CuGenDBv2

Gene ID	Lag0025515
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	PMD domain-containing protein
Genome location	chr10:14165519..14168816
RNA-Seq Expression	Lag0025515
Synteny	Lag0025515
Gene Ontology terms	NA
InterPro domains	IPR019557 - Aminotransferase-like, plant mobile domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0041618.1 hypothetical protein E6C27_scaffold93G00910 [Cucumis melo var. makuwa]

1.1e-52

52.22

Show/hide

Query:  MVCFAEHIVSEKTYLVLLKDNNQPTRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNWSVERPLDQDSKAWFLESSIHTQNPNRHPEVTLGRRIIDGSVRW
        MV F E  +S   +LV+L D NQP   GLS +VEK   G  A  WP   N   +   SVE PL +   AW L+SSIH + PN    +TLG+R+I+G  RW
Subjt:  MVCFAEHIVSEKTYLVLLKDNNQPTRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNWSVERPLDQDSKAWFLESSIHTQNPNRHPEVTLGRRIIDGSVRW

Query:  ESALKISSEFLFIPRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIRA-LQELTIP
         +  K+  EF F   Y EWLE VVGR+  +L++ +L   V ASLYTYDRN+D+VRAFCEAWCP+TNTLHT  GELSISLWDLW+  GLPI+    E  IP
Subjt:  ESALKISSEFLFIPRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIRA-LQELTIP

Query:  MFQ
         F+
Subjt:  MFQ

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]

1.2e-54

53.69

Show/hide

Query:  MVCFAEHIVSEKTYLVLLKDNNQPTRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNWSVERPLDQDSKAWFLESSIHTQNPNRHPEVTLGRRIIDGSVRW
        MV F E  +S   +LV+L D NQP   GLS +VEKP  G  A  WP   N   +   SVE PL +   AW L+SSIH + PN    +TLG+R+I+G  RW
Subjt:  MVCFAEHIVSEKTYLVLLKDNNQPTRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNWSVERPLDQDSKAWFLESSIHTQNPNRHPEVTLGRRIIDGSVRW

Query:  ESALKISSEFLFIPRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIRA-LQELTIP
         +  K+  EF F   Y EWLE VVGR+  +L++  L  AV ASLYTYDRN+D+VRAFCEAWCP+TNTLHT  GELSISLWDLW+ GGLPI+    E  IP
Subjt:  ESALKISSEFLFIPRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIRA-LQELTIP

Query:  MFQ
         F+
Subjt:  MFQ

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]

2.1e-54

53.69

Show/hide

Query:  MVCFAEHIVSEKTYLVLLKDNNQPTRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNWSVERPLDQDSKAWFLESSIHTQNPNRHPEVTLGRRIIDGSVRW
        MV F E  +S   +LV+L D NQP   GLS +VEKP  G  A  WP   N   +   SVE PL +   AW L+SSIH + PN    +TLG+R+I+G  RW
Subjt:  MVCFAEHIVSEKTYLVLLKDNNQPTRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNWSVERPLDQDSKAWFLESSIHTQNPNRHPEVTLGRRIIDGSVRW

Query:  ESALKISSEFLFIPRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIRA-LQELTIP
         +  K+  EF F   Y EWLE VVGR+  +L++  L  AV ASLYTYDRN+D+VRAFCEAWCP+TNTLHT  GELSISLWDLW+ GGLPI+    E  IP
Subjt:  ESALKISSEFLFIPRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIRA-LQELTIP

Query:  MFQ
         F+
Subjt:  MFQ

TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]

1.1e-52

52.22

Show/hide

Query:  MVCFAEHIVSEKTYLVLLKDNNQPTRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNWSVERPLDQDSKAWFLESSIHTQNPNRHPEVTLGRRIIDGSVRW
        MV F E  +S   +LV+L D NQP   GLS +VEK   G  A  WP   N   +   SVE PL +   AW L+SSIH + PN    +TLG+R+I+G  RW
Subjt:  MVCFAEHIVSEKTYLVLLKDNNQPTRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNWSVERPLDQDSKAWFLESSIHTQNPNRHPEVTLGRRIIDGSVRW

Query:  ESALKISSEFLFIPRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIRA-LQELTIP
         +  K+  EF F   Y EWLE VVGR+  +L++ +L   V ASLYTYDRN+D+VRAFCEAWCP+TNTLHT  GELSISLWDLW+  GLPI+    E  IP
Subjt:  ESALKISSEFLFIPRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIRA-LQELTIP

Query:  MFQ
         F+
Subjt:  MFQ

TYK20969.1 hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa]

2.5e-52

54.45

Show/hide

Query:  MVCFAEHIVSEKTYLVLLKDNNQPTRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNWSVERPLDQDSKAWFLESSIHTQNPNRHPEVTLGRRIIDGSVRW
        MV F E  +S   +LV+L D NQP   GLS +VEKP  G  A  WP   N   +   SVE  L +   AW L+SSIH + PN    +TLG+R+I+G  RW
Subjt:  MVCFAEHIVSEKTYLVLLKDNNQPTRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNWSVERPLDQDSKAWFLESSIHTQNPNRHPEVTLGRRIIDGSVRW

Query:  ESALKISSEFLFIPRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIR
         +  K+  EF FI  Y EWLE VVGR+  +L++  L  AV ASLYTYD N+D+VRAFCEAWCP+TNTLHT  GELSISLWDLW+ GGLPI+
Subjt:  ESALKISSEFLFIPRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIR

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TFC8 PMD domain-containing protein

5.5e-53

52.22

Show/hide

Query:  MVCFAEHIVSEKTYLVLLKDNNQPTRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNWSVERPLDQDSKAWFLESSIHTQNPNRHPEVTLGRRIIDGSVRW
        MV F E  +S   +LV+L D NQP   GLS +VEK   G  A  WP   N   +   SVE PL +   AW L+SSIH + PN    +TLG+R+I+G  RW
Subjt:  MVCFAEHIVSEKTYLVLLKDNNQPTRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNWSVERPLDQDSKAWFLESSIHTQNPNRHPEVTLGRRIIDGSVRW

Query:  ESALKISSEFLFIPRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIRA-LQELTIP
         +  K+  EF F   Y EWLE VVGR+  +L++ +L   V ASLYTYDRN+D+VRAFCEAWCP+TNTLHT  GELSISLWDLW+  GLPI+    E  IP
Subjt:  ESALKISSEFLFIPRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIRA-LQELTIP

Query:  MFQ
         F+
Subjt:  MFQ

A0A5A7TX42 Uncharacterized protein

5.9e-55

53.69

Show/hide

Query:  MVCFAEHIVSEKTYLVLLKDNNQPTRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNWSVERPLDQDSKAWFLESSIHTQNPNRHPEVTLGRRIIDGSVRW
        MV F E  +S   +LV+L D NQP   GLS +VEKP  G  A  WP   N   +   SVE PL +   AW L+SSIH + PN    +TLG+R+I+G  RW
Subjt:  MVCFAEHIVSEKTYLVLLKDNNQPTRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNWSVERPLDQDSKAWFLESSIHTQNPNRHPEVTLGRRIIDGSVRW

Query:  ESALKISSEFLFIPRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIRA-LQELTIP
         +  K+  EF F   Y EWLE VVGR+  +L++  L  AV ASLYTYDRN+D+VRAFCEAWCP+TNTLHT  GELSISLWDLW+ GGLPI+    E  IP
Subjt:  ESALKISSEFLFIPRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIRA-LQELTIP

Query:  MFQ
         F+
Subjt:  MFQ

A0A5A7U8X8 PMD domain-containing protein

1.2e-52

54.45

Show/hide

Query:  MVCFAEHIVSEKTYLVLLKDNNQPTRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNWSVERPLDQDSKAWFLESSIHTQNPNRHPEVTLGRRIIDGSVRW
        MV F E  +S   +LV+L D NQP   GLS +VEKP  G  A  WP   N   +   SVE  L +   AW L+SSIH + PN    +TLG+R+I+G  RW
Subjt:  MVCFAEHIVSEKTYLVLLKDNNQPTRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNWSVERPLDQDSKAWFLESSIHTQNPNRHPEVTLGRRIIDGSVRW

Query:  ESALKISSEFLFIPRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIR
         +  K+  EF FI  Y EWLE VVGR+  +L++  L  AV ASLYTYD N+D+VRAFCEAWCP+TNTLHT  GELSISLWDLW+ GGLPI+
Subjt:  ESALKISSEFLFIPRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIR

A0A5A7VHW8 PMD domain-containing protein

1.0e-54

53.69

Show/hide

Query:  MVCFAEHIVSEKTYLVLLKDNNQPTRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNWSVERPLDQDSKAWFLESSIHTQNPNRHPEVTLGRRIIDGSVRW
        MV F E  +S   +LV+L D NQP   GLS +VEKP  G  A  WP   N   +   SVE PL +   AW L+SSIH + PN    +TLG+R+I+G  RW
Subjt:  MVCFAEHIVSEKTYLVLLKDNNQPTRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNWSVERPLDQDSKAWFLESSIHTQNPNRHPEVTLGRRIIDGSVRW

Query:  ESALKISSEFLFIPRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIRA-LQELTIP
         +  K+  EF F   Y EWLE VVGR+  +L++  L  AV ASLYTYDRN+D+VRAFCEAWCP+TNTLHT  GELSISLWDLW+ GGLPI+    E  IP
Subjt:  ESALKISSEFLFIPRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIRA-LQELTIP

Query:  MFQ
         F+
Subjt:  MFQ

A0A5D3D7V4 PMD domain-containing protein

5.5e-53

52.22

Show/hide

Query:  MVCFAEHIVSEKTYLVLLKDNNQPTRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNWSVERPLDQDSKAWFLESSIHTQNPNRHPEVTLGRRIIDGSVRW
        MV F E  +S   +LV+L D NQP   GLS +VEK   G  A  WP   N   +   SVE PL +   AW L+SSIH + PN    +TLG+R+I+G  RW
Subjt:  MVCFAEHIVSEKTYLVLLKDNNQPTRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNWSVERPLDQDSKAWFLESSIHTQNPNRHPEVTLGRRIIDGSVRW

Query:  ESALKISSEFLFIPRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIRA-LQELTIP
         +  K+  EF F   Y EWLE VVGR+  +L++ +L   V ASLYTYDRN+D+VRAFCEAWCP+TNTLHT  GELSISLWDLW+  GLPI+    E  IP
Subjt:  ESALKISSEFLFIPRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIRA-LQELTIP

Query:  MFQ
         F+
Subjt:  MFQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G32120.1 FUNCTIONS IN: molecular_function unknown

2.2e-06

32.88

Show/hide

Query:  EWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPI
        EW+  +      V   + + DA++AS Y   R++D++ A  E WC  TNT     GE +++L D+  +GGL +
Subjt:  EWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPI

AT1G50750.1 Plant mobile domain protein family

1.3e-06

28.95

Show/hide

Query:  RYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPI
        ++  W   +    E     A + +AVMAS+Y   +N D++    E WCP T T     GE +++L D+  + G  +
Subjt:  RYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPI

AT1G50790.1 Plant mobile domain protein family

4.5e-07

30.26

Show/hide

Query:  RYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPI
        +++ W   +    E +   A + +A++AS Y   +N D+V    E WCP TNT     GE +I+L D+  + G  +
Subjt:  RYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPI

AT1G50820.1 Aminotransferase-like, plant mobile domain family protein

2.9e-06

29.11

Show/hide

Query:  RYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIRAL
        ++  W   +    E +   A + +AV+AS Y   ++ D+V    E WCP T T     GE +I+L D+  + G  +  L
Subjt:  RYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIRAL

AT1G51538.1 Aminotransferase-like, plant mobile domain family protein

6.5e-06

26.92

Show/hide

Query:  PRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIR
        P +  W + +    E +   A + +A+ AS+Y   +N  ++ A  E WCP T +     GE +I+L D+  + G  ++
Subjt:  PRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNTLHTHVGELSISLWDLWTIGGLPIR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGGTACAACGTCTTTCAACACGAGTACAAGGACGTGTTCCTTGCGTTGGGACATGTTCCTTGGACTTGTGTCACCGCCACGCCTTTCGAGTGTAAGGACGTGTTCCT
TGAGTTGGGACATGTTCCTTGGACTTGTGTCGCTGCCACGCCTTCCAGCACGAGTGTGAGGACTTGTTCCTGGCGTTGGGACATGTTCCTTGGACTTGTGTCGCCGCCAC
GCCTTTCAGCACGAGTGCGAGGACTTGTTCCTGGCGTTGGGACATGTTCCTTGGACTTGTGTCGCCGCCACGCCTTTCAGCACGAGTGCAAGGACGTGTTCCTTGAGTTG
GGACATACTTTTGTCGCCGCCACGCCTTTCAACACGAGTGCAAGGACGTGTTCCTTGCGTTGGGACATGTTCCTTGGACTTGTATCGCCGCCACGCCTTGTGCGAGGACT
TGTTCCTGGCGTTGGGACATGTTCCTTGGACTTGTGTCGCCGCCACGCCTTTCAGCACGAGTGCAAGGACGTGTTCCTTGAGTTGGGACATGTTCCTTGGACTTGTGTCA
CTGCCACGCCTTTCAGCACGAGTGCAAGGACGTGTTCCTTGAGTTGGGACATGTTCCTTGGACTTGTGTCGCCGCCACGCCTTTCAGCACGAGTGCGAGGACTTGTTCCT
GACGTTGGGACATGTTCCTTGGACTTGTGTCGCCGCCACGCCTTTCAACACGAGTGCAAGGACGTGTTCCTTGCGTTGGGACATGTTCCTTGGACTTGTGTCGCCGCCAC
GCCTTTCAGCACGAGTGCAAGGACGTGTTCCTTGCGTTGGGACATAATCATGGTGTGTTTTGCAGAACATATTGTTTCTGAAAAAACGTACCTTGTTCTTCTGAAAGACA
ACAATCAACCCACAAGAAGCGGACTCAGCTTCTTAGTAGAAAAACCTATGACTGGACGTCTTGCAGCCCCATGGCCCCCACCACTAAATTTGCATACCATTTCTAATTGG
TCCGTAGAAAGGCCTCTAGACCAAGATTCTAAGGCTTGGTTTCTAGAATCTTCAATCCATACACAAAATCCTAACCGACATCCAGAGGTGACGTTAGGGCGCCGAATAAT
TGATGGATCAGTTCGTTGGGAATCCGCCTTGAAAATTTCAAGTGAATTTCTTTTCATTCCTCGCTATTCAGAGTGGTTAGAATCTGTCGTTGGTCGGAGTGAAGAGGTGC
TTCATAATGCTTATTTATTGGATGCAGTAATGGCTTCCCTTTACACTTATGATCGAAACAATGACATAGTTCGGGCTTTTTGTGAAGCCTGGTGTCCTGCAACCAATACG
CTTCACACTCATGTGGGAGAACTTTCTATTTCCTTATGGGACCTTTGGACCATTGGGGGTTTGCCCATTAGAGCGCTTCAAGAGCTGACCATTCCCATGTTCCAATTAGC
TCCTGGATTTAATTCTGGTTCAAGGGTGAACAGAGGTACGCAAAGCCTCCTCAACGGAGACCCAGGAAGCACTCTCGCCCTAGCACGACTCATAACCCAGACGGCACAAA
TATTAAGCGAGGCGAGTGGTCAGATGAGGAGAACAACTTGTTTCGCGGGCTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MRYNVFQHEYKDVFLALGHVPWTCVTATPFECKDVFLELGHVPWTCVAATPSSTSVRTCSWRWDMFLGLVSPPRLSARVRGLVPGVGTCSLDLCRRHAFQHECKDVFLEL
GHTFVAATPFNTSARTCSLRWDMFLGLVSPPRLVRGLVPGVGTCSLDLCRRHAFQHECKDVFLELGHVPWTCVTATPFSTSARTCSLSWDMFLGLVSPPRLSARVRGLVP
DVGTCSLDLCRRHAFQHECKDVFLALGHVPWTCVAATPFSTSARTCSLRWDIIMVCFAEHIVSEKTYLVLLKDNNQPTRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNW
SVERPLDQDSKAWFLESSIHTQNPNRHPEVTLGRRIIDGSVRWESALKISSEFLFIPRYSEWLESVVGRSEEVLHNAYLLDAVMASLYTYDRNNDIVRAFCEAWCPATNT
LHTHVGELSISLWDLWTIGGLPIRALQELTIPMFQLAPGFNSGSRVNRGTQSLLNGDPGSTLALARLITQTAQILSEASGQMRRTTCFAG

Lag0025515 (gene) of Sponge gourd (AG-4) v1 genome