; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025613 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025613
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionX-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like
Genome locationchr10:16305173..16305868
RNA-Seq ExpressionLag0025613
SyntenyLag0025613
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583719.1 hypothetical protein SDJN03_19651, partial [Cucurbita argyrosperma subsp. sororia]1.3e-5664.78Show/hide
Query:  MEENPQAIDLDSNESLMNLDVRGNWSSKVERLKRMVKFVVSVCVFCLGVALFLSLFSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICNGILFLLATSSV
        ME+  + I++DS ESL +LD   + S+ VERLKRMVKF+VS+CVF L +ALF S FSVFPHS +VYFSTFLFSLLNH MERK+MFLICNGILFLLATSSV
Subjt:  MEENPQAIDLDSNESLMNLDVRGNWSSKVERLKRMVKFVVSVCVFCLGVALFLSLFSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICNGILFLLATSSV

Query:  IQD-------SSSSSFGTCSFSHYDDNDHFEQSLVA-AIDGSDSEEEFEDQQNQKREEEEEEEEEEEEISGIVELEEELEEEDEGCFTDEV-------EE
        +QD       SSSSSFG CSFSH   +D FE  LVA A DG DS+E  E +  +  +E E+E EE+EE           +EEDEGCFT+EV       EE
Subjt:  IQD-------SSSSSFGTCSFSHYDDNDHFEQSLVA-AIDGSDSEEEFEDQQNQKREEEEEEEEEEEEISGIVELEEELEEEDEGCFTDEV-------EE

Query:  EEEEGKWRELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT-HLIAV
        EEEEG  R+LEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT  LIAV
Subjt:  EEEEGKWRELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT-HLIAV

KAG7019366.1 hypothetical protein SDJN02_18326, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-5665.45Show/hide
Query:  MEENPQAIDLDSNESLMNLDVRGNWSSKVERLKRMVKFVVSVCVFCLGVALFLSLFSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICNGILFLLATSSV
        ME+  +AI++DS ESL +LD   + S+ VERLKRMVKF+VS+CVF L +ALF S FS+FPHS +VYFSTFLFSLLNH MERK+MFLICNGILFLLATSSV
Subjt:  MEENPQAIDLDSNESLMNLDVRGNWSSKVERLKRMVKFVVSVCVFCLGVALFLSLFSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICNGILFLLATSSV

Query:  IQD-------SSSSSFGTCSFSHYDDNDHFEQSLVA-AIDGSDSEEEFEDQQNQKREEEEEEEEEEEEISGIVELEEELEEEDEGCFTDEV------EEE
        +QD       SSSSSFG CSFSH   +D FE  LVA A DG DS+E  E+Q+++   E+E E+E E         E+E +EEDEGCFT+EV      EEE
Subjt:  IQD-------SSSSSFGTCSFSHYDDNDHFEQSLVA-AIDGSDSEEEFEDQQNQKREEEEEEEEEEEEISGIVELEEELEEEDEGCFTDEV------EEE

Query:  EEEGKWRELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT-HLIAV
        EEEG  R+LEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT  LIAV
Subjt:  EEEGKWRELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT-HLIAV

XP_022927104.1 X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like [Cucurbita moschata]3.7e-5665.59Show/hide
Query:  MEENPQAIDLDSNESLMNLDVRGNWSSKVERLKRMVKFVVSVCVFCLGVALFLSLFSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICNGILFLLATSSV
        ME   +AI++DS ESL +LD   + ++ VERLKRMVKF+VS+CVF L +ALF S FS+FPHS +VYFSTFLFSLLNH MERK+MFLICNGILFLLATSSV
Subjt:  MEENPQAIDLDSNESLMNLDVRGNWSSKVERLKRMVKFVVSVCVFCLGVALFLSLFSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICNGILFLLATSSV

Query:  IQD--------SSSSSFGTCSFSHYDDNDHFEQSLVA-AIDGSDSEEEFEDQQNQKREEEEEEEEEEEEISGIVELEEELE-----EEDEGCFTDEV-EE
        +QD        SSSSSFG  SFSH   +D FE  LVA A DG DS+E  E +  +  +E E+E E+E E     E E+E E     EEDEGCFT+EV EE
Subjt:  IQD--------SSSSSFGTCSFSHYDDNDHFEQSLVA-AIDGSDSEEEFEDQQNQKREEEEEEEEEEEEISGIVELEEELE-----EEDEGCFTDEV-EE

Query:  EEEEGKWRELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT-HLIAV
        EEEEGK R+LEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT  LIAV
Subjt:  EEEEGKWRELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT-HLIAV

XP_031736046.1 uncharacterized protein LOC105434473 [Cucumis sativus]6.3e-4863.75Show/hide
Query:  DSNESLMNLDV-------RGNWSSKVERLKRMVKFVVSVCVFCLGVALFLSLFSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICN-GILFLLATSSVIQ
        +S+ +L N DV         N SSKVE LKRMVK    + VFCL + LF SLFS+FPHS SVYFSTFLFS+L HA+ERKYMFLICN GILFLLATSSV  
Subjt:  DSNESLMNLDV-------RGNWSSKVERLKRMVKFVVSVCVFCLGVALFLSLFSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICN-GILFLLATSSVIQ

Query:  DSSSSSFGT-CSFSHYDDNDH---FEQSLVAAIDGSDSEEEFEDQQNQKREEEEEEEEEEEEISGIVELEEELEEEDEGCFTDEVEEEEE-------EGK
         SSSSSFG  C F H   N H   FE  +VAA+          D+++     +EEEEE+EE I     LEEEL EEDEGCFTDEVEEEEE       EGK
Subjt:  DSSSSSFGT-CSFSHYDDNDH---FEQSLVAAIDGSDSEEEFEDQQNQKREEEEEEEEEEEEISGIVELEEELEEEDEGCFTDEVEEEEE-------EGK

Query:  WRELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQTHLIAV
         RELE+VVSTEELNKKIEEFIRKMKEEMRIEAAQTHLIAV
Subjt:  WRELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQTHLIAV

XP_038877796.1 glutamic acid-rich protein-like [Benincasa hispida]3.6e-5970.56Show/hide
Query:  MEENPQAIDLDSNESLMNL-----DVRG-----NWSSKVERLKRMVKFVVSVCVFCLGVALFLSLFSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICNG
        MEE P+A +LDSN+SL NL     D+R      N  SKVE L RMVKF     VF L +ALF S FS+FPHS SVYFSTF+FSLLNHAMERKYMFLICNG
Subjt:  MEENPQAIDLDSNESLMNL-----DVRG-----NWSSKVERLKRMVKFVVSVCVFCLGVALFLSLFSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICNG

Query:  ILFLLATSSVIQD--SSSSSFGTCSFSHYDDNDH---FEQSLVAAIDGSDSEEEFEDQQNQKREEEEEEEEEEEEISGIVELEEELEEEDEGCFTDEVE-
        ILFLLATSSVI+D  SSSSSFGTCSF+ + D+ H    E  LVAAIDGSDSEE    QQNQ+ EEEEEEE   +      ELEEE+ EEDEGCFTDEVE 
Subjt:  ILFLLATSSVIQD--SSSSSFGTCSFSHYDDNDH---FEQSLVAAIDGSDSEEEFEDQQNQKREEEEEEEEEEEEISGIVELEEELEEEDEGCFTDEVE-

Query:  -EEEEEGKWRELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQTHLIAV
         +EEEEGK RELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT LIAV
Subjt:  -EEEEEGKWRELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQTHLIAV

TrEMBL top hitse value%identityAlignment
A0A061GIF6 Uncharacterized protein2.6e-1543.25Show/hide
Query:  LDSNESLMNLDVRGNWSSKVERLKRMVKFVVSVCVFCLGVALFL---SLFSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICNGILFLLATSSVIQDSSS
        +D  +  M L   G    +   LKR ++ VVSV +    ++ FL   S F VFPHS SVYFSTFLFS   H +ERKYMFLICNGIL  LA SSV   SS 
Subjt:  LDSNESLMNLDVRGNWSSKVERLKRMVKFVVSVCVFCLGVALFL---SLFSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICNGILFLLATSSVIQDSSS

Query:  S------SFGTCSFS---------HYDDNDHFEQSLVAAIDGSDS--EEEFEDQQNQ-------KREEEEEEEEEEEEISGIVELEEELEEEDEGCFTDE
        S         T S +          Y D+   +  LVA  + ++   E E E+Q  Q       + E +E++EE E E+S IVE + E +E + G    E
Subjt:  S------SFGTCSFS---------HYDDNDHFEQSLVAAIDGSDS--EEEFEDQQNQ-------KREEEEEEEEEEEEISGIVELEEELEEEDEGCFTDE

Query:  VEEEEEEGKWREL---EVVVSTEELNKKIEEFIRKMKEEMRIEAAQTHLIAV
         ++ +EEG    L   E V STE+LN+K EEFIRKMKEE+RIE AQ  LIAV
Subjt:  VEEEEEEGKWREL---EVVVSTEELNKKIEEFIRKMKEEMRIEAAQTHLIAV

A0A0A0LVQ2 Uncharacterized protein2.4e-2954.46Show/hide
Query:  DSNESLMNLDV-------RGNWSSKVERLKRMVKFVVSVCVFCLGVALFLSLFSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICN-GILFLLATSSVIQ
        +S+ +L N DV         N SSKVE LKRMVK    + VFCL + LF SLFS+FPHS SVYFSTFLFS+L HA+ERKYMFLICN GILFLLATSSV  
Subjt:  DSNESLMNLDV-------RGNWSSKVERLKRMVKFVVSVCVFCLGVALFLSLFSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICN-GILFLLATSSVIQ

Query:  DSSSSSFGT-CSFSHYDDNDH---FEQSLVAAIDGSDSEEEFEDQQNQKREEEEEEEEEEEEISGIVELEEELEEEDEGCFTDEVEEEEEEGKWRELEVV
         SSSSSFG  C F H   N H   FE  +VAA+          D+++     +EEEEE+EE I     LEEEL EEDEGCFTDEVEEEEEE K       
Subjt:  DSSSSSFGT-CSFSHYDDNDH---FEQSLVAAIDGSDSEEEFEDQQNQKREEEEEEEEEEEEISGIVELEEELEEEDEGCFTDEVEEEEEEGKWRELEVV

Query:  VSTEELNKKIEEFIRKMKEEMRIE
           E   ++ +E IR   E  RIE
Subjt:  VSTEELNKKIEEFIRKMKEEMRIE

A0A6J1CN51 nardilysin-like6.6e-4360.25Show/hide
Query:  MEENPQAIDLDSNESLMNLD--VRGNWSSKVERLKRMVKFVVSVCVFCLGVALFLSLFSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICNGILFLLATS
        MEE+PQA DLDS+ESL NLD   R NWSSKV+RLK MVKFVVSVCVFCL VALFLSLFS+FPHS ++YFS  LFSLLNHA++R YMFL+CNGIL LLATS
Subjt:  MEENPQAIDLDSNESLMNLD--VRGNWSSKVERLKRMVKFVVSVCVFCLGVALFLSLFSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICNGILFLLATS

Query:  SVIQDSSSSSFGTCSFSHYDDNDHFEQSLVAAIDGSDSEEEFEDQQNQKREEEEEEEEEEEEISGIVELEEELEEEDEGCFTDEVEEEEEEGKWR---EL
          +Q S+       S  H+    H+E      +   + EEE ED  +        +       S I+E     EE+DEGCFTDEVEEEEEE + +   EL
Subjt:  SVIQDSSSSSFGTCSFSHYDDNDHFEQSLVAAIDGSDSEEEFEDQQNQKREEEEEEEEEEEEISGIVELEEELEEEDEGCFTDEVEEEEEEGKWR---EL

Query:  EVVVSTEELNKKIEEFIRKMKEEMRIE---AAQTHLIAV
        EVVVSTEELNKKIEEFIRKMKEEMRI+   AAQT L+AV
Subjt:  EVVVSTEELNKKIEEFIRKMKEEMRIE---AAQTHLIAV

A0A6J1EH25 X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like1.8e-5665.59Show/hide
Query:  MEENPQAIDLDSNESLMNLDVRGNWSSKVERLKRMVKFVVSVCVFCLGVALFLSLFSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICNGILFLLATSSV
        ME   +AI++DS ESL +LD   + ++ VERLKRMVKF+VS+CVF L +ALF S FS+FPHS +VYFSTFLFSLLNH MERK+MFLICNGILFLLATSSV
Subjt:  MEENPQAIDLDSNESLMNLDVRGNWSSKVERLKRMVKFVVSVCVFCLGVALFLSLFSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICNGILFLLATSSV

Query:  IQD--------SSSSSFGTCSFSHYDDNDHFEQSLVA-AIDGSDSEEEFEDQQNQKREEEEEEEEEEEEISGIVELEEELE-----EEDEGCFTDEV-EE
        +QD        SSSSSFG  SFSH   +D FE  LVA A DG DS+E  E +  +  +E E+E E+E E     E E+E E     EEDEGCFT+EV EE
Subjt:  IQD--------SSSSSFGTCSFSHYDDNDHFEQSLVA-AIDGSDSEEEFEDQQNQKREEEEEEEEEEEEISGIVELEEELE-----EEDEGCFTDEV-EE

Query:  EEEEGKWRELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT-HLIAV
        EEEEGK R+LEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT  LIAV
Subjt:  EEEEGKWRELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT-HLIAV

A0A7J9HNS4 Uncharacterized protein1.2e-1544.1Show/hide
Query:  FSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICNGILFLLATSSVIQDSSSSSFGTCSF-----------SHYDDNDHFEQSLVAAIDGSDSEEEFEDQQ
        +S+FPHS +VYFSTFLFS   H +ERKYMF+ICNGIL  +A SSV   S S + G+ +            S  DD    E      +D +++EE  +  +
Subjt:  FSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICNGILFLLATSSVIQDSSSSSFGTCSF-----------SHYDDNDHFEQSLVAAIDGSDSEEEFEDQQ

Query:  NQKREE----------EEEEEEEEEEISGIVELE----EELEEEDEGCFTDEVEEEEEEGKWRELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQ
        N+  E+          EEEEEEEEEE  G V +E    E  +E ++G +  + E     G   EL + +STEELN+KIEEFIRKMKEE+RIEA Q
Subjt:  NQKREE----------EEEEEEEEEEISGIVELE----EELEEEDEGCFTDEVEEEEEEGKWRELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13130.1 unknown protein7.0e-0533.18Show/hide
Query:  KVERLKRMVKFV-VSVCVFCLGVALFLSLFSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICNGILFLLATSSVIQDSSS--SSFGTCSFSHYDDNDHFE
        K E LK++ KF+ VS+ +        LSL +    S   Y   F+  L+ HA+++ YMFL+CNG++ ++A  S +  SS       + +   +D  D   
Subjt:  KVERLKRMVKFV-VSVCVFCLGVALFLSLFSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICNGILFLLATSSVIQDSSS--SSFGTCSFSHYDDNDHFE

Query:  QSLVAAID-------GSDS--EEEFEDQQNQKREEEEEEEEEEEEISGIVELEEELEEEDEGCFTDEVEEEEEEGKWRELEVVVST-EELNKKIEEFIRK
         + +  ++       G++S   EE   +++ K +E E+ EEE+++ + + + +    EE+ G     + EEEE      + V+ ST EE+NKK +EFIRK
Subjt:  QSLVAAID-------GSDS--EEEFEDQQNQKREEEEEEEEEEEEISGIVELEEELEEEDEGCFTDEVEEEEEEGKWRELEVVVST-EELNKKIEEFIRK

Query:  MKEEMRIEAAQTHLIAV
        MKEE+RIE A+ HLI V
Subjt:  MKEEMRIEAAQTHLIAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAAACCCACAAGCCATAGATTTGGATTCAAATGAAAGTTTGATGAATCTTGATGTGAGAGGAAATTGGAGCAGCAAAGTTGAGAGGTTGAAAAGAATGGTGAA
GTTTGTAGTGTCAGTTTGTGTGTTTTGTTTGGGAGTGGCCTTGTTTTTGTCTCTCTTTTCTGTGTTCCCTCATTCATTGAGTGTGTATTTCTCCACTTTCCTCTTCTCTC
TCCTCAACCATGCCATGGAGAGAAAGTACATGTTCTTAATCTGTAATGGAATCCTCTTTCTTCTTGCCACTTCCTCTGTCATTCAAGATTCTTCTTCTTCTTCTTTTGGG
ACTTGTTCATTTTCCCACTATGATGATAATGACCATTTTGAACAATCTCTTGTGGCTGCCATTGATGGGTCTGATTCTGAGGAAGAATTTGAAGATCAGCAAAATCAAAA
AAGGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATTAGTGGAATAGTTGAATTAGAAGAAGAATTAGAAGAAGAAGATGAAGGGTGTTTTACAGATGAGGTTG
AAGAAGAAGAAGAAGAAGGAAAATGGAGAGAATTAGAGGTGGTGGTGAGTACAGAAGAATTGAACAAGAAAATAGAAGAGTTTATTAGGAAAATGAAAGAGGAAATGAGG
ATTGAAGCAGCTCAAACTCACCTCATTGCAGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAAACCCACAAGCCATAGATTTGGATTCAAATGAAAGTTTGATGAATCTTGATGTGAGAGGAAATTGGAGCAGCAAAGTTGAGAGGTTGAAAAGAATGGTGAA
GTTTGTAGTGTCAGTTTGTGTGTTTTGTTTGGGAGTGGCCTTGTTTTTGTCTCTCTTTTCTGTGTTCCCTCATTCATTGAGTGTGTATTTCTCCACTTTCCTCTTCTCTC
TCCTCAACCATGCCATGGAGAGAAAGTACATGTTCTTAATCTGTAATGGAATCCTCTTTCTTCTTGCCACTTCCTCTGTCATTCAAGATTCTTCTTCTTCTTCTTTTGGG
ACTTGTTCATTTTCCCACTATGATGATAATGACCATTTTGAACAATCTCTTGTGGCTGCCATTGATGGGTCTGATTCTGAGGAAGAATTTGAAGATCAGCAAAATCAAAA
AAGGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATTAGTGGAATAGTTGAATTAGAAGAAGAATTAGAAGAAGAAGATGAAGGGTGTTTTACAGATGAGGTTG
AAGAAGAAGAAGAAGAAGGAAAATGGAGAGAATTAGAGGTGGTGGTGAGTACAGAAGAATTGAACAAGAAAATAGAAGAGTTTATTAGGAAAATGAAAGAGGAAATGAGG
ATTGAAGCAGCTCAAACTCACCTCATTGCAGTGTAA
Protein sequenceShow/hide protein sequence
MEENPQAIDLDSNESLMNLDVRGNWSSKVERLKRMVKFVVSVCVFCLGVALFLSLFSVFPHSLSVYFSTFLFSLLNHAMERKYMFLICNGILFLLATSSVIQDSSSSSFG
TCSFSHYDDNDHFEQSLVAAIDGSDSEEEFEDQQNQKREEEEEEEEEEEEISGIVELEEELEEEDEGCFTDEVEEEEEEGKWRELEVVVSTEELNKKIEEFIRKMKEEMR
IEAAQTHLIAV