; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025526 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025526
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr10:14424896..14427462
RNA-Seq ExpressionLag0025526
SyntenyLag0025526
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015380691.1 uncharacterized protein LOC107174364 [Citrus sinensis]5.2e-2143.2Show/hide
Query:  GASLELCLVGKVISSKRVNVEVFRTVMKGAWRVHDETRIEAAGENTFGIQFRSQGEKKRVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCSFWVQICN
        G  L  CLVGKV+ ++ VN E F++ ++  WR   E +IE+ G N F  +F  + +KKRVL+ G W FDRALL+L EPK    L    F+  +FW+QI N
Subjt:  GASLELCLVGKVISSKRVNVEVFRTVMKGAWRVHDETRIEAAGENTFGIQFRSQGEKKRVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCSFWVQICN

Query:  VSTWWQTVQMARSLGGKMGTVEEVE
        V       ++ + LGG +G VEE+E
Subjt:  VSTWWQTVQMARSLGGKMGTVEEVE

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]6.3e-2745.52Show/hide
Query:  LSGASLELCLVGKVISSKRVNVEVFRTVMKGAWRVHDETRIEAAGENTFGIQFRSQGEKKRVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCSFWVQI
        L+  +++LC+V K+ +SKR++ E  R+VMK  WRVH+ TR E  G N + I F+S  EK RVLSSG W+F+++LL+L  P AT   + ++F+ C+FW+QI
Subjt:  LSGASLELCLVGKVISSKRVNVEVFRTVMKGAWRVHDETRIEAAGENTFGIQFRSQGEKKRVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCSFWVQI

Query:  CNVSTWWQTVQMARSLGGKMGTVEEVEGHGENDW
         N+     + +MA  LG K+G VEE+EG G + W
Subjt:  CNVSTWWQTVQMARSLGGKMGTVEEVEGHGENDW

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]1.8e-2144.35Show/hide
Query:  VGKVISSKRVNVEVFRTVMKGAWRVHDETRIEAAGENTFGIQFRSQGEKKRVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCSFWVQICNVSTWWQTV
        VGK+ +SKR++VE FR+VMK  W+VH+ T IE AG N + I F+S  EK RVL+SG WSF+ +LL+L  P AT     ++F+  + W+QI  +       
Subjt:  VGKVISSKRVNVEVFRTVMKGAWRVHDETRIEAAGENTFGIQFRSQGEKKRVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCSFWVQICNVSTWWQTV

Query:  QMARSLGGKMGTVEEVEGHGENDW
         MA+ LG ++G VEE++ +G  +W
Subjt:  QMARSLGGKMGTVEEVEGHGENDW

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]1.3e-2446.15Show/hide
Query:  SLELCLVGKVISSKRVNVEVFRTVMKGAWRVHDETRIEAAGENTFGIQFRSQGEKKRVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCSFWVQICNVS
        +++LC VGK+  SKR+ VE F +VMK  W++H+ TRIE AG N + I F++  EK RV S G W+FD++LLIL    A    + +D S C+FWVQI  ++
Subjt:  SLELCLVGKVISSKRVNVEVFRTVMKGAWRVHDETRIEAAGENTFGIQFRSQGEKKRVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCSFWVQICNVS

Query:  TWWQTVQMARSLGGKMGTVEEVEGHGENDW
            T  MA+ LG ++G VEEV+G    DW
Subjt:  TWWQTVQMARSLGGKMGTVEEVEGHGENDW

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]2.9e-2446.46Show/hide
Query:  LSGASLELCLVGKVISSKRVNVEVFRTVMKGAWRVHDETRIEAAGENTFGIQFRSQGEKKRVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCSFWVQI
        L+  +++LC VGK+ +SKR++ +   +VMK  W++H+ TRIEAAG N + I F++  EKKRVLSSG W+FD++L +L  P A    + VDF  C+FWVQI
Subjt:  LSGASLELCLVGKVISSKRVNVEVFRTVMKGAWRVHDETRIEAAGENTFGIQFRSQGEKKRVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCSFWVQI

Query:  CNVSTWWQTVQMARSLGGKMGTVEEVE
          +   + T  MA+ LG ++G VEEV+
Subjt:  CNVSTWWQTVQMARSLGGKMGTVEEVE

TrEMBL top hitse value%identityAlignment
A0A5C7HYU7 CCHC-type domain-containing protein4.7e-2040.62Show/hide
Query:  LELCLVGKVISSKRVNVEVFRTVMKGAWRVHDETRIEAAGENTFGIQFRSQGEKKRVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCSFWVQICNVST
        L LCLVGKV++++ +N EVFR V+   W+V +   IE   EN F   F++Q +++RVL+ G WSFD  L++L  P     ++ + F+  +FWVQI NVS 
Subjt:  LELCLVGKVISSKRVNVEVFRTVMKGAWRVHDETRIEAAGENTFGIQFRSQGEKKRVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCSFWVQICNVST

Query:  WWQTVQMARSLGGKMGTVEEVEGHGEND
           T Q+   LG  +G VEE++     D
Subjt:  WWQTVQMARSLGGKMGTVEEVEGHGEND

A0A6J1D765 uncharacterized protein LOC1110179023.1e-2745.52Show/hide
Query:  LSGASLELCLVGKVISSKRVNVEVFRTVMKGAWRVHDETRIEAAGENTFGIQFRSQGEKKRVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCSFWVQI
        L+  +++LC+V K+ +SKR++ E  R+VMK  WRVH+ TR E  G N + I F+S  EK RVLSSG W+F+++LL+L  P AT   + ++F+ C+FW+QI
Subjt:  LSGASLELCLVGKVISSKRVNVEVFRTVMKGAWRVHDETRIEAAGENTFGIQFRSQGEKKRVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCSFWVQI

Query:  CNVSTWWQTVQMARSLGGKMGTVEEVEGHGENDW
         N+     + +MA  LG K+G VEE+EG G + W
Subjt:  CNVSTWWQTVQMARSLGGKMGTVEEVEGHGENDW

A0A6J1DP89 uncharacterized protein LOC1110229328.6e-2244.35Show/hide
Query:  VGKVISSKRVNVEVFRTVMKGAWRVHDETRIEAAGENTFGIQFRSQGEKKRVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCSFWVQICNVSTWWQTV
        VGK+ +SKR++VE FR+VMK  W+VH+ T IE AG N + I F+S  EK RVL+SG WSF+ +LL+L  P AT     ++F+  + W+QI  +       
Subjt:  VGKVISSKRVNVEVFRTVMKGAWRVHDETRIEAAGENTFGIQFRSQGEKKRVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCSFWVQICNVSTWWQTV

Query:  QMARSLGGKMGTVEEVEGHGENDW
         MA+ LG ++G VEE++ +G  +W
Subjt:  QMARSLGGKMGTVEEVEGHGENDW

A0A6J1DVS4 uncharacterized protein LOC1110235556.4e-2546.15Show/hide
Query:  SLELCLVGKVISSKRVNVEVFRTVMKGAWRVHDETRIEAAGENTFGIQFRSQGEKKRVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCSFWVQICNVS
        +++LC VGK+  SKR+ VE F +VMK  W++H+ TRIE AG N + I F++  EK RV S G W+FD++LLIL    A    + +D S C+FWVQI  ++
Subjt:  SLELCLVGKVISSKRVNVEVFRTVMKGAWRVHDETRIEAAGENTFGIQFRSQGEKKRVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCSFWVQICNVS

Query:  TWWQTVQMARSLGGKMGTVEEVEGHGENDW
            T  MA+ LG ++G VEEV+G    DW
Subjt:  TWWQTVQMARSLGGKMGTVEEVEGHGENDW

A0A6J1DYG3 uncharacterized protein LOC1110246761.4e-2446.46Show/hide
Query:  LSGASLELCLVGKVISSKRVNVEVFRTVMKGAWRVHDETRIEAAGENTFGIQFRSQGEKKRVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCSFWVQI
        L+  +++LC VGK+ +SKR++ +   +VMK  W++H+ TRIEAAG N + I F++  EKKRVLSSG W+FD++L +L  P A    + VDF  C+FWVQI
Subjt:  LSGASLELCLVGKVISSKRVNVEVFRTVMKGAWRVHDETRIEAAGENTFGIQFRSQGEKKRVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCSFWVQI

Query:  CNVSTWWQTVQMARSLGGKMGTVEEVE
          +   + T  MA+ LG ++G VEEV+
Subjt:  CNVSTWWQTVQMARSLGGKMGTVEEVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTCCTCACCCATGCTTACTTTTGTTGTCGTGTGGCCATCGAGCACCACCACCGCATCGGTCGGTTGCCGACGATTGGAGCTCTCTTAGTCGATCATCTGACCGA
AAGGTGGCAGCAGCTAAAGGTTGCTCGTCAGTTACCAGAAGCTAACGGTCGATGGTCAGTCATAGTGTATCGGCGGCGTGGGTGTGGGAGGTCTGTCGAGGGGATCTACG
AGAGAGGTCGAAGTGTGCTTTGCGGCGACAAGTATCGGGCGAAATCTGGACTGGTTGTTCGGTTAGGGCTCGAGGCACGTTTGTCTGGCGAGGGTTTTCTTTTTCCGGTA
ACAAGGCTTCGACAAGGTATTGTTTTCGGTGGAGTGTTAGGTCCCTGTTTTGGCGGTGGGTTTGTGGCATTGGGGAGTTACGTGGAGCGTGAGGCCGCAGATCACAGTAG
GAGGGTTACACGGTGTAGGTGTTCATACGAGTGGTACGACAAGGTTATTAAGCCGAATGAGATGGCGGCGCCGTTGTCCGGGGCGTCGTTGGAATTATGCCTGGTGGGCA
AGGTGATATCGTCTAAAAGGGTGAACGTGGAGGTCTTCAGAACAGTCATGAAAGGTGCCTGGAGGGTTCACGATGAGACCCGAATCGAGGCTGCGGGTGAGAATACATTT
GGGATACAGTTCCGGTCGCAAGGGGAGAAGAAGCGGGTGTTATCATCTGGGTCGTGGTCGTTTGATAGGGCTCTATTGATACTGAAGGAGCCAAAGGCAACAGTGGGGTT
GGTAGGTGTTGACTTCAGTGATTGTTCGTTCTGGGTTCAGATATGTAACGTGTCGACGTGGTGGCAGACTGTGCAGATGGCGAGATCGCTGGGGGGAAAGATGGGCACCG
TGGAGGAGGTTGAGGGGCATGGGGAAAATGATTGGCGGGTCCAGTGCTCCGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTCCTCACCCATGCTTACTTTTGTTGTCGTGTGGCCATCGAGCACCACCACCGCATCGGTCGGTTGCCGACGATTGGAGCTCTCTTAGTCGATCATCTGACCGA
AAGGTGGCAGCAGCTAAAGGTTGCTCGTCAGTTACCAGAAGCTAACGGTCGATGGTCAGTCATAGTGTATCGGCGGCGTGGGTGTGGGAGGTCTGTCGAGGGGATCTACG
AGAGAGGTCGAAGTGTGCTTTGCGGCGACAAGTATCGGGCGAAATCTGGACTGGTTGTTCGGTTAGGGCTCGAGGCACGTTTGTCTGGCGAGGGTTTTCTTTTTCCGGTA
ACAAGGCTTCGACAAGGTATTGTTTTCGGTGGAGTGTTAGGTCCCTGTTTTGGCGGTGGGTTTGTGGCATTGGGGAGTTACGTGGAGCGTGAGGCCGCAGATCACAGTAG
GAGGGTTACACGGTGTAGGTGTTCATACGAGTGGTACGACAAGGTTATTAAGCCGAATGAGATGGCGGCGCCGTTGTCCGGGGCGTCGTTGGAATTATGCCTGGTGGGCA
AGGTGATATCGTCTAAAAGGGTGAACGTGGAGGTCTTCAGAACAGTCATGAAAGGTGCCTGGAGGGTTCACGATGAGACCCGAATCGAGGCTGCGGGTGAGAATACATTT
GGGATACAGTTCCGGTCGCAAGGGGAGAAGAAGCGGGTGTTATCATCTGGGTCGTGGTCGTTTGATAGGGCTCTATTGATACTGAAGGAGCCAAAGGCAACAGTGGGGTT
GGTAGGTGTTGACTTCAGTGATTGTTCGTTCTGGGTTCAGATATGTAACGTGTCGACGTGGTGGCAGACTGTGCAGATGGCGAGATCGCTGGGGGGAAAGATGGGCACCG
TGGAGGAGGTTGAGGGGCATGGGGAAAATGATTGGCGGGTCCAGTGCTCCGAATAA
Protein sequenceShow/hide protein sequence
MALLTHAYFCCRVAIEHHHRIGRLPTIGALLVDHLTERWQQLKVARQLPEANGRWSVIVYRRRGCGRSVEGIYERGRSVLCGDKYRAKSGLVVRLGLEARLSGEGFLFPV
TRLRQGIVFGGVLGPCFGGGFVALGSYVEREAADHSRRVTRCRCSYEWYDKVIKPNEMAAPLSGASLELCLVGKVISSKRVNVEVFRTVMKGAWRVHDETRIEAAGENTF
GIQFRSQGEKKRVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCSFWVQICNVSTWWQTVQMARSLGGKMGTVEEVEGHGENDWRVQCSE