAAACTATCCCCTTCCAATGGAGCATTAATGTCT
TTTGATTATGTTTACCAGTCCGTGGGACCATGA
Protein sequenceShow/hide protein sequence
MKLLWVISDHTDKQGAGKDNRAKVGPEVRPIGRPDQRAGPTWPDPYGRPRQKAEADHSARLRRSNSVTSFRLVMPGSPGSAWFIPKHLRILKDPRRTRSASTHHRGRPGP
KAQRSFEVTSFPLSYKFTVDRHVERGQIPKRNLTINSWCRRWGSFVDKKMQCTTKARVCKVRGRAFTPRPPKGKEIADEEVGDLESVTSQMPPLGDNQTQKEAEPSRKRT
RMNSPLIKDSVRFSNEVLQVEGYDDGVALAAVISGPNRKKERVGGWHREDRGKGTGSREEAEADLSTPRPMAEADQRPRSRRPCRTKSQIQQIEALIREGYLKKFVGNDR
SKRPLPADQGKGGANPPLEIRTILGGPSGGESGRKRKAAIREAQQEPGEQVTLMIANAKVHQILVDGGSSVDMLSTTVFDAMKLGSDCLRPNLTLLVGLAEKSKPKRKRR
TVGDVWGRPQTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEGGVGAVYDEQKCQGNVTLWRSRTRQKSSGNDDLRRWPMPSIYGIKLSPSNGALMS
FDYVYQSVGP