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Lag0025577 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025577
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibosome associated membrane protein RAMP4
Genome locationchr10:15581946..15582299
RNA-Seq ExpressionLag0025577
SyntenyLag0025577
Gene Ontology termsGO:0005783 - endoplasmic reticulum (cellular component)
GO:0016020 - membrane (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsIPR010580 - Stress-associated endoplasmic reticulum protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27330.1 Ribosome associated membrane protein RAMP42.3e-0466.67Show/hide
Query:  QKGF---SSSKKGYDYSVAPILLGFFVFVVIGS
        ++GF   +++KKG DY V PILLGFFVFVVIGS
Subjt:  QKGF---SSSKKGYDYSVAPILLGFFVFVVIGS
AT1G27350.1 Ribosome associated membrane protein RAMP42.3e-0466.67Show/hide
Query:  QKGF---SSSKKGYDYSVAPILLGFFVFVVIGS
        ++GF   +++KKG DY V PILLGFFVFVVIGS
Subjt:  QKGF---SSSKKGYDYSVAPILLGFFVFVVIGS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTTGCTGAAATTGGGAGACCATTTCGAAGCGTGTAGCGGAGAGGAAAGTTGCCAAGTTCCAGAAGAATATCAGCAGAAGGGGTTTAGTTCCTCCAAGAAAGGATA
TGATTATTCAGTTGCTCCAATTCTTCTTGGCTTCTTCGTCTTCGTTGTTATTGGATCATGTGTGCCTTCTTCTTGCTTGCTTCTACGATTTCTTCTAATTCTCTCTAGAA
TGGTTACTTTCTGTTGTCTTGCGCCCTGCTACTGCTACGCCTTTTTCTTATACATCTTTATTCTTATCGAATCATGTAACCTAAGCACAGTTCAACTAGTTAAACCTTAC
ATCCTCGAACAGTTGGTACGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTTTGCTGAAATTGGGAGACCATTTCGAAGCGTGTAGCGGAGAGGAAAGTTGCCAAGTTCCAGAAGAATATCAGCAGAAGGGGTTTAGTTCCTCCAAGAAAGGATA
TGATTATTCAGTTGCTCCAATTCTTCTTGGCTTCTTCGTCTTCGTTGTTATTGGATCATGTGTGCCTTCTTCTTGCTTGCTTCTACGATTTCTTCTAATTCTCTCTAGAA
TGGTTACTTTCTGTTGTCTTGCGCCCTGCTACTGCTACGCCTTTTTCTTATACATCTTTATTCTTATCGAATCATGTAACCTAAGCACAGTTCAACTAGTTAAACCTTAC
ATCCTCGAACAGTTGGTACGTTAG
Protein sequenceShow/hide protein sequence
MCLLKLGDHFEACSGEESCQVPEEYQQKGFSSSKKGYDYSVAPILLGFFVFVVIGSCVPSSCLLLRFLLILSRMVTFCCLAPCYCYAFFLYIFILIESCNLSTVQLVKPY
ILEQLVR