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Lag0025630 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025630
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionfatty-acid-binding protein 1-like
Genome locationchr10:16658169..16660215
RNA-Seq ExpressionLag0025630
SyntenyLag0025630
Gene Ontology termsGO:0006631 - fatty acid metabolic process (biological process)
GO:0009813 - flavonoid biosynthetic process (biological process)
GO:0009570 - chloroplast stroma (cellular component)
GO:0005504 - fatty acid binding (molecular function)
GO:0016872 - intramolecular lyase activity (molecular function)
InterPro domainsIPR016088 - Chalcone isomerase, 3-layer sandwich
IPR016089 - Chalcone isomerase, orthogonal bundle domain superfamily
IPR044228 - Fatty-acid-binding protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064077.1 fatty-acid-binding protein 1 isoform X1 [Cucumis melo var. makuwa]1.1e-2470.21Show/hide
Query:  GVYADNNDIKESLSDKYGKLTIFELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNC---FTKNLNDKTKV
        GVYADN+DIKESLS+KYGKLT+ ELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEES+    +  G    K     FT    D+ K+
Subjt:  GVYADNNDIKESLSDKYGKLTIFELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNC---FTKNLNDKTKV

XP_004146982.1 fatty-acid-binding protein 1 [Cucumis sativus]1.2e-2369.15Show/hide
Query:  GVYADNNDIKESLSDKYGKLTIFELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNC---FTKNLNDKTKV
        GVYADN+DIKESLS+KYGKLT+ ELQEKDFDKDVME DICMTVRLQIVYGKLSIRSVRSAFEES+    +  G    K     FT    D+ K+
Subjt:  GVYADNNDIKESLSDKYGKLTIFELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNC---FTKNLNDKTKV

XP_008451353.1 PREDICTED: fatty-acid-binding protein 1 isoform X1 [Cucumis melo]1.1e-2470.21Show/hide
Query:  GVYADNNDIKESLSDKYGKLTIFELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNC---FTKNLNDKTKV
        GVYADN+DIKESLS+KYGKLT+ ELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEES+    +  G    K     FT    D+ K+
Subjt:  GVYADNNDIKESLSDKYGKLTIFELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNC---FTKNLNDKTKV

XP_008451354.1 PREDICTED: fatty-acid-binding protein 1 isoform X2 [Cucumis melo]1.1e-2470.21Show/hide
Query:  GVYADNNDIKESLSDKYGKLTIFELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNC---FTKNLNDKTKV
        GVYADN+DIKESLS+KYGKLT+ ELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEES+    +  G    K     FT    D+ K+
Subjt:  GVYADNNDIKESLSDKYGKLTIFELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNC---FTKNLNDKTKV

XP_038897036.1 fatty-acid-binding protein 1 [Benincasa hispida]1.1e-2470.21Show/hide
Query:  GVYADNNDIKESLSDKYGKLTIFELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNC---FTKNLNDKTKV
        GVYADN+DIKESLS+KYGKLT+ ELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEES+    +  G    K     FT    D+ K+
Subjt:  GVYADNNDIKESLSDKYGKLTIFELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNC---FTKNLNDKTKV

TrEMBL top hitse value%identityAlignment
A0A0A0KAH6 Chalcone_isomerase domain-containing protein5.9e-2469.15Show/hide
Query:  GVYADNNDIKESLSDKYGKLTIFELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNC---FTKNLNDKTKV
        GVYADN+DIKESLS+KYGKLT+ ELQEKDFDKDVME DICMTVRLQIVYGKLSIRSVRSAFEES+    +  G    K     FT    D+ K+
Subjt:  GVYADNNDIKESLSDKYGKLTIFELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNC---FTKNLNDKTKV

A0A1S3BR98 fatty-acid-binding protein 1 isoform X15.4e-2570.21Show/hide
Query:  GVYADNNDIKESLSDKYGKLTIFELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNC---FTKNLNDKTKV
        GVYADN+DIKESLS+KYGKLT+ ELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEES+    +  G    K     FT    D+ K+
Subjt:  GVYADNNDIKESLSDKYGKLTIFELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNC---FTKNLNDKTKV

A0A1S3BS31 fatty-acid-binding protein 1 isoform X25.4e-2570.21Show/hide
Query:  GVYADNNDIKESLSDKYGKLTIFELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNC---FTKNLNDKTKV
        GVYADN+DIKESLS+KYGKLT+ ELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEES+    +  G    K     FT    D+ K+
Subjt:  GVYADNNDIKESLSDKYGKLTIFELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNC---FTKNLNDKTKV

A0A5A7VAP4 Fatty-acid-binding protein 1 isoform X15.4e-2570.21Show/hide
Query:  GVYADNNDIKESLSDKYGKLTIFELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNC---FTKNLNDKTKV
        GVYADN+DIKESLS+KYGKLT+ ELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEES+    +  G    K     FT    D+ K+
Subjt:  GVYADNNDIKESLSDKYGKLTIFELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNC---FTKNLNDKTKV

A0A6J1KTR9 fatty-acid-binding protein 11.7e-2365.96Show/hide
Query:  GVYADNNDIKESLSDKYGKLTIFELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNC---FTKNLNDKTKV
        GVYADNNDIKESLS+KYGKL++ ELQEK+FDKD+ME DICMTVRLQIVYG+LSIRSVRSAFEES+    +  G    K     FT    D+ K+
Subjt:  GVYADNNDIKESLSDKYGKLTIFELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNC---FTKNLNDKTKV

SwissProt top hitse value%identityAlignment
Q84RK2 Fatty-acid-binding protein 26.6e-0434.09Show/hide
Query:  GVYADNNDIKESLSDKYGKLTIFELQE-KDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNCFTKNLND
        G Y   + + + L  KY  +   +L +  D  KD++  DI M+VRL + Y  L I +VR  FE+SL         +T  NC    LND
Subjt:  GVYADNNDIKESLSDKYGKLTIFELQE-KDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNCFTKNLND

Q9M1X2 Fatty-acid-binding protein 13.5e-1347.37Show/hide
Query:  GVYADNNDIKESLSDKYGKLTIFELQ-EKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTK---NCFTKNLNDKTKV
        GVYAD +D+K+ + DKY  L   E++  K F  D+ME DI MT+RLQIVYGKL+IRSVR+AF+ES+    K  G          FT    D+ K+
Subjt:  GVYADNNDIKESLSDKYGKLTIFELQ-EKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTK---NCFTKNLNDKTKV

Arabidopsis top hitse value%identityAlignment
AT2G26310.1 Chalcone-flavanone isomerase family protein4.7e-0534.09Show/hide
Query:  GVYADNNDIKESLSDKYGKLTIFELQE-KDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNCFTKNLND
        G Y   + + + L  KY  +   +L +  D  KD++  DI M+VRL + Y  L I +VR  FE+SL         +T  NC    LND
Subjt:  GVYADNNDIKESLSDKYGKLTIFELQE-KDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNCFTKNLND

AT2G26310.2 Chalcone-flavanone isomerase family protein2.3e-0436.36Show/hide
Query:  GVYADNNDIKESLSDKYGKLTIFELQE-KDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESL
        G Y   + + + L  KY  +   +L +  D  KD++  DI M+VRL + Y  L I +VR  FE+SL
Subjt:  GVYADNNDIKESLSDKYGKLTIFELQE-KDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESL

AT2G26310.3 Chalcone-flavanone isomerase family protein4.7e-0534.09Show/hide
Query:  GVYADNNDIKESLSDKYGKLTIFELQE-KDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNCFTKNLND
        G Y   + + + L  KY  +   +L +  D  KD++  DI M+VRL + Y  L I +VR  FE+SL         +T  NC    LND
Subjt:  GVYADNNDIKESLSDKYGKLTIFELQE-KDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNCFTKNLND

AT3G63170.1 Chalcone-flavanone isomerase family protein2.5e-1447.37Show/hide
Query:  GVYADNNDIKESLSDKYGKLTIFELQ-EKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTK---NCFTKNLNDKTKV
        GVYAD +D+K+ + DKY  L   E++  K F  D+ME DI MT+RLQIVYGKL+IRSVR+AF+ES+    K  G          FT    D+ K+
Subjt:  GVYADNNDIKESLSDKYGKLTIFELQ-EKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTK---NCFTKNLNDKTKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAGTTATTCAAATGAATGGCTGCCTGTAGGTGTTTATGCTGATAATAATGACATAAAAGAGTCACTGAGTGATAAATATGGAAAACTCACCATATTTGAACTACA
AGAAAAGGACTTTGACAAAGATGTCATGGAAGGTGATATATGCATGACTGTTAGACTTCAAATAGTCTACGGAAAACTAAGCATCCGATCTGTTCGAAGTGCTTTTGAAG
AATCGTTGGAACTCGACTCCAAAAGTTTGGGGGTCCAGACAACAAAGAATTGCTTCACAAAGAACCTGAACGACAAGACAAAGGTTTACCTTATTTACGCCAATGTTACA
CTTGAAGATATTCTTTTGAAGTCTTACCGTTGTTCCTACATTGTAGAGGTAGCGAGTCGGAATATTTTGGGCCCTGGTTCTTCAAGTTTGATGTACGAGCAAGATTATGG
TGACAAGAATGAAAGTGGCATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAAGTTATTCAAATGAATGGCTGCCTGTAGGTGTTTATGCTGATAATAATGACATAAAAGAGTCACTGAGTGATAAATATGGAAAACTCACCATATTTGAACTACA
AGAAAAGGACTTTGACAAAGATGTCATGGAAGGTGATATATGCATGACTGTTAGACTTCAAATAGTCTACGGAAAACTAAGCATCCGATCTGTTCGAAGTGCTTTTGAAG
AATCGTTGGAACTCGACTCCAAAAGTTTGGGGGTCCAGACAACAAAGAATTGCTTCACAAAGAACCTGAACGACAAGACAAAGGTTTACCTTATTTACGCCAATGTTACA
CTTGAAGATATTCTTTTGAAGTCTTACCGTTGTTCCTACATTGTAGAGGTAGCGAGTCGGAATATTTTGGGCCCTGGTTCTTCAAGTTTGATGTACGAGCAAGATTATGG
TGACAAGAATGAAAGTGGCATGTAG
Protein sequenceShow/hide protein sequence
MLSYSNEWLPVGVYADNNDIKESLSDKYGKLTIFELQEKDFDKDVMEGDICMTVRLQIVYGKLSIRSVRSAFEESLELDSKSLGVQTTKNCFTKNLNDKTKVYLIYANVT
LEDILLKSYRCSYIVEVASRNILGPGSSSLMYEQDYGDKNESGM