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Lag0025563 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025563
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr10:15315664..15316436
RNA-Seq ExpressionLag0025563
SyntenyLag0025563
Gene Ontology termsGO:0048507 - meristem development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034014.1 uncharacterized protein E6C27_scaffold400G00820 [Cucumis melo var. makuwa]7.4e-3842.11Show/hide
Query:  MVGMSLGIYVRVNQLEIVYRHPEVTISGSVRRV--------DMDSQ------------------------NLGEDPSQCVDLSQCLDLESELMVSP--HD
        MVG+SLG+ +  +Q+EI+YRHP +T SG+VR +        +M++                         NL  +P     + + +D+E E    P  H+
Subjt:  MVGMSLGIYVRVNQLEIVYRHPEVTISGSVRRV--------DMDSQ------------------------NLGEDPSQCVDLSQCLDLESELMVSP--HD

Query:  GEDVVVDNTFKEPRTETDDEFENLDFDGREHIIPLETFNQLDMDVIDSVGKHDPIVAPVVIENNLLYKGLICQDKEILQHLTKCFVVKCHAPYEVVESTP
         E++V  N + E RTETDDEFE +DFDG E+ +P  TF  LDM+ +D++ +HDPI+ P+V +N  LY G+IC++KE++QH+ KCF +K HAPYEVVESTP
Subjt:  GEDVVVDNTFKEPRTETDDEFENLDFDGREHIIPLETFNQLDMDVIDSVGKHDPIVAPVVIENNLLYKGLICQDKEILQHLTKCFVVKCHAPYEVVESTP

Query:  SIWTVRCKK
        + W +RCKK
Subjt:  SIWTVRCKK

KAA0036768.1 uncharacterized protein E6C27_scaffold20G00510 [Cucumis melo var. makuwa]6.3e-3742.44Show/hide
Query:  MVGMSLGIYVRVNQLEIVYRHPEVTISGSVRRVDMDSQNLGEDPS------------------QCVDLSQCLDLESELM-----VSPHDG-------EDV
        MVG+SLG+ +  +Q+EI+YRHP +T SG+VR +     N  E  +                    VD +  L++E   +     V P          E++
Subjt:  MVGMSLGIYVRVNQLEIVYRHPEVTISGSVRRVDMDSQNLGEDPS------------------QCVDLSQCLDLESELM-----VSPHDG-------EDV

Query:  VVDNTFKEPRTETDDEFENLDFDGREHIIPLETFNQLDMDVIDSVGKHDPIVAPVVIENNLLYKGLICQDKEILQHLTKCFVVKCHAPYEVVESTPSIWT
        V  N + E RTETDDEFE +DFDG E+ +P  TF  LDM+ +D + +HDPI+ P+V +N  LY G+IC++K++LQH+ KCF +K HAPYEVVESTP+ W 
Subjt:  VVDNTFKEPRTETDDEFENLDFDGREHIIPLETFNQLDMDVIDSVGKHDPIVAPVVIENNLLYKGLICQDKEILQHLTKCFVVKCHAPYEVVESTPSIWT

Query:  VRCKK
        +RCKK
Subjt:  VRCKK

KAA0040476.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]7.0e-3641.63Show/hide
Query:  MVGMSLGIYVRVNQLEIVYRHPEVTISGSVR--------RVDMDSQ------------------------NLGEDPSQCVDLSQCLDLESELMVSP--HD
        MVG+SLG+ +  +Q+EI+YRH  +T SG+VR          +M++                         NL  +P     + + +D+E E    P  H+
Subjt:  MVGMSLGIYVRVNQLEIVYRHPEVTISGSVR--------RVDMDSQ------------------------NLGEDPSQCVDLSQCLDLESELMVSP--HD

Query:  GEDVVVDNTFKEPRTETDDEFENLDFDGREHIIPLETFNQLDMDVIDSVGKHDPIVAPVVIENNLLYKGLICQDKEILQHLTKCFVVKCHAPYEVVESTP
         E++V  N + E RTETDDEFE +DFDG E+ +P   F  LDM+ +D + +HDPI+ P+V +N  LY G+IC++KE+LQH+ KCF +K HAPYEVVESTP
Subjt:  GEDVVVDNTFKEPRTETDDEFENLDFDGREHIIPLETFNQLDMDVIDSVGKHDPIVAPVVIENNLLYKGLICQDKEILQHLTKCFVVKCHAPYEVVESTP

Query:  SIWTVRCKK
        + W +RCKK
Subjt:  SIWTVRCKK

KAA0041167.1 uncharacterized protein E6C27_scaffold128G00980 [Cucumis melo var. makuwa]4.6e-4846.78Show/hide
Query:  MEDECLAFVLHTNGTMIDGVNGIDYDQPACGGFNVNVNSEIVFNQFIEMVGMSLGIYVRVNQLEIVYRHPEVTISGSVR---------------------
        M D+ L F+L  NG MIDG +GIDYDQPACGGF ++VNS IVF QFIE+VG S+GI +R++ +EI+YRHP++T SG +R                     
Subjt:  MEDECLAFVLHTNGTMIDGVNGIDYDQPACGGFNVNVNSEIVFNQFIEMVGMSLGIYVRVNQLEIVYRHPEVTISGSVR---------------------

Query:  ------------RVDMDSQNLGEDPSQCVDLSQCLDLESELMVS-PHDGEDVVVDNTFKEPRTETD---DEFENLDFDGREHIIPLETFNQLDMDVIDSV
                    RV +D     +   Q  D +Q +  +SEL+ S  +D E+++ +N   + RTE D   DEFE  DFDGREH +P  T  Q+DMDVIDS+
Subjt:  ------------RVDMDSQNLGEDPSQCVDLSQCLDLESELMVS-PHDGEDVVVDNTFKEPRTETD---DEFENLDFDGREHIIPLETFNQLDMDVIDSV

Query:  GKHDPIVAPVVIENNLLYKGLICQDKEILQHLT
         +HDPIVAP+V++N+ LYKG+ICQDKE LQH++
Subjt:  GKHDPIVAPVVIENNLLYKGLICQDKEILQHLT

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]4.8e-3742.11Show/hide
Query:  MVGMSLGIYVRVNQLEIVYRHPEVTISGSVR--------RVDMDSQ------------------------NLGEDPSQCVDLSQCLDLESELMVSP--HD
        MVG+SLG+ +  +Q+EI+YRHP +T SG+VR          +M++                         NL  +P     + + +D+E E    P  H+
Subjt:  MVGMSLGIYVRVNQLEIVYRHPEVTISGSVR--------RVDMDSQ------------------------NLGEDPSQCVDLSQCLDLESELMVSP--HD

Query:  GEDVVVDNTFKEPRTETDDEFENLDFDGREHIIPLETFNQLDMDVIDSVGKHDPIVAPVVIENNLLYKGLICQDKEILQHLTKCFVVKCHAPYEVVESTP
         E++V  N + E RTETDDEFE +DFDG E+ +P  TF  LDM+ +D + +HDPI+ P+V +N  LY G+IC++K++LQH+ KCF +K HAPYEVVESTP
Subjt:  GEDVVVDNTFKEPRTETDDEFENLDFDGREHIIPLETFNQLDMDVIDSVGKHDPIVAPVVIENNLLYKGLICQDKEILQHLTKCFVVKCHAPYEVVESTP

Query:  SIWTVRCKK
        + W +RCKK
Subjt:  SIWTVRCKK

TrEMBL top hitse value%identityAlignment
A0A5A7SS31 DBD_Tnp_Mut domain-containing protein3.6e-3842.11Show/hide
Query:  MVGMSLGIYVRVNQLEIVYRHPEVTISGSVRRV--------DMDSQ------------------------NLGEDPSQCVDLSQCLDLESELMVSP--HD
        MVG+SLG+ +  +Q+EI+YRHP +T SG+VR +        +M++                         NL  +P     + + +D+E E    P  H+
Subjt:  MVGMSLGIYVRVNQLEIVYRHPEVTISGSVRRV--------DMDSQ------------------------NLGEDPSQCVDLSQCLDLESELMVSP--HD

Query:  GEDVVVDNTFKEPRTETDDEFENLDFDGREHIIPLETFNQLDMDVIDSVGKHDPIVAPVVIENNLLYKGLICQDKEILQHLTKCFVVKCHAPYEVVESTP
         E++V  N + E RTETDDEFE +DFDG E+ +P  TF  LDM+ +D++ +HDPI+ P+V +N  LY G+IC++KE++QH+ KCF +K HAPYEVVESTP
Subjt:  GEDVVVDNTFKEPRTETDDEFENLDFDGREHIIPLETFNQLDMDVIDSVGKHDPIVAPVVIENNLLYKGLICQDKEILQHLTKCFVVKCHAPYEVVESTP

Query:  SIWTVRCKK
        + W +RCKK
Subjt:  SIWTVRCKK

A0A5A7T1X8 SWIM-type domain-containing protein3.0e-3742.44Show/hide
Query:  MVGMSLGIYVRVNQLEIVYRHPEVTISGSVRRVDMDSQNLGEDPS------------------QCVDLSQCLDLESELM-----VSPHDG-------EDV
        MVG+SLG+ +  +Q+EI+YRHP +T SG+VR +     N  E  +                    VD +  L++E   +     V P          E++
Subjt:  MVGMSLGIYVRVNQLEIVYRHPEVTISGSVRRVDMDSQNLGEDPS------------------QCVDLSQCLDLESELM-----VSPHDG-------EDV

Query:  VVDNTFKEPRTETDDEFENLDFDGREHIIPLETFNQLDMDVIDSVGKHDPIVAPVVIENNLLYKGLICQDKEILQHLTKCFVVKCHAPYEVVESTPSIWT
        V  N + E RTETDDEFE +DFDG E+ +P  TF  LDM+ +D + +HDPI+ P+V +N  LY G+IC++K++LQH+ KCF +K HAPYEVVESTP+ W 
Subjt:  VVDNTFKEPRTETDDEFENLDFDGREHIIPLETFNQLDMDVIDSVGKHDPIVAPVVIENNLLYKGLICQDKEILQHLTKCFVVKCHAPYEVVESTPSIWT

Query:  VRCKK
        +RCKK
Subjt:  VRCKK

A0A5A7THR5 Uncharacterized protein2.2e-4846.78Show/hide
Query:  MEDECLAFVLHTNGTMIDGVNGIDYDQPACGGFNVNVNSEIVFNQFIEMVGMSLGIYVRVNQLEIVYRHPEVTISGSVR---------------------
        M D+ L F+L  NG MIDG +GIDYDQPACGGF ++VNS IVF QFIE+VG S+GI +R++ +EI+YRHP++T SG +R                     
Subjt:  MEDECLAFVLHTNGTMIDGVNGIDYDQPACGGFNVNVNSEIVFNQFIEMVGMSLGIYVRVNQLEIVYRHPEVTISGSVR---------------------

Query:  ------------RVDMDSQNLGEDPSQCVDLSQCLDLESELMVS-PHDGEDVVVDNTFKEPRTETD---DEFENLDFDGREHIIPLETFNQLDMDVIDSV
                    RV +D     +   Q  D +Q +  +SEL+ S  +D E+++ +N   + RTE D   DEFE  DFDGREH +P  T  Q+DMDVIDS+
Subjt:  ------------RVDMDSQNLGEDPSQCVDLSQCLDLESELMVS-PHDGEDVVVDNTFKEPRTETD---DEFENLDFDGREHIIPLETFNQLDMDVIDSV

Query:  GKHDPIVAPVVIENNLLYKGLICQDKEILQHLT
         +HDPIVAP+V++N+ LYKG+ICQDKE LQH++
Subjt:  GKHDPIVAPVVIENNLLYKGLICQDKEILQHLT

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein2.3e-3742.11Show/hide
Query:  MVGMSLGIYVRVNQLEIVYRHPEVTISGSVR--------RVDMDSQ------------------------NLGEDPSQCVDLSQCLDLESELMVSP--HD
        MVG+SLG+ +  +Q+EI+YRHP +T SG+VR          +M++                         NL  +P     + + +D+E E    P  H+
Subjt:  MVGMSLGIYVRVNQLEIVYRHPEVTISGSVR--------RVDMDSQ------------------------NLGEDPSQCVDLSQCLDLESELMVSP--HD

Query:  GEDVVVDNTFKEPRTETDDEFENLDFDGREHIIPLETFNQLDMDVIDSVGKHDPIVAPVVIENNLLYKGLICQDKEILQHLTKCFVVKCHAPYEVVESTP
         E++V  N + E RTETDDEFE +DFDG E+ +P  TF  LDM+ +D + +HDPI+ P+V +N  LY G+IC++K++LQH+ KCF +K HAPYEVVESTP
Subjt:  GEDVVVDNTFKEPRTETDDEFENLDFDGREHIIPLETFNQLDMDVIDSVGKHDPIVAPVVIENNLLYKGLICQDKEILQHLTKCFVVKCHAPYEVVESTP

Query:  SIWTVRCKK
        + W +RCKK
Subjt:  SIWTVRCKK

A0A5D3DIM2 Serine/threonine-protein phosphatase 7 long form-like protein3.4e-3641.63Show/hide
Query:  MVGMSLGIYVRVNQLEIVYRHPEVTISGSVR--------RVDMDSQ------------------------NLGEDPSQCVDLSQCLDLESELMVSP--HD
        MVG+SLG+ +  +Q+EI+YRH  +T SG+VR          +M++                         NL  +P     + + +D+E E    P  H+
Subjt:  MVGMSLGIYVRVNQLEIVYRHPEVTISGSVR--------RVDMDSQ------------------------NLGEDPSQCVDLSQCLDLESELMVSP--HD

Query:  GEDVVVDNTFKEPRTETDDEFENLDFDGREHIIPLETFNQLDMDVIDSVGKHDPIVAPVVIENNLLYKGLICQDKEILQHLTKCFVVKCHAPYEVVESTP
         E++V  N + E RTETDDEFE +DFDG E+ +P   F  LDM+ +D + +HDPI+ P+V +N  LY G+IC++KE+LQH+ KCF +K HAPYEVVESTP
Subjt:  GEDVVVDNTFKEPRTETDDEFENLDFDGREHIIPLETFNQLDMDVIDSVGKHDPIVAPVVIENNLLYKGLICQDKEILQHLTKCFVVKCHAPYEVVESTP

Query:  SIWTVRCKK
        + W +RCKK
Subjt:  SIWTVRCKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATGAGTGTCTGGCATTTGTTCTGCATACAAATGGTACCATGATTGATGGTGTTAATGGGATTGATTATGACCAACCCGCCTGTGGAGGTTTTAATGTGAATGT
GAATAGTGAGATTGTGTTTAACCAGTTTATTGAAATGGTAGGGATGTCTCTTGGTATATATGTAAGGGTCAATCAGTTAGAGATAGTGTATAGACACCCTGAGGTAACAA
TATCAGGATCTGTAAGGAGGGTGGACATGGATTCACAAAATTTAGGAGAAGACCCTAGCCAATGTGTTGACCTGAGTCAATGTCTTGATCTTGAGTCTGAATTAATGGTG
TCTCCACATGATGGTGAGGATGTGGTGGTAGATAATACTTTTAAAGAGCCAAGGACAGAGACAGATGATGAATTTGAAAATTTAGACTTCGATGGTCGTGAACATATTAT
CCCATTAGAAACATTCAATCAATTGGATATGGATGTCATAGATAGTGTTGGAAAACATGATCCCATTGTTGCTCCTGTGGTCATTGAAAATAATTTATTATATAAGGGGT
TGATATGCCAAGACAAAGAAATTCTTCAACATTTGACAAAGTGTTTTGTTGTTAAGTGTCATGCACCGTACGAAGTAGTGGAGTCAACCCCATCCATATGGACAGTACGA
TGTAAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATGAGTGTCTGGCATTTGTTCTGCATACAAATGGTACCATGATTGATGGTGTTAATGGGATTGATTATGACCAACCCGCCTGTGGAGGTTTTAATGTGAATGT
GAATAGTGAGATTGTGTTTAACCAGTTTATTGAAATGGTAGGGATGTCTCTTGGTATATATGTAAGGGTCAATCAGTTAGAGATAGTGTATAGACACCCTGAGGTAACAA
TATCAGGATCTGTAAGGAGGGTGGACATGGATTCACAAAATTTAGGAGAAGACCCTAGCCAATGTGTTGACCTGAGTCAATGTCTTGATCTTGAGTCTGAATTAATGGTG
TCTCCACATGATGGTGAGGATGTGGTGGTAGATAATACTTTTAAAGAGCCAAGGACAGAGACAGATGATGAATTTGAAAATTTAGACTTCGATGGTCGTGAACATATTAT
CCCATTAGAAACATTCAATCAATTGGATATGGATGTCATAGATAGTGTTGGAAAACATGATCCCATTGTTGCTCCTGTGGTCATTGAAAATAATTTATTATATAAGGGGT
TGATATGCCAAGACAAAGAAATTCTTCAACATTTGACAAAGTGTTTTGTTGTTAAGTGTCATGCACCGTACGAAGTAGTGGAGTCAACCCCATCCATATGGACAGTACGA
TGTAAAAAGTGA
Protein sequenceShow/hide protein sequence
MEDECLAFVLHTNGTMIDGVNGIDYDQPACGGFNVNVNSEIVFNQFIEMVGMSLGIYVRVNQLEIVYRHPEVTISGSVRRVDMDSQNLGEDPSQCVDLSQCLDLESELMV
SPHDGEDVVVDNTFKEPRTETDDEFENLDFDGREHIIPLETFNQLDMDVIDSVGKHDPIVAPVVIENNLLYKGLICQDKEILQHLTKCFVVKCHAPYEVVESTPSIWTVR
CKK