; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025544 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025544
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed DNA polymerase
Genome locationchr10:14866062..14866370
RNA-Seq ExpressionLag0025544
SyntenyLag0025544
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON44674.1 Aspartic peptidase domain containing protein [Trema orientale]5.5e-2067.09Show/hide
Query:  GIVEDVLVKVNKFIFPVDFVVLDMQEDREVPIILGRPFLATGKAEINVYMGKLTLSVDDENVVFSIFGHDEFVCCIHTC
        G +EDVLVKV+KFIFPVDFVVLDM+EDRE+PIILGRPFL TGKA I+V+ GKLTL V+DE V F+++   +F   +H+C
Subjt:  GIVEDVLVKVNKFIFPVDFVVLDMQEDREVPIILGRPFLATGKAEINVYMGKLTLSVDDENVVFSIFGHDEFVCCIHTC

WP_217833150.1 reverse transcriptase family protein [Synechococcus sp. PCC 7002]2.4e-2072.15Show/hide
Query:  GIVEDVLVKVNKFIFPVDFVVLDMQEDREVPIILGRPFLATGKAEINVYMGKLTLSVDDENVVFSIF----GHDEFVCC
        GIVEDVLVKV+KFIFP DFVVLDM++D E+PIILGRPFLATGKA I+V  GKLTL V+DENVVF I+     HDE   C
Subjt:  GIVEDVLVKVNKFIFPVDFVVLDMQEDREVPIILGRPFLATGKAEINVYMGKLTLSVDDENVVFSIF----GHDEFVCC

XP_023886158.1 uncharacterized protein LOC111998292 [Quercus suber]2.7e-1957.32Show/hide
Query:  GIVEDVLVKVNKFIFPVDFVVLDMQEDREVPIILGRPFLATGKAEINVYMGKLTLSVDDENVVFSIFGHDEFVCCIHTCFSV
        G++E+VLVKV+KFIFP DF+VLDM ED E+P+ILGRPFLATG+  I+V  GKL L V+++ V F++F   EF    H+CF +
Subjt:  GIVEDVLVKVNKFIFPVDFVVLDMQEDREVPIILGRPFLATGKAEINVYMGKLTLSVDDENVVFSIFGHDEFVCCIHTCFSV

XP_031270008.1 uncharacterized protein LOC116128425 [Pistacia vera]2.7e-1960Show/hide
Query:  GIVEDVLVKVNKFIFPVDFVVLDMQEDREVPIILGRPFLATGKAEINVYMGKLTLSVDDENVVFSIFGHDEFVCCIH-TCFSVGL
        G+VEDVL+KV+K IFPVDF+VLDM+EDREVP+ILGRPFLATGK  I+V+ GKL L V+DE V F++F   ++      TCF + +
Subjt:  GIVEDVLVKVNKFIFPVDFVVLDMQEDREVPIILGRPFLATGKAEINVYMGKLTLSVDDENVVFSIFGHDEFVCCIH-TCFSVGL

XP_042059456.1 uncharacterized protein LOC121803953 [Salvia splendens]2.1e-1970.67Show/hide
Query:  GIVEDVLVKVNKFIFPVDFVVLDMQEDREVPIILGRPFLATGKAEINVYMGKLTLSVDDENVVFSIFG----HDE
        GIVED+LVKVN FIFPVDFVVLDM+EDR VP+ILGRPFLATGKA I+V  G+LTL ++DE+V FSI+     HD+
Subjt:  GIVEDVLVKVNKFIFPVDFVVLDMQEDREVPIILGRPFLATGKAEINVYMGKLTLSVDDENVVFSIFG----HDE

TrEMBL top hitse value%identityAlignment
A0A2G9GD00 DNA-directed DNA polymerase6.5e-1957.65Show/hide
Query:  GIVEDVLVKVNKFIFPVDFVVLDMQEDREVPIILGRPFLATGKAEINVYMGKLTLSVDDENVVFSIFGHDEFVCCIHTCFSVGLY
        G++ED+LVKVNKFIFP DF+VLDM+ D E+PIILGRPFLATG+  IN   G+LT+ V D+ + F+IF   +F      CFSV L+
Subjt:  GIVEDVLVKVNKFIFPVDFVVLDMQEDREVPIILGRPFLATGKAEINVYMGKLTLSVDDENVVFSIFGHDEFVCCIHTCFSVGLY

A0A2G9GQZ7 Reverse transcriptase3.8e-1955.29Show/hide
Query:  GIVEDVLVKVNKFIFPVDFVVLDMQEDREVPIILGRPFLATGKAEINVYMGKLTLSVDDENVVFSIFGHDEFVCCIHTCFSVGLY
        G++ED+LVKV+KFIFP +F+VLDM+ DRE+PIILGRPFLATG+  I+V  G+LT+ V D+ + F++F   +F    H CF+V L+
Subjt:  GIVEDVLVKVNKFIFPVDFVVLDMQEDREVPIILGRPFLATGKAEINVYMGKLTLSVDDENVVFSIFGHDEFVCCIHTCFSVGLY

A0A2P5A486 Uncharacterized protein (Fragment)8.5e-1964.94Show/hide
Query:  VEDVLVKVNKFIFPVDFVVLDMQEDREVPIILGRPFLATGKAEINVYMGKLTLSVDDENVVFSIFGHDEFVCCIHTC
        +EDVLVKV+KFI+PVDFVVLDM++DRE+PIILGRPFLATG A I+V+ GKLTL V+DE V F+++   +F   +H+C
Subjt:  VEDVLVKVNKFIFPVDFVVLDMQEDREVPIILGRPFLATGKAEINVYMGKLTLSVDDENVVFSIFGHDEFVCCIHTC

A0A2P5B7A0 Aspartic peptidase domain containing protein2.6e-2067.09Show/hide
Query:  GIVEDVLVKVNKFIFPVDFVVLDMQEDREVPIILGRPFLATGKAEINVYMGKLTLSVDDENVVFSIFGHDEFVCCIHTC
        G +EDVLVKV+KFIFPVDFVVLDM+EDRE+PIILGRPFL TGKA I+V+ GKLTL V+DE V F+++   +F   +H+C
Subjt:  GIVEDVLVKVNKFIFPVDFVVLDMQEDREVPIILGRPFLATGKAEINVYMGKLTLSVDDENVVFSIFGHDEFVCCIHTC

A5AZ88 Integrase catalytic domain-containing protein2.9e-1955.95Show/hide
Query:  GIVEDVLVKVNKFIFPVDFVVLDMQEDREVPIILGRPFLATGKAEINVYMGKLTLSVDDENVVFSIFGHDEFVCCIHTCFSVGL
        GI+EDVLVKV+KF+FP+DF+VLDM+EDR+VP+ILGRPFLAT +  I+ + GKL L V DE V F++F   +F   +  CF++ +
Subjt:  GIVEDVLVKVNKFIFPVDFVVLDMQEDREVPIILGRPFLATGKAEINVYMGKLTLSVDDENVVFSIFGHDEFVCCIHTCFSVGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCGTGGAGGACGTGTTAGTGAAGGTAAATAAGTTCATTTTTCCTGTAGACTTCGTAGTGCTGGACATGCAGGAGGATAGAGAAGTGCCTATCATTCTTGGTAG
ACCATTTCTAGCCACTGGTAAGGCTGAAATTAATGTTTATATGGGTAAGTTGACTCTTAGTGTAGATGATGAAAATGTAGTTTTCAGTATCTTTGGCCATGATGAGTTTG
TTTGTTGTATACATACTTGCTTTTCTGTTGGCCTATATTTTCTACCTGATGAGGATGATGAAGAAGAGTTAAACTTAGGCCTAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCGTGGAGGACGTGTTAGTGAAGGTAAATAAGTTCATTTTTCCTGTAGACTTCGTAGTGCTGGACATGCAGGAGGATAGAGAAGTGCCTATCATTCTTGGTAG
ACCATTTCTAGCCACTGGTAAGGCTGAAATTAATGTTTATATGGGTAAGTTGACTCTTAGTGTAGATGATGAAAATGTAGTTTTCAGTATCTTTGGCCATGATGAGTTTG
TTTGTTGTATACATACTTGCTTTTCTGTTGGCCTATATTTTCTACCTGATGAGGATGATGAAGAAGAGTTAAACTTAGGCCTAGAGTGA
Protein sequenceShow/hide protein sequence
MGIVEDVLVKVNKFIFPVDFVVLDMQEDREVPIILGRPFLATGKAEINVYMGKLTLSVDDENVVFSIFGHDEFVCCIHTCFSVGLYFLPDEDDEEELNLGLE