; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025519 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025519
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr10:14223399..14230021
RNA-Seq ExpressionLag0025519
SyntenyLag0025519
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6734747.1 hypothetical protein I3842_01G285500 [Carya illinoinensis]8.1e-3760.34Show/hide
Query:  YRGSPTEDPNSHVKSFLDICGTVELNGVSKDVIHLRLFPFSLQDKARDWLQSIPPGSITTWDALVQAFLKKFFPPTKTVKLRTEIGMFQQQFYEQLLEPW
        + GSP +DPN H+  FL+IC TV++NGV++D I LRLFPFSL+DKAR WLQS+ PGSI +W  + + FL KFFPP KT +LR+EIG F+Q  +E L E W
Subjt:  YRGSPTEDPNSHVKSFLDICGTVELNGVSKDVIHLRLFPFSLQDKARDWLQSIPPGSITTWDALVQAFLKKFFPPTKTVKLRTEIGMFQQQFYEQLLEPW

Query:  ERFKELLRKCPQHGYP
        ER+K+L+R+CPQHG P
Subjt:  ERFKELLRKCPQHGYP

KAG7947748.1 hypothetical protein I3843_14G109500 [Carya illinoinensis]8.1e-3760.34Show/hide
Query:  YRGSPTEDPNSHVKSFLDICGTVELNGVSKDVIHLRLFPFSLQDKARDWLQSIPPGSITTWDALVQAFLKKFFPPTKTVKLRTEIGMFQQQFYEQLLEPW
        + GSP +DPN H+  FL+IC TV++NGV++D I LRLFPFSL+DKAR WLQS+ PGSI +W  + + FL KFFPP KT +LR+EIG F+Q  +E L E W
Subjt:  YRGSPTEDPNSHVKSFLDICGTVELNGVSKDVIHLRLFPFSLQDKARDWLQSIPPGSITTWDALVQAFLKKFFPPTKTVKLRTEIGMFQQQFYEQLLEPW

Query:  ERFKELLRKCPQHGYP
        ER+K+L+R+CPQHG P
Subjt:  ERFKELLRKCPQHGYP

KAG7990634.1 hypothetical protein I3843_02G035100 [Carya illinoinensis]8.1e-3760.34Show/hide
Query:  YRGSPTEDPNSHVKSFLDICGTVELNGVSKDVIHLRLFPFSLQDKARDWLQSIPPGSITTWDALVQAFLKKFFPPTKTVKLRTEIGMFQQQFYEQLLEPW
        + GSP +DPN H+  FL+IC TV++NGV++D I LRLFPFSL+DKAR WLQS+ PGSI +W  + + FL KFFPP KT +LR+EIG F+Q  +E L E W
Subjt:  YRGSPTEDPNSHVKSFLDICGTVELNGVSKDVIHLRLFPFSLQDKARDWLQSIPPGSITTWDALVQAFLKKFFPPTKTVKLRTEIGMFQQQFYEQLLEPW

Query:  ERFKELLRKCPQHGYP
        ER+K+L+R+CPQHG P
Subjt:  ERFKELLRKCPQHGYP

WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]1.4e-4167.52Show/hide
Query:  AYRGSPTEDPNSHVKSFLDICGTVELNGVSKDVIHLRLFPFSLQDKARDWLQSIPPGSITTWDALVQAFLKKFFPPTKTVKLRTEIGMFQQQFYEQLLEP
        A+RG   EDP+ H++SFL+ICGTV++NGVS D I LRLFPFSLQD+A+DWL++IPP SITTW+ L QAFL K+FPP K+ +LRTEIG F+Q   EQL E 
Subjt:  AYRGSPTEDPNSHVKSFLDICGTVELNGVSKDVIHLRLFPFSLQDKARDWLQSIPPGSITTWDALVQAFLKKFFPPTKTVKLRTEIGMFQQQFYEQLLEP

Query:  WERFKELLRKCPQHGYP
        WER+K+LLR+CPQHGYP
Subjt:  WERFKELLRKCPQHGYP

XP_023903214.1 uncharacterized protein LOC112015077 [Quercus suber]8.1e-3761.21Show/hide
Query:  YRGSPTEDPNSHVKSFLDICGTVELNGVSKDVIHLRLFPFSLQDKARDWLQSIPPGSITTWDALVQAFLKKFFPPTKTVKLRTEIGMFQQQFYEQLLEPW
        + GSP +DPN H+  FL+IC TV++NGV++D I LRLFPFSL+DKAR WLQS+ PGSIT+W  + + FL KFFPP KT +LR+EIG F+Q  +E L E W
Subjt:  YRGSPTEDPNSHVKSFLDICGTVELNGVSKDVIHLRLFPFSLQDKARDWLQSIPPGSITTWDALVQAFLKKFFPPTKTVKLRTEIGMFQQQFYEQLLEPW

Query:  ERFKELLRKCPQHGYP
        ER+K+L+R CPQHG P
Subjt:  ERFKELLRKCPQHGYP

TrEMBL top hitse value%identityAlignment
A0A2I4G4Q3 uncharacterized protein LOC1090047128.1e-3557.76Show/hide
Query:  YRGSPTEDPNSHVKSFLDICGTVELNGVSKDVIHLRLFPFSLQDKARDWLQSIPPGSITTWDALVQAFLKKFFPPTKTVKLRTEIGMFQQQFYEQLLEPW
        + GSP +DPN H+  FL+IC TV++NGV++D I LRLFPFSL+D+AR WLQS+ P SIT+W  + + F  KFFPP KT +LR+EIG F+Q  +E L E W
Subjt:  YRGSPTEDPNSHVKSFLDICGTVELNGVSKDVIHLRLFPFSLQDKARDWLQSIPPGSITTWDALVQAFLKKFFPPTKTVKLRTEIGMFQQQFYEQLLEPW

Query:  ERFKELLRKCPQHGYP
        E +K+L+R+CPQHG P
Subjt:  ERFKELLRKCPQHGYP

A0A3S3N117 Retrotrans_gag domain-containing protein1.8e-3457.76Show/hide
Query:  YRGSPTEDPNSHVKSFLDICGTVELNGVSKDVIHLRLFPFSLQDKARDWLQSIPPGSITTWDALVQAFLKKFFPPTKTVKLRTEIGMFQQQFYEQLLEPW
        + G P +DPN+H+ +FL++C T + NGV+ D + LRL PFSL+DKA+ WL S+P  +ITTWD L + FL KFFPPTKTVK+R +I  F Q   E L E W
Subjt:  YRGSPTEDPNSHVKSFLDICGTVELNGVSKDVIHLRLFPFSLQDKARDWLQSIPPGSITTWDALVQAFLKKFFPPTKTVKLRTEIGMFQQQFYEQLLEPW

Query:  ERFKELLRKCPQHGYP
        ER+KELLRKCP HG P
Subjt:  ERFKELLRKCPQHGYP

A0A6J0ZX64 LOW QUALITY PROTEIN: uncharacterized protein LOC1104129458.1e-3561.21Show/hide
Query:  YRGSPTEDPNSHVKSFLDICGTVELNGVSKDVIHLRLFPFSLQDKARDWLQSIPPGSITTWDALVQAFLKKFFPPTKTVKLRTEIGMFQQQFYEQLLEPW
        + G P++DPNSH+ +FL+IC T + NGV+ D I LRLFPFSL+DKA+ WL S+P GSITTW+ L Q FL KFFPP KT K+R +I  F Q   E L E W
Subjt:  YRGSPTEDPNSHVKSFLDICGTVELNGVSKDVIHLRLFPFSLQDKARDWLQSIPPGSITTWDALVQAFLKKFFPPTKTVKLRTEIGMFQQQFYEQLLEPW

Query:  ERFKELLRKCPQHGYP
        ERFKELLR+CP HG P
Subjt:  ERFKELLRKCPQHGYP

A0A6J0ZYV0 uncharacterized protein LOC1104134138.1e-3561.21Show/hide
Query:  YRGSPTEDPNSHVKSFLDICGTVELNGVSKDVIHLRLFPFSLQDKARDWLQSIPPGSITTWDALVQAFLKKFFPPTKTVKLRTEIGMFQQQFYEQLLEPW
        + G P++DPNSH+ +FL+IC T + NGV+ D I LRLFPFSL+DKA+ WL S+P GSITTW+ L Q FL KFFPP KT K+R +I  F Q   E L E W
Subjt:  YRGSPTEDPNSHVKSFLDICGTVELNGVSKDVIHLRLFPFSLQDKARDWLQSIPPGSITTWDALVQAFLKKFFPPTKTVKLRTEIGMFQQQFYEQLLEPW

Query:  ERFKELLRKCPQHGYP
        ERFKELLR+CP HG P
Subjt:  ERFKELLRKCPQHGYP

A0A6P6XAQ1 Reverse transcriptase2.5e-3662.93Show/hide
Query:  YRGSPTEDPNSHVKSFLDICGTVELNGVSKDVIHLRLFPFSLQDKARDWLQSIPPGSITTWDALVQAFLKKFFPPTKTVKLRTEIGMFQQQFYEQLLEPW
        Y G+ TEDPNSH+ +FL+IC T++ NGVS+D I LRLFPFSL+DKA+ WLQS PP + TTWD L +AFL KFFPP KT KLR +I  F QQ  E L E W
Subjt:  YRGSPTEDPNSHVKSFLDICGTVELNGVSKDVIHLRLFPFSLQDKARDWLQSIPPGSITTWDALVQAFLKKFFPPTKTVKLRTEIGMFQQQFYEQLLEPW

Query:  ERFKELLRKCPQHGYP
        ER++EL R+CP HG P
Subjt:  ERFKELLRKCPQHGYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGGGTCAAATTACCGTTTTACCCCTGTGTTACATCTGTCTCCTTAAGTACCAGCGCTCCTCTAATGAACAACCTGTTTATGGTCTAACCATTAAACAGAAAGTCCTTCT
CTGGCCAGATACCCCCACTTGCATGTCTACTACATGGACGTTTTGGATCAATACGTCTGTATTAAATACAAAGCGGACCGTATCTCATAGTGTTACCAGGATAAGATCTC
ATACAGATGGAGGTTGTGCTTACAGAGGATCGCCTACCGAGGATCCGAATTCTCACGTGAAATCCTTCCTAGACATTTGTGGGACGGTAGAGTTAAATGGTGTTTCTAAA
GATGTCATTCACTTACGTTTGTTTCCTTTTTCGTTGCAAGACAAAGCGAGGGATTGGTTGCAATCGATTCCACCTGGGAGCATTACCACTTGGGATGCTTTGGTCCAGGC
ATTTTTGAAGAAATTTTTTCCTCCTACTAAGACGGTCAAGCTGAGGACTGAGATTGGGATGTTCCAGCAACAGTTTTATGAGCAGTTGTTAGAGCCTTGGGAGCGATTTA
AAGAGCTGCTGAGGAAATGCCCTCAGCATGGCTATCCCGGACTGGCTTCAGCTGCCCTTGCATCCCAGACTCAGGAGGAAAATCTCGAGCAAGTTCACTATAAAAACATA
GAAACTCAGCTGGGACAACTGGTAAGTGTTGTCAACACCATGAATAAAGGGAAAGCCCCAGCTGAACAAGAGAAATTTGCATTGGAGTACTGCAAGGCCATCATTGTGCA
TCACGAGGAGGAATTGCACATAACTGAGGAAGAGGAGACTACTGAACCAGAGGAACTCACTGAACCAGTAAACAAGTGCTTATGGGAGGCAACCCAATTAGGCCAACCTA
AGGGTAAAACTCGGGTTATGGGTCCTTGCAATAGGAATTATGTTTTGGAGCTAATCGTGTGTTCGGGGCATGAAAAGAGGCTAAAGAATCAAAGGGAATCGAAGTTGGAA
GCTCACCATTTAGGCTTTGTCGAGGACCAGCATCGAGACCCTTGCCAAAGGGCGTCTCGACGCTGCTGTTTGCTTCCTAGACGGATTCCTCCCGGAACTCCGGATCTTTT
GGAATGTGTTTCAACCCCAATGAAGTACGACCGATCAAGCACTAGGCAACTGGCTATCCTTAGCTCAGTCACTGGCGTTCACCAATACACAATGATCGTAGTGTGTTCTG
CTCCCAGTTTTTCTACAGCACAGAATTTGCTCCCTCTAGTCGCCCAGCAGCATAATCTGCACAAAAGAATTTCCAAAGCTTCCATTATTCTAAATGGGTTAAAACATGTT
GCAAGCAGGCTACAGCGATCGTCTCAGCAGGATACAACAACTAATTCTGGTAGAAAAGTAACCTTGAACTACTCGGATCTGGCAGAACTCTTGGATACTTGCTCTCAACT
CGACTCAAGATCAAAAGAAACAAAGAAAGAATGA
mRNA sequenceShow/hide mRNA sequence
CTGGGTCAAATTACCGTTTTACCCCTGTGTTACATCTGTCTCCTTAAGTACCAGCGCTCCTCTAATGAACAACCTGTTTATGGTCTAACCATTAAACAGAAAGTCCTTCT
CTGGCCAGATACCCCCACTTGCATGTCTACTACATGGACGTTTTGGATCAATACGTCTGTATTAAATACAAAGCGGACCGTATCTCATAGTGTTACCAGGATAAGATCTC
ATACAGATGGAGGTTGTGCTTACAGAGGATCGCCTACCGAGGATCCGAATTCTCACGTGAAATCCTTCCTAGACATTTGTGGGACGGTAGAGTTAAATGGTGTTTCTAAA
GATGTCATTCACTTACGTTTGTTTCCTTTTTCGTTGCAAGACAAAGCGAGGGATTGGTTGCAATCGATTCCACCTGGGAGCATTACCACTTGGGATGCTTTGGTCCAGGC
ATTTTTGAAGAAATTTTTTCCTCCTACTAAGACGGTCAAGCTGAGGACTGAGATTGGGATGTTCCAGCAACAGTTTTATGAGCAGTTGTTAGAGCCTTGGGAGCGATTTA
AAGAGCTGCTGAGGAAATGCCCTCAGCATGGCTATCCCGGACTGGCTTCAGCTGCCCTTGCATCCCAGACTCAGGAGGAAAATCTCGAGCAAGTTCACTATAAAAACATA
GAAACTCAGCTGGGACAACTGGTAAGTGTTGTCAACACCATGAATAAAGGGAAAGCCCCAGCTGAACAAGAGAAATTTGCATTGGAGTACTGCAAGGCCATCATTGTGCA
TCACGAGGAGGAATTGCACATAACTGAGGAAGAGGAGACTACTGAACCAGAGGAACTCACTGAACCAGTAAACAAGTGCTTATGGGAGGCAACCCAATTAGGCCAACCTA
AGGGTAAAACTCGGGTTATGGGTCCTTGCAATAGGAATTATGTTTTGGAGCTAATCGTGTGTTCGGGGCATGAAAAGAGGCTAAAGAATCAAAGGGAATCGAAGTTGGAA
GCTCACCATTTAGGCTTTGTCGAGGACCAGCATCGAGACCCTTGCCAAAGGGCGTCTCGACGCTGCTGTTTGCTTCCTAGACGGATTCCTCCCGGAACTCCGGATCTTTT
GGAATGTGTTTCAACCCCAATGAAGTACGACCGATCAAGCACTAGGCAACTGGCTATCCTTAGCTCAGTCACTGGCGTTCACCAATACACAATGATCGTAGTGTGTTCTG
CTCCCAGTTTTTCTACAGCACAGAATTTGCTCCCTCTAGTCGCCCAGCAGCATAATCTGCACAAAAGAATTTCCAAAGCTTCCATTATTCTAAATGGGTTAAAACATGTT
GCAAGCAGGCTACAGCGATCGTCTCAGCAGGATACAACAACTAATTCTGGTAGAAAAGTAACCTTGAACTACTCGGATCTGGCAGAACTCTTGGATACTTGCTCTCAACT
CGACTCAAGATCAAAAGAAACAAAGAAAGAATGA
Protein sequenceShow/hide protein sequence
MGQITVLPLCYICLLKYQRSSNEQPVYGLTIKQKVLLWPDTPTCMSTTWTFWINTSVLNTKRTVSHSVTRIRSHTDGGCAYRGSPTEDPNSHVKSFLDICGTVELNGVSK
DVIHLRLFPFSLQDKARDWLQSIPPGSITTWDALVQAFLKKFFPPTKTVKLRTEIGMFQQQFYEQLLEPWERFKELLRKCPQHGYPGLASAALASQTQEENLEQVHYKNI
ETQLGQLVSVVNTMNKGKAPAEQEKFALEYCKAIIVHHEEELHITEEEETTEPEELTEPVNKCLWEATQLGQPKGKTRVMGPCNRNYVLELIVCSGHEKRLKNQRESKLE
AHHLGFVEDQHRDPCQRASRRCCLLPRRIPPGTPDLLECVSTPMKYDRSSTRQLAILSSVTGVHQYTMIVVCSAPSFSTAQNLLPLVAQQHNLHKRISKASIILNGLKHV
ASRLQRSSQQDTTTNSGRKVTLNYSDLAELLDTCSQLDSRSKETKKE