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Lag0025576 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025576
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr10:15561869..15562192
RNA-Seq ExpressionLag0025576
SyntenyLag0025576
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]7.0e-1861.05Show/hide
Query:  LSVSTSKKNRPSTSTFDRLKVTSDQPKRKKDNLKEKLFDEVNKDKKLHSIVSSRMKRKFSVLINTKGSLGVKSNFTIFTNPKSEGLDQDYDEDEN
        LS+STSKK+RPSTS FDRLK+T+DQ +R+  +LK K F E N D K+HS V SRMKRK SV INT+GSL VK  F IFTNP +EG ++  DE+++
Subjt:  LSVSTSKKNRPSTSTFDRLKVTSDQPKRKKDNLKEKLFDEVNKDKKLHSIVSSRMKRKFSVLINTKGSLGVKSNFTIFTNPKSEGLDQDYDEDEN

KAA0055462.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.4e-1861.05Show/hide
Query:  LSVSTSKKNRPSTSTFDRLKVTSDQPKRKKDNLKEKLFDEVNKDKKLHSIVSSRMKRKFSVLINTKGSLGVKSNFTIFTNPKSEGLDQDYDEDEN
        LS+STSKK+RPSTSTFDRLK+T+DQ +R+  +LK K F E N D K+H+ V SRMKRK SV INT+GSL VK  F IFTNP +EG ++ +DE+++
Subjt:  LSVSTSKKNRPSTSTFDRLKVTSDQPKRKKDNLKEKLFDEVNKDKKLHSIVSSRMKRKFSVLINTKGSLGVKSNFTIFTNPKSEGLDQDYDEDEN

KAA0057874.1 gag protease polyprotein [Cucumis melo var. makuwa]1.1e-1862.11Show/hide
Query:  LSVSTSKKNRPSTSTFDRLKVTSDQPKRKKDNLKEKLFDEVNKDKKLHSIVSSRMKRKFSVLINTKGSLGVKSNFTIFTNPKSEGLDQDYDEDEN
        LS+STSKK+RPSTS FDRLK+T+DQ +R+   LKEK F E N D K+H+ VSSRMKRK SV INT+GSL VK  F IFTNP +EG ++  DE+++
Subjt:  LSVSTSKKNRPSTSTFDRLKVTSDQPKRKKDNLKEKLFDEVNKDKKLHSIVSSRMKRKFSVLINTKGSLGVKSNFTIFTNPKSEGLDQDYDEDEN

TYK08944.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.4e-1861.05Show/hide
Query:  LSVSTSKKNRPSTSTFDRLKVTSDQPKRKKDNLKEKLFDEVNKDKKLHSIVSSRMKRKFSVLINTKGSLGVKSNFTIFTNPKSEGLDQDYDEDEN
        LS+STSKK+RPSTSTFDRLK+T+DQ +R+  +LK K F E N D K+H+ V SRMKRK SV INT+GSL VK  F IFTNP +EG ++ +DE+++
Subjt:  LSVSTSKKNRPSTSTFDRLKVTSDQPKRKKDNLKEKLFDEVNKDKKLHSIVSSRMKRKFSVLINTKGSLGVKSNFTIFTNPKSEGLDQDYDEDEN

TYK18884.1 gag protease polyprotein [Cucumis melo var. makuwa]7.0e-1861.05Show/hide
Query:  LSVSTSKKNRPSTSTFDRLKVTSDQPKRKKDNLKEKLFDEVNKDKKLHSIVSSRMKRKFSVLINTKGSLGVKSNFTIFTNPKSEGLDQDYDEDEN
        LS+STSKK+RPSTSTFDRLK+T+DQ +R+  +LK K F E N D K+HS V SRMKRK S+ INTKGSL VK    IFTNP +EG ++  DE+++
Subjt:  LSVSTSKKNRPSTSTFDRLKVTSDQPKRKKDNLKEKLFDEVNKDKKLHSIVSSRMKRKFSVLINTKGSLGVKSNFTIFTNPKSEGLDQDYDEDEN

TrEMBL top hitse value%identityAlignment
A0A5A7TQ06 Retrotransposon gag protein3.4e-1861.05Show/hide
Query:  LSVSTSKKNRPSTSTFDRLKVTSDQPKRKKDNLKEKLFDEVNKDKKLHSIVSSRMKRKFSVLINTKGSLGVKSNFTIFTNPKSEGLDQDYDEDEN
        LS+STSKK+RPSTS FDRLK+T+DQ +R+  +LK K F E N D K+HS V SRMKRK SV INT+GSL VK  F IFTNP +EG ++  DE+++
Subjt:  LSVSTSKKNRPSTSTFDRLKVTSDQPKRKKDNLKEKLFDEVNKDKKLHSIVSSRMKRKFSVLINTKGSLGVKSNFTIFTNPKSEGLDQDYDEDEN

A0A5A7UI09 Retrotransposon gag protein6.8e-1961.05Show/hide
Query:  LSVSTSKKNRPSTSTFDRLKVTSDQPKRKKDNLKEKLFDEVNKDKKLHSIVSSRMKRKFSVLINTKGSLGVKSNFTIFTNPKSEGLDQDYDEDEN
        LS+STSKK+RPSTSTFDRLK+T+DQ +R+  +LK K F E N D K+H+ V SRMKRK SV INT+GSL VK  F IFTNP +EG ++ +DE+++
Subjt:  LSVSTSKKNRPSTSTFDRLKVTSDQPKRKKDNLKEKLFDEVNKDKKLHSIVSSRMKRKFSVLINTKGSLGVKSNFTIFTNPKSEGLDQDYDEDEN

A0A5A7URU7 Gag protease polyprotein5.2e-1962.11Show/hide
Query:  LSVSTSKKNRPSTSTFDRLKVTSDQPKRKKDNLKEKLFDEVNKDKKLHSIVSSRMKRKFSVLINTKGSLGVKSNFTIFTNPKSEGLDQDYDEDEN
        LS+STSKK+RPSTS FDRLK+T+DQ +R+   LKEK F E N D K+H+ VSSRMKRK SV INT+GSL VK  F IFTNP +EG ++  DE+++
Subjt:  LSVSTSKKNRPSTSTFDRLKVTSDQPKRKKDNLKEKLFDEVNKDKKLHSIVSSRMKRKFSVLINTKGSLGVKSNFTIFTNPKSEGLDQDYDEDEN

A0A5D3CCI8 Retrotransposon gag protein6.8e-1961.05Show/hide
Query:  LSVSTSKKNRPSTSTFDRLKVTSDQPKRKKDNLKEKLFDEVNKDKKLHSIVSSRMKRKFSVLINTKGSLGVKSNFTIFTNPKSEGLDQDYDEDEN
        LS+STSKK+RPSTSTFDRLK+T+DQ +R+  +LK K F E N D K+H+ V SRMKRK SV INT+GSL VK  F IFTNP +EG ++ +DE+++
Subjt:  LSVSTSKKNRPSTSTFDRLKVTSDQPKRKKDNLKEKLFDEVNKDKKLHSIVSSRMKRKFSVLINTKGSLGVKSNFTIFTNPKSEGLDQDYDEDEN

A0A5D3D5Q0 Gag protease polyprotein3.4e-1861.05Show/hide
Query:  LSVSTSKKNRPSTSTFDRLKVTSDQPKRKKDNLKEKLFDEVNKDKKLHSIVSSRMKRKFSVLINTKGSLGVKSNFTIFTNPKSEGLDQDYDEDEN
        LS+STSKK+RPSTSTFDRLK+T+DQ +R+  +LK K F E N D K+HS V SRMKRK S+ INTKGSL VK    IFTNP +EG ++  DE+++
Subjt:  LSVSTSKKNRPSTSTFDRLKVTSDQPKRKKDNLKEKLFDEVNKDKKLHSIVSSRMKRKFSVLINTKGSLGVKSNFTIFTNPKSEGLDQDYDEDEN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTTGCAAAAATGGAGGCCCAAACAGGCCCTAAGTGTCTCTACATCGAAGAAAAATCGACCTTCAACATCTACCTTTGATCGCCTCAAAGTAACAAGCGATCAACC
TAAAAGAAAGAAAGACAACTTGAAGGAGAAACTGTTCGATGAAGTAAACAAGGACAAGAAGTTGCATAGTATCGTCTCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCA
TAAATACAAAAGGTTCCTTGGGAGTAAAGTCAAATTTCACTATCTTTACCAATCCTAAAAGTGAAGGACTTGATCAAGACTATGATGAAGATGAAAACTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTTGCAAAAATGGAGGCCCAAACAGGCCCTAAGTGTCTCTACATCGAAGAAAAATCGACCTTCAACATCTACCTTTGATCGCCTCAAAGTAACAAGCGATCAACC
TAAAAGAAAGAAAGACAACTTGAAGGAGAAACTGTTCGATGAAGTAAACAAGGACAAGAAGTTGCATAGTATCGTCTCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCA
TAAATACAAAAGGTTCCTTGGGAGTAAAGTCAAATTTCACTATCTTTACCAATCCTAAAAGTGAAGGACTTGATCAAGACTATGATGAAGATGAAAACTTTTAA
Protein sequenceShow/hide protein sequence
MGLQKWRPKQALSVSTSKKNRPSTSTFDRLKVTSDQPKRKKDNLKEKLFDEVNKDKKLHSIVSSRMKRKFSVLINTKGSLGVKSNFTIFTNPKSEGLDQDYDEDENF