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Lag0025500 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025500
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr10:13957424..13958466
RNA-Seq ExpressionLag0025500
SyntenyLag0025500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFS33374.1 hypothetical protein Acr_00g0028020 [Actinidia rufa]1.4e-0934.65Show/hide
Query:  LEDLTEQVDPPFTDEIMQAEVPHKFKLPTFSGKRSKKTTVQPTDHQTETRGKLNGYITCFSNEALQVEGYDDGMALP-RQWYNKLPRKSIGSFKELSRIF
        ++ L  Q DPPFT+ ++ A +  KFKLPT  G   +KT   P DH    +  +  ++   S+E +  + +   +  P R W+ KL   +I  F ELSR+F
Subjt:  LEDLTEQVDPPFTDEIMQAEVPHKFKLPTFSGKRSKKTTVQPTDHQTETRGKLNGYITCFSNEALQVEGYDDGMALP-RQWYNKLPRKSIGSFKELSRIF

Query:  ATQFLGARDRRKPQFNLLTIKQRLGES
           F+  R+R+K  F+L T+ Q+  ES
Subjt:  ATQFLGARDRRKPQFNLLTIKQRLGES

GFS44258.1 hypothetical protein Acr_00g0089400 [Actinidia rufa]3.1e-0934.88Show/hide
Query:  LEDLTEQVDPPFTDEIMQAEVPHKFKLPTFSGKRSKKTTVQPTDHQTETRG--KLNGYITCFSNEALQVEGYDDGMALP-RQWYNKLPRKSIGSFKELSR
        ++ L +Q++PPFT+ I++A +  KFKLPT  G    KT   P DH    +    L GY     ++ +  + +   +  P R W+ KL   +I SF +LSR
Subjt:  LEDLTEQVDPPFTDEIMQAEVPHKFKLPTFSGKRSKKTTVQPTDHQTETRG--KLNGYITCFSNEALQVEGYDDGMALP-RQWYNKLPRKSIGSFKELSR

Query:  IFATQFLGARDRRKPQFNLLTIKQRLGES
        +F   F+  R+R+K   +L TI Q+  ES
Subjt:  IFATQFLGARDRRKPQFNLLTIKQRLGES

GFZ19531.1 hypothetical protein Acr_28g0002360 [Actinidia rufa]5.3e-0933.59Show/hide
Query:  LEDLTEQVDPPFTDEIMQAEVPHKFKLPTFSGKRSKKTTVQPTDHQTETRGKLNGYITCFS----NEALQVEGYDDGMALP-RQWYNKLPRKSIGSFKEL
        ++ L  Q DPPFT+ +++  +  KFKLPT  G    KT   P DH       L+ Y +  S    ++ +  + +   +  P R W+ KL   ++ SF EL
Subjt:  LEDLTEQVDPPFTDEIMQAEVPHKFKLPTFSGKRSKKTTVQPTDHQTETRGKLNGYITCFS----NEALQVEGYDDGMALP-RQWYNKLPRKSIGSFKEL

Query:  SRIFATQFLGARDRRKPQFNLLTIKQRLGES
        SR+F   F+  R+R+K  F+L T+ Q+  ES
Subjt:  SRIFATQFLGARDRRKPQFNLLTIKQRLGES

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.8e-1031.54Show/hide
Query:  EEEIGETYSVTS--KIQKPEGDKEFDLKDLGPSKRVERKG----ALDAPDGTNTVGSRKMAEVEARIRAEIELEARVWAEVEARVRAEAKAATKAKVE--
        +E + E  ++T+    QK     E    D  P  R  +KG      D  + TN+VGS+       RI        R++   + + + ++ A    K +  
Subjt:  EEEIGETYSVTS--KIQKPEGDKEFDLKDLGPSKRVERKG----ALDAPDGTNTVGSRKMAEVEARIRAEIELEARVWAEVEARVRAEAKAATKAKVE--

Query:  ---AEAEAKFKARVLG---NTQLRDADKE---NLEDLTEQVDPPFTDEIMQAEVPHKFKLPTFSGKRSKKTTVQPTDHQTETRGKLNGYITCFSNEALQV
           +E  +  K +      +++ R + KE   +LE+L +Q D PFT+EIM+ +VP KFKLPT    +    T  P DH    R  ++ Y     +EA++ 
Subjt:  ---AEAEAKFKARVLG---NTQLRDADKE---NLEDLTEQVDPPFTDEIMQAEVPHKFKLPTFSGKRSKKTTVQPTDHQTETRGKLNGYITCFSNEALQV

Query:  EGYDDGM-ALPRQWYNKLPRKSIGSFKELSRIFATQFLGARDRRKPQFNLLTIKQRLGES
          +   +    R W+ +L R SI SFK L+R F TQF+G R R +P   LLTIKQR  ES
Subjt:  EGYDDGM-ALPRQWYNKLPRKSIGSFKELSRIFATQFLGARDRRKPQFNLLTIKQRLGES

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]1.2e-1341.61Show/hide
Query:  NLEDLTEQVDPPFTDEIMQAEVPHKFKLPTFSGKRSKKTTVQPTDHQTETRGKLNGYITCFSNEALQVEGYDDGM----------ALPRQWYNKLPRKSI
        +LE+L  Q D PFT+EIM+ +VP KFKLP          TV+P D  TE    L+ Y      E + + G  D +             R W+ +L R SI
Subjt:  NLEDLTEQVDPPFTDEIMQAEVPHKFKLPTFSGKRSKKTTVQPTDHQTETRGKLNGYITCFSNEALQVEGYDDGM----------ALPRQWYNKLPRKSI

Query:  GSFKELSRIFATQFLGARDRRKPQFNLLTIKQRLGES
         SFK L+R F TQF+G R R +P   LLTIKQR  ES
Subjt:  GSFKELSRIFATQFLGARDRRKPQFNLLTIKQRLGES

TrEMBL top hitse value%identityAlignment
A0A7J0DFI5 Retrotrans_gag domain-containing protein6.8e-1034.65Show/hide
Query:  LEDLTEQVDPPFTDEIMQAEVPHKFKLPTFSGKRSKKTTVQPTDHQTETRGKLNGYITCFSNEALQVEGYDDGMALP-RQWYNKLPRKSIGSFKELSRIF
        ++ L  Q DPPFT+ ++ A +  KFKLPT  G   +KT   P DH    +  +  ++   S+E +  + +   +  P R W+ KL   +I  F ELSR+F
Subjt:  LEDLTEQVDPPFTDEIMQAEVPHKFKLPTFSGKRSKKTTVQPTDHQTETRGKLNGYITCFSNEALQVEGYDDGMALP-RQWYNKLPRKSIGSFKELSRIF

Query:  ATQFLGARDRRKPQFNLLTIKQRLGES
           F+  R+R+K  F+L T+ Q+  ES
Subjt:  ATQFLGARDRRKPQFNLLTIKQRLGES

A0A7J0DWN5 Retrotrans_gag domain-containing protein1.5e-0934.88Show/hide
Query:  LEDLTEQVDPPFTDEIMQAEVPHKFKLPTFSGKRSKKTTVQPTDHQTETRG--KLNGYITCFSNEALQVEGYDDGMALP-RQWYNKLPRKSIGSFKELSR
        ++ L +Q++PPFT+ I++A +  KFKLPT  G    KT   P DH    +    L GY     ++ +  + +   +  P R W+ KL   +I SF +LSR
Subjt:  LEDLTEQVDPPFTDEIMQAEVPHKFKLPTFSGKRSKKTTVQPTDHQTETRG--KLNGYITCFSNEALQVEGYDDGMALP-RQWYNKLPRKSIGSFKELSR

Query:  IFATQFLGARDRRKPQFNLLTIKQRLGES
        +F   F+  R+R+K   +L TI Q+  ES
Subjt:  IFATQFLGARDRRKPQFNLLTIKQRLGES

A0A7J0FEI4 Ribonuclease H2.6e-0935.71Show/hide
Query:  LEDLTEQVDPPFTDEIMQAEVPHKFKLPTFSGKRSKKTTVQPTDHQTETRGKLNGYITCFSNEALQVEGYDDGMALPRQWYNKLPRKSIGSFKELSRIFA
        ++ L +Q +PPFT+ I++A +  KFKLPT  G    KT   P DH    +  +  Y+   S+E +            R W+ KL   +I SF ELSR+F 
Subjt:  LEDLTEQVDPPFTDEIMQAEVPHKFKLPTFSGKRSKKTTVQPTDHQTETRGKLNGYITCFSNEALQVEGYDDGMALPRQWYNKLPRKSIGSFKELSRIFA

Query:  TQFLGARDRRKPQFNLLTIKQRLGES
          F+  R+R+K   +L TI Q+  ES
Subjt:  TQFLGARDRRKPQFNLLTIKQRLGES

A0A7J0H9A6 Retrotrans_gag domain-containing protein2.6e-0933.59Show/hide
Query:  LEDLTEQVDPPFTDEIMQAEVPHKFKLPTFSGKRSKKTTVQPTDHQTETRGKLNGYITCFS----NEALQVEGYDDGMALP-RQWYNKLPRKSIGSFKEL
        ++ L  Q DPPFT+ +++  +  KFKLPT  G    KT   P DH       L+ Y +  S    ++ +  + +   +  P R W+ KL   ++ SF EL
Subjt:  LEDLTEQVDPPFTDEIMQAEVPHKFKLPTFSGKRSKKTTVQPTDHQTETRGKLNGYITCFS----NEALQVEGYDDGMALP-RQWYNKLPRKSIGSFKEL

Query:  SRIFATQFLGARDRRKPQFNLLTIKQRLGES
        SR+F   F+  R+R+K  F+L T+ Q+  ES
Subjt:  SRIFATQFLGARDRRKPQFNLLTIKQRLGES

A0A7J0HE65 Retrotrans_gag domain-containing protein2.6e-0933.86Show/hide
Query:  LEDLTEQVDPPFTDEIMQAEVPHKFKLPTFSGKRSKKTTVQPTDHQTETRGKLNGYITCFSNEALQVEGYDDGMALP-RQWYNKLPRKSIGSFKELSRIF
        ++ L  Q+DPPFT+ +++  +  KFKLPT  G    KT   P DH    +G ++  +   S+E +  + +   +  P R W+ KL   ++ SF ELSR+F
Subjt:  LEDLTEQVDPPFTDEIMQAEVPHKFKLPTFSGKRSKKTTVQPTDHQTETRGKLNGYITCFSNEALQVEGYDDGMALP-RQWYNKLPRKSIGSFKELSRIF

Query:  ATQFLGARDRRKPQFNLLTIKQRLGES
           F+  R+R+K   +L T+ Q+  ES
Subjt:  ATQFLGARDRRKPQFNLLTIKQRLGES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCAGAGCTTAGCCGAGATTCTAAACATCATGAAACAGCCGAATCCCAGCATGAAGTACCAAAAGAGCCTCGTACGTGATCAAGAGAAAGGGAAAGAGGTCTTGGA
AGAAGAAATAGGGGAAACATACAGTGTTACCAGTAAAATACAGAAACCAGAGGGTGACAAGGAATTTGACTTGAAGGATCTAGGTCCGAGCAAACGGGTGGAACGTAAGG
GTGCACTTGACGCTCCAGACGGAACCAATACAGTGGGTTCACGCAAGATGGCCGAGGTCGAGGCCAGAATTCGGGCAGAGATCGAACTTGAAGCGAGAGTCTGGGCCGAA
GTTGAGGCTAGGGTGAGGGCTGAAGCTAAAGCTGCGACCAAAGCTAAGGTTGAGGCTGAGGCCGAGGCCAAATTTAAGGCTAGGGTTCTGGGAAACACACAACTCAGGGA
TGCAGACAAAGAGAATCTAGAGGATCTAACTGAGCAAGTCGATCCACCATTTACTGACGAGATCATGCAGGCAGAAGTTCCACACAAGTTCAAGTTACCGACTTTCTCGG
GCAAGAGATCGAAGAAAACCACAGTTCAACCTACTGACCATCAAACAGAGACTCGGGGAAAGCTAAACGGATATATCACTTGCTTCAGTAATGAGGCGTTACAGGTGGAA
GGGTACGATGATGGTATGGCTCTACCACGACAGTGGTACAACAAATTGCCACGGAAGTCCATCGGGTCATTCAAGGAGTTATCGCGAATTTTTGCCACACAGTTTTTGGG
GGCAAGAGATCGAAGAAAACCACAGTTCAACCTACTGACCATCAAACAGAGACTCGGGGAAAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCAGAGCTTAGCCGAGATTCTAAACATCATGAAACAGCCGAATCCCAGCATGAAGTACCAAAAGAGCCTCGTACGTGATCAAGAGAAAGGGAAAGAGGTCTTGGA
AGAAGAAATAGGGGAAACATACAGTGTTACCAGTAAAATACAGAAACCAGAGGGTGACAAGGAATTTGACTTGAAGGATCTAGGTCCGAGCAAACGGGTGGAACGTAAGG
GTGCACTTGACGCTCCAGACGGAACCAATACAGTGGGTTCACGCAAGATGGCCGAGGTCGAGGCCAGAATTCGGGCAGAGATCGAACTTGAAGCGAGAGTCTGGGCCGAA
GTTGAGGCTAGGGTGAGGGCTGAAGCTAAAGCTGCGACCAAAGCTAAGGTTGAGGCTGAGGCCGAGGCCAAATTTAAGGCTAGGGTTCTGGGAAACACACAACTCAGGGA
TGCAGACAAAGAGAATCTAGAGGATCTAACTGAGCAAGTCGATCCACCATTTACTGACGAGATCATGCAGGCAGAAGTTCCACACAAGTTCAAGTTACCGACTTTCTCGG
GCAAGAGATCGAAGAAAACCACAGTTCAACCTACTGACCATCAAACAGAGACTCGGGGAAAGCTAAACGGATATATCACTTGCTTCAGTAATGAGGCGTTACAGGTGGAA
GGGTACGATGATGGTATGGCTCTACCACGACAGTGGTACAACAAATTGCCACGGAAGTCCATCGGGTCATTCAAGGAGTTATCGCGAATTTTTGCCACACAGTTTTTGGG
GGCAAGAGATCGAAGAAAACCACAGTTCAACCTACTGACCATCAAACAGAGACTCGGGGAAAGCTAA
Protein sequenceShow/hide protein sequence
MGQSLAEILNIMKQPNPSMKYQKSLVRDQEKGKEVLEEEIGETYSVTSKIQKPEGDKEFDLKDLGPSKRVERKGALDAPDGTNTVGSRKMAEVEARIRAEIELEARVWAE
VEARVRAEAKAATKAKVEAEAEAKFKARVLGNTQLRDADKENLEDLTEQVDPPFTDEIMQAEVPHKFKLPTFSGKRSKKTTVQPTDHQTETRGKLNGYITCFSNEALQVE
GYDDGMALPRQWYNKLPRKSIGSFKELSRIFATQFLGARDRRKPQFNLLTIKQRLGES