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Lag0025608 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025608
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPre-mRNA-splicing factor SLU7
Genome locationchr10:16204046..16207086
RNA-Seq ExpressionLag0025608
SyntenyLag0025608
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0008380 - RNA splicing (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020985.1 Protein prenyltransferase alpha subunit repeat-containing protein 1 [Cucurbita argyrosperma subsp. argyrosperma]2.8e-1633.69Show/hide
Query:  QLLNELKETKKWAALHVADNCCFHYR----------------------------KEELDWDEMMIKRYVGRE----------------------------
        Q+LNE+K+T+KWAALHVADNCCFHYR                            KEELDWDEM+IKRYVGRE                            
Subjt:  QLLNELKETKKWAALHVADNCCFHYR----------------------------KEELDWDEMMIKRYVGRE----------------------------

Query:  -----------------------------------------------NCPKSNVIQLEKKLRACSLKTLLYKACPESVMDVRSLVID
                                                       NCPK N+IQL++KL+AC+LKTLLYK CPE    +   +ID
Subjt:  -----------------------------------------------NCPKSNVIQLEKKLRACSLKTLLYKACPESVMDVRSLVID

XP_022149858.1 protein prenyltransferase alpha subunit repeat-containing protein 1 [Momordica charantia]9.5e-1735.8Show/hide
Query:  QLLNELKETKKWAALHVADNCCFHYR----------------------------KEELDWDEMMIKRYVGRE----------------------------
        Q+LNELKET+KWAALHVADNCCFHYR                            KEELDWDEM+IKRY+GRE                            
Subjt:  QLLNELKETKKWAALHVADNCCFHYR----------------------------KEELDWDEMMIKRYVGRE----------------------------

Query:  -----------------------------------------------NCPKSNVIQLEKKLRACSLKTLLYKACPE
                                                       NCPK +VI+L++KLRAC+LKTLLYKACPE
Subjt:  -----------------------------------------------NCPKSNVIQLEKKLRACSLKTLLYKACPE

XP_022937607.1 protein prenyltransferase alpha subunit repeat-containing protein 1 isoform X1 [Cucurbita moschata]2.8e-1633.69Show/hide
Query:  QLLNELKETKKWAALHVADNCCFHYR----------------------------KEELDWDEMMIKRYVGRE----------------------------
        Q+LNE+K+T+KWAALHVADNCCFHYR                            KEELDWDEM+IKRYVGRE                            
Subjt:  QLLNELKETKKWAALHVADNCCFHYR----------------------------KEELDWDEMMIKRYVGRE----------------------------

Query:  -----------------------------------------------NCPKSNVIQLEKKLRACSLKTLLYKACPESVMDVRSLVID
                                                       NCPK N+IQL++KL+AC+LKTLLYK CPE    +   +ID
Subjt:  -----------------------------------------------NCPKSNVIQLEKKLRACSLKTLLYKACPESVMDVRSLVID

XP_022965495.1 geranylgeranyl transferase type-2 subunit alpha [Cucurbita maxima]1.6e-1635.2Show/hide
Query:  PIFQLLNELKETKKWAALHVADNCCFHYR----------------------------KEELDWDEMMIKRYVGRE-------------------------
        P  Q+LNE+K+T+KWAALHVADNCCFHYR                            KEELDWDEM+IKRYVGRE                         
Subjt:  PIFQLLNELKETKKWAALHVADNCCFHYR----------------------------KEELDWDEMMIKRYVGRE-------------------------

Query:  --------------------------------------------------NCPKSNVIQLEKKLRACSLKTLLYKACPE
                                                          NCPK N+IQLE+KL+AC+LKTLLYK CPE
Subjt:  --------------------------------------------------NCPKSNVIQLEKKLRACSLKTLLYKACPE

XP_023538443.1 protein prenyltransferase alpha subunit repeat-containing protein 1 isoform X2 [Cucurbita pepo subsp. pepo]2.8e-1635.23Show/hide
Query:  QLLNELKETKKWAALHVADNCCFHYR----------------------------KEELDWDEMMIKRYVGRE----------------------------
        Q+LNE+K+T+KWAALHVADNCCFHYR                            KEELDWDEM+IKRYVGRE                            
Subjt:  QLLNELKETKKWAALHVADNCCFHYR----------------------------KEELDWDEMMIKRYVGRE----------------------------

Query:  -----------------------------------------------NCPKSNVIQLEKKLRACSLKTLLYKACPE
                                                       NCPK N+IQLE+KL+AC+LKTLLYK CPE
Subjt:  -----------------------------------------------NCPKSNVIQLEKKLRACSLKTLLYKACPE

TrEMBL top hitse value%identityAlignment
A0A1S3B4C5 protein prenyltransferase alpha subunit repeat-containing protein 11.4e-1052.78Show/hide
Query:  QLLNELKETKKWAALHVADNCCFHYR----------------------------KEELDWDEMMIKRYVGRE
        Q+L EL ET+KWAALHVADNCCFHYR                            KEELDWDEM+IKRY+GRE
Subjt:  QLLNELKETKKWAALHVADNCCFHYR----------------------------KEELDWDEMMIKRYVGRE

A0A6J1D7W4 protein prenyltransferase alpha subunit repeat-containing protein 14.6e-1735.8Show/hide
Query:  QLLNELKETKKWAALHVADNCCFHYR----------------------------KEELDWDEMMIKRYVGRE----------------------------
        Q+LNELKET+KWAALHVADNCCFHYR                            KEELDWDEM+IKRY+GRE                            
Subjt:  QLLNELKETKKWAALHVADNCCFHYR----------------------------KEELDWDEMMIKRYVGRE----------------------------

Query:  -----------------------------------------------NCPKSNVIQLEKKLRACSLKTLLYKACPE
                                                       NCPK +VI+L++KLRAC+LKTLLYKACPE
Subjt:  -----------------------------------------------NCPKSNVIQLEKKLRACSLKTLLYKACPE

A0A6J1FBP7 protein prenyltransferase alpha subunit repeat-containing protein 1 isoform X11.3e-1633.69Show/hide
Query:  QLLNELKETKKWAALHVADNCCFHYR----------------------------KEELDWDEMMIKRYVGRE----------------------------
        Q+LNE+K+T+KWAALHVADNCCFHYR                            KEELDWDEM+IKRYVGRE                            
Subjt:  QLLNELKETKKWAALHVADNCCFHYR----------------------------KEELDWDEMMIKRYVGRE----------------------------

Query:  -----------------------------------------------NCPKSNVIQLEKKLRACSLKTLLYKACPESVMDVRSLVID
                                                       NCPK N+IQL++KL+AC+LKTLLYK CPE    +   +ID
Subjt:  -----------------------------------------------NCPKSNVIQLEKKLRACSLKTLLYKACPESVMDVRSLVID

A0A6J1FGG2 protein prenyltransferase alpha subunit repeat-containing protein 1 isoform X22.2e-1154.17Show/hide
Query:  QLLNELKETKKWAALHVADNCCFHYR----------------------------KEELDWDEMMIKRYVGRE
        Q+LNE+K+T+KWAALHVADNCCFHYR                            KEELDWDEM+IKRYVGRE
Subjt:  QLLNELKETKKWAALHVADNCCFHYR----------------------------KEELDWDEMMIKRYVGRE

A0A6J1HNV7 geranylgeranyl transferase type-2 subunit alpha7.8e-1735.2Show/hide
Query:  PIFQLLNELKETKKWAALHVADNCCFHYR----------------------------KEELDWDEMMIKRYVGRE-------------------------
        P  Q+LNE+K+T+KWAALHVADNCCFHYR                            KEELDWDEM+IKRYVGRE                         
Subjt:  PIFQLLNELKETKKWAALHVADNCCFHYR----------------------------KEELDWDEMMIKRYVGRE-------------------------

Query:  --------------------------------------------------NCPKSNVIQLEKKLRACSLKTLLYKACPE
                                                          NCPK N+IQLE+KL+AC+LKTLLYK CPE
Subjt:  --------------------------------------------------NCPKSNVIQLEKKLRACSLKTLLYKACPE

SwissProt top hitse value%identityAlignment
A2YQU8 Pre-mRNA-splicing factor SLU74.0e-1094.12Show/hide
Query:  AFKSREDHRKQLELEEARKAGLAPAEIDEDGKEI
        +FKSREDHRKQLELEEARKAGLAPAE+DEDGKEI
Subjt:  AFKSREDHRKQLELEEARKAGLAPAEIDEDGKEI

O23174 Pre-mRNA-splicing factor SLU7-B5.2e-1094.12Show/hide
Query:  AFKSREDHRKQLELEEARKAGLAPAEIDEDGKEI
        AFKSREDHRK+LELEEARKAGLAPAE+DEDGKEI
Subjt:  AFKSREDHRKQLELEEARKAGLAPAEIDEDGKEI

Q54TA0 Pre-mRNA-splicing factor slu72.5e-0465.62Show/hide
Query:  KSREDHRKQLELEEARKAGLAPAEIDEDGKEI
        K+R++++K+ EL+EARKAG APAE+DE+GKEI
Subjt:  KSREDHRKQLELEEARKAGLAPAEIDEDGKEI

Q6ZK48 Pre-mRNA-splicing factor SLU74.0e-1094.12Show/hide
Query:  AFKSREDHRKQLELEEARKAGLAPAEIDEDGKEI
        +FKSREDHRKQLELEEARKAGLAPAE+DEDGKEI
Subjt:  AFKSREDHRKQLELEEARKAGLAPAEIDEDGKEI

Q9SHY8 Pre-mRNA-splicing factor SLU7-A3.1e-1094.12Show/hide
Query:  AFKSREDHRKQLELEEARKAGLAPAEIDEDGKEI
        AFKSREDHRKQ+ELEEARKAGLAPAE+DEDGKEI
Subjt:  AFKSREDHRKQLELEEARKAGLAPAEIDEDGKEI

Arabidopsis top hitse value%identityAlignment
AT1G10095.1 Protein prenylyltransferase superfamily protein4.1e-1036.54Show/hide
Query:  IFQLLNELKETKKWAALHVADNCCFHYR----------------------------KEELDWDEMMIKRYVGRENCPKSNVIQLEKKLRACSLKTLLYKA
        I Q++ EL ++K+WA LHVAD+ CFHYR                            KEELDW+E +++RYVGRE         L    R  SL  ++Y A
Subjt:  IFQLLNELKETKKWAALHVADNCCFHYR----------------------------KEELDWDEMMIKRYVGRENCPKSNVIQLEKKLRACSLKTLLYKA

Query:  CPES
        C  S
Subjt:  CPES

AT1G65660.1 Pre-mRNA splicing Prp18-interacting factor2.2e-1194.12Show/hide
Query:  AFKSREDHRKQLELEEARKAGLAPAEIDEDGKEI
        AFKSREDHRKQ+ELEEARKAGLAPAE+DEDGKEI
Subjt:  AFKSREDHRKQLELEEARKAGLAPAEIDEDGKEI

AT3G45950.1 Pre-mRNA splicing Prp18-interacting factor1.2e-0988.24Show/hide
Query:  AFKSREDHRKQLELEEARKAGLAPAEIDEDGKEI
        AFKSR+DHRKQ ELEEARKAGLAPAE+DE GKEI
Subjt:  AFKSREDHRKQLELEEARKAGLAPAEIDEDGKEI

AT4G37120.1 Pre-mRNA splicing Prp18-interacting factor3.7e-1194.12Show/hide
Query:  AFKSREDHRKQLELEEARKAGLAPAEIDEDGKEI
        AFKSREDHRK+LELEEARKAGLAPAE+DEDGKEI
Subjt:  AFKSREDHRKQLELEEARKAGLAPAEIDEDGKEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTTCGTGGTCTTCGCAGCTCTGTATTCGTGGTCTTCGCAGCACCGTTCAACCTCCTCGCAGCACCTGTCAAGAGAACAGGCTCAATTGCATTGTTCTTATGGTAG
ACTCCAAAAACATCCAATCTTTCAGTTGTTGAATGAATTAAAGGAAACCAAAAAATGGGCAGCGTTGCATGTTGCTGACAATTGTTGCTTCCACTATCGCAAAGAAGAGC
TTGATTGGGATGAAATGATGATAAAGCGATATGTTGGAAGAGAGAATTGTCCAAAGTCTAATGTGATTCAATTGGAGAAGAAGCTTAGAGCATGCAGTTTGAAGACTTTG
CTTTACAAAGCATGCCCAGAAAGCGTGATGGATGTTAGATCACTTGTTATTGATGTGCAATTATACTACGTTCATAAATTTGCTTTCAAATCTAGGGAAGACCATCGCAA
ACAACTTGAATTAGAGGAAGCGCGTAAGGCCGGGCTTGCACCAGCTGAGATCGATGAAGATGGGAAAGAAATATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGTTCGTGGTCTTCGCAGCTCTGTATTCGTGGTCTTCGCAGCACCGTTCAACCTCCTCGCAGCACCTGTCAAGAGAACAGGCTCAATTGCATTGTTCTTATGGTAG
ACTCCAAAAACATCCAATCTTTCAGTTGTTGAATGAATTAAAGGAAACCAAAAAATGGGCAGCGTTGCATGTTGCTGACAATTGTTGCTTCCACTATCGCAAAGAAGAGC
TTGATTGGGATGAAATGATGATAAAGCGATATGTTGGAAGAGAGAATTGTCCAAAGTCTAATGTGATTCAATTGGAGAAGAAGCTTAGAGCATGCAGTTTGAAGACTTTG
CTTTACAAAGCATGCCCAGAAAGCGTGATGGATGTTAGATCACTTGTTATTGATGTGCAATTATACTACGTTCATAAATTTGCTTTCAAATCTAGGGAAGACCATCGCAA
ACAACTTGAATTAGAGGAAGCGCGTAAGGCCGGGCTTGCACCAGCTGAGATCGATGAAGATGGGAAAGAAATATAA
Protein sequenceShow/hide protein sequence
MPFVVFAALYSWSSQHRSTSSQHLSREQAQLHCSYGRLQKHPIFQLLNELKETKKWAALHVADNCCFHYRKEELDWDEMMIKRYVGRENCPKSNVIQLEKKLRACSLKTL
LYKACPESVMDVRSLVIDVQLYYVHKFAFKSREDHRKQLELEEARKAGLAPAEIDEDGKEI