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Lag0025525 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025525
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr10:14424340..14424825
RNA-Seq ExpressionLag0025525
SyntenyLag0025525
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG46781.1 hypothetical protein EZV62_026075 [Acer yangbiense]1.2e-0531.4Show/hide
Query:  MVPVLYERLPDFCYVCGCLGHVKREC-TSEAVVSAV-SVGDQYGEWMR------AGMMSGEGARRRYEGKGDEVKVSGDEGRVQVEQEGVTGVPRVEQDS
        + P++YERLP FCY CG LGHV REC   EA + A+  V  Q+G W+R            +   ++  G GD   +S  +G  +   E   G+   +  +
Subjt:  MVPVLYERLPDFCYVCGCLGHVKREC-TSEAVVSAV-SVGDQYGEWMR------AGMMSGEGARRRYEGKGDEVKVSGDEGRVQVEQEGVTGVPRVEQDS

Query:  PLSGGPTVGEVVHSSLDVEQE
          + G +VG     S +V ++
Subjt:  PLSGGPTVGEVVHSSLDVEQE

XP_015382973.1 uncharacterized protein LOC107175758 [Citrus sinensis]1.9e-0632.58Show/hide
Query:  VPVLYERLPDFCYVCGCLGHVKRECTSEAVVSAVSVGDQYGEWMRAGMMSGE-GARRRYEGKGDEVKVSGDEGRVQVEQEGVTGVPRVEQDSPLSGGPTV
        +PVLYERLPDFC+VCGC+GH  +EC      +   +   YG W+RA  M+ +    R  E   +E     +EG++    E  T + R +     S   + 
Subjt:  VPVLYERLPDFCYVCGCLGHVKRECTSEAVVSAVSVGDQYGEWMRAGMMSGE-GARRRYEGKGDEVKVSGDEGRVQVEQEGVTGVPRVEQDSPLSGGPTV

Query:  GEVVHSSLDVEQEHDVHGPN----KDPKGKQK
        GE+  S    ++E +  GP     ++PK  +K
Subjt:  GEVVHSSLDVEQEHDVHGPN----KDPKGKQK

XP_018852674.2 uncharacterized protein LOC109014626 [Juglans regia]1.1e-0627.93Show/hide
Query:  VPVLYERLPDFCYVCGCLGHVKRECTSEAVVSAVSVGDQYGEWMRAGMMSGEGARRRYE---------GKGDEVKVSGDE-------------GRVQVEQ
        +P+ YE LP FC+ CGCL H K  C +++V +     DQYG W+RA M  GE  +R  E         GKG  ++V GD+             G+  V +
Subjt:  VPVLYERLPDFCYVCGCLGHVKRECTSEAVVSAVSVGDQYGEWMRAGMMSGEGARRRYE---------GKGDEVKVSGDE-------------GRVQVEQ

Query:  EGVTGVPRVEQDSPLS--GGPTVGEVVHSSLDVEQEHDVHGPN--KDPKGKQKVDAFLTARELGIVDMEVSEPLASEGE
        EG++ V   E+ +  +   G   GEV+ +      +   +G    K+  G +K    +   + G ++  + + + ++GE
Subjt:  EGVTGVPRVEQDSPLS--GGPTVGEVVHSSLDVEQEHDVHGPN--KDPKGKQKVDAFLTARELGIVDMEVSEPLASEGE

XP_035551145.1 uncharacterized protein LOC118349709 [Juglans regia]1.1e-0632Show/hide
Query:  VPVLYERLPDFCYVCGCLGHVKRECTSEAVVSAVSVGDQYGEWMRAGMMSGEGARRRYEGKGDEVKVSGDEGRVQVEQEGVTGVPRVEQDSPLSGGPTVG
        +P+ YE+LP FC+ CGCL H K  C ++ V +     +QYG W+RA M  GE  +R  E         G  G +QVE + V  + + ++   L+GG T G
Subjt:  VPVLYERLPDFCYVCGCLGHVKRECTSEAVVSAVSVGDQYGEWMRAGMMSGEGARRRYEGKGDEVKVSGDEGRVQVEQEGVTGVPRVEQDSPLSGGPTVG

Query:  EVVHSSLDVEQEHDVHGPNKDPKGK
          +   L   +  ++     + +GK
Subjt:  EVVHSSLDVEQEHDVHGPNKDPKGK

XP_035551148.1 uncharacterized protein LOC118349711 [Juglans regia]8.4e-0732Show/hide
Query:  VPVLYERLPDFCYVCGCLGHVKRECTSEAVVSAVSVGDQYGEWMRAGMMSGEGARRRYEGKGDEVKVSGDEGRVQVEQEGVTGVPRVEQDSPLSGGPTVG
        +P+ YE+LP FC+ CGCL H K  C ++ V +     +QYG W+RA M  GE  +R  E         G  G +QVE + V  + + ++   L+GG T G
Subjt:  VPVLYERLPDFCYVCGCLGHVKRECTSEAVVSAVSVGDQYGEWMRAGMMSGEGARRRYEGKGDEVKVSGDEGRVQVEQEGVTGVPRVEQDSPLSGGPTVG

Query:  EVVHSSLDVEQEHDVHGPNKDPKGK
          +   L   +  ++     + +GK
Subjt:  EVVHSSLDVEQEHDVHGPNKDPKGK

TrEMBL top hitse value%identityAlignment
A0A2I4H947 uncharacterized protein LOC1090146265.3e-0727.93Show/hide
Query:  VPVLYERLPDFCYVCGCLGHVKRECTSEAVVSAVSVGDQYGEWMRAGMMSGEGARRRYE---------GKGDEVKVSGDE-------------GRVQVEQ
        +P+ YE LP FC+ CGCL H K  C +++V +     DQYG W+RA M  GE  +R  E         GKG  ++V GD+             G+  V +
Subjt:  VPVLYERLPDFCYVCGCLGHVKRECTSEAVVSAVSVGDQYGEWMRAGMMSGEGARRRYE---------GKGDEVKVSGDE-------------GRVQVEQ

Query:  EGVTGVPRVEQDSPLS--GGPTVGEVVHSSLDVEQEHDVHGPN--KDPKGKQKVDAFLTARELGIVDMEVSEPLASEGE
        EG++ V   E+ +  +   G   GEV+ +      +   +G    K+  G +K    +   + G ++  + + + ++GE
Subjt:  EGVTGVPRVEQDSPLS--GGPTVGEVVHSSLDVEQEHDVHGPN--KDPKGKQKVDAFLTARELGIVDMEVSEPLASEGE

A0A5C7GPP6 CCHC-type domain-containing protein5.8e-0631.4Show/hide
Query:  MVPVLYERLPDFCYVCGCLGHVKREC-TSEAVVSAV-SVGDQYGEWMR------AGMMSGEGARRRYEGKGDEVKVSGDEGRVQVEQEGVTGVPRVEQDS
        + P++YERLP FCY CG LGHV REC   EA + A+  V  Q+G W+R            +   ++  G GD   +S  +G  +   E   G+   +  +
Subjt:  MVPVLYERLPDFCYVCGCLGHVKREC-TSEAVVSAV-SVGDQYGEWMR------AGMMSGEGARRRYEGKGDEVKVSGDEGRVQVEQEGVTGVPRVEQDS

Query:  PLSGGPTVGEVVHSSLDVEQE
          + G +VG     S +V ++
Subjt:  PLSGGPTVGEVVHSSLDVEQE

A0A6J1D765 uncharacterized protein LOC1110179027.6e-0647.92Show/hide
Query:  PVLYERLPDFCYVCGCLGHVKRECTSEAVVSAVSVGDQYGEWMRAGMM
        P+ YE+LPDFCY CG +GH  REC   + V   +  +QYG+W+RA ++
Subjt:  PVLYERLPDFCYVCGCLGHVKRECTSEAVVSAVSVGDQYGEWMRAGMM

A0A6P9EQS3 uncharacterized protein LOC1183497095.3e-0732Show/hide
Query:  VPVLYERLPDFCYVCGCLGHVKRECTSEAVVSAVSVGDQYGEWMRAGMMSGEGARRRYEGKGDEVKVSGDEGRVQVEQEGVTGVPRVEQDSPLSGGPTVG
        +P+ YE+LP FC+ CGCL H K  C ++ V +     +QYG W+RA M  GE  +R  E         G  G +QVE + V  + + ++   L+GG T G
Subjt:  VPVLYERLPDFCYVCGCLGHVKRECTSEAVVSAVSVGDQYGEWMRAGMMSGEGARRRYEGKGDEVKVSGDEGRVQVEQEGVTGVPRVEQDSPLSGGPTVG

Query:  EVVHSSLDVEQEHDVHGPNKDPKGK
          +   L   +  ++     + +GK
Subjt:  EVVHSSLDVEQEHDVHGPNKDPKGK

A0A6P9F5H1 uncharacterized protein LOC1183497114.0e-0732Show/hide
Query:  VPVLYERLPDFCYVCGCLGHVKRECTSEAVVSAVSVGDQYGEWMRAGMMSGEGARRRYEGKGDEVKVSGDEGRVQVEQEGVTGVPRVEQDSPLSGGPTVG
        +P+ YE+LP FC+ CGCL H K  C ++ V +     +QYG W+RA M  GE  +R  E         G  G +QVE + V  + + ++   L+GG T G
Subjt:  VPVLYERLPDFCYVCGCLGHVKRECTSEAVVSAVSVGDQYGEWMRAGMMSGEGARRRYEGKGDEVKVSGDEGRVQVEQEGVTGVPRVEQDSPLSGGPTVG

Query:  EVVHSSLDVEQEHDVHGPNKDPKGK
          +   L   +  ++     + +GK
Subjt:  EVVHSSLDVEQEHDVHGPNKDPKGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCCGGTTCTCTATGAGCGCTTGCCTGACTTCTGTTATGTGTGTGGATGCTTGGGGCATGTCAAGAGGGAATGCACAAGTGAGGCAGTTGTGAGCGCGGTGAGTGT
GGGAGATCAGTATGGGGAGTGGATGCGAGCTGGGATGATGAGTGGAGAAGGGGCTCGGAGAAGGTATGAAGGCAAGGGGGATGAGGTTAAGGTTAGTGGGGATGAAGGGA
GGGTACAGGTGGAGCAGGAAGGGGTAACCGGTGTGCCTCGGGTTGAACAGGATAGCCCACTTAGTGGTGGCCCGACGGTAGGAGAGGTGGTTCATTCAAGTCTTGATGTG
GAGCAGGAACATGATGTGCACGGCCCGAATAAGGATCCGAAAGGTAAACAAAAGGTGGATGCCTTTCTGACCGCAAGAGAGCTGGGTATTGTGGATATGGAGGTATCAGA
GCCCTTAGCCTCTGAGGGGGAGAAGTTTCTGCAATGGGTCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCCGGTTCTCTATGAGCGCTTGCCTGACTTCTGTTATGTGTGTGGATGCTTGGGGCATGTCAAGAGGGAATGCACAAGTGAGGCAGTTGTGAGCGCGGTGAGTGT
GGGAGATCAGTATGGGGAGTGGATGCGAGCTGGGATGATGAGTGGAGAAGGGGCTCGGAGAAGGTATGAAGGCAAGGGGGATGAGGTTAAGGTTAGTGGGGATGAAGGGA
GGGTACAGGTGGAGCAGGAAGGGGTAACCGGTGTGCCTCGGGTTGAACAGGATAGCCCACTTAGTGGTGGCCCGACGGTAGGAGAGGTGGTTCATTCAAGTCTTGATGTG
GAGCAGGAACATGATGTGCACGGCCCGAATAAGGATCCGAAAGGTAAACAAAAGGTGGATGCCTTTCTGACCGCAAGAGAGCTGGGTATTGTGGATATGGAGGTATCAGA
GCCCTTAGCCTCTGAGGGGGAGAAGTTTCTGCAATGGGTCAAGTGA
Protein sequenceShow/hide protein sequence
MVPVLYERLPDFCYVCGCLGHVKRECTSEAVVSAVSVGDQYGEWMRAGMMSGEGARRRYEGKGDEVKVSGDEGRVQVEQEGVTGVPRVEQDSPLSGGPTVGEVVHSSLDV
EQEHDVHGPNKDPKGKQKVDAFLTARELGIVDMEVSEPLASEGEKFLQWVK