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Lag0025639 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025639
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionreticulon-4-interacting protein 1, mitochondrial
Genome locationchr10:16806601..16807361
RNA-Seq ExpressionLag0025639
SyntenyLag0025639
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577009.1 Reticulon-4-interacting protein 1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2162Show/hide
Query:  MSALLRCRSSQFVRGSPFLAGFRSIVTTCRVVILPRFGGQEVLQLRHD------RGGNWCFFLMGSIVN----EMRSGYGRSIFEPLLPVILGWNISGEV
        M ALLRCR+S+F  GSPFLAGFR+IVTTCR V+LP FGG EVLQLR D      +            +N     MRSGYGRSIFEPLLPVILG +ISGEV
Subjt:  MSALLRCRSSQFVRGSPFLAGFRSIVTTCRVVILPRFGGQEVLQLRHD------RGGNWCFFLMGSIVN----EMRSGYGRSIFEPLLPVILGWNISGEV
KAG7015031.1 Reticulon-4-interacting protein 1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-2162Show/hide
Query:  MSALLRCRSSQFVRGSPFLAGFRSIVTTCRVVILPRFGGQEVLQLRHD------RGGNWCFFLMGSIVN----EMRSGYGRSIFEPLLPVILGWNISGEV
        M ALLRCR+S+F  GSPFLAGFR+IVTTCR V+LP FGG EVLQLR D      +            +N     MRSGYGRSIFEPLLPVILG +ISGEV
Subjt:  MSALLRCRSSQFVRGSPFLAGFRSIVTTCRVVILPRFGGQEVLQLRHD------RGGNWCFFLMGSIVN----EMRSGYGRSIFEPLLPVILGWNISGEV
XP_022922906.1 reticulon-4-interacting protein 1, mitochondrial [Cucurbita moschata]2.2e-2060Show/hide
Query:  MSALLRCRSSQFVRGSPFLAGFRSIVTTCRVVILPRFGGQEVLQLRHD------RGGNWCFFLMGSIVN----EMRSGYGRSIFEPLLPVILGWNISGEV
        M ALLRCR+S+F  GSPFL GFR+IVTTCR V+LP FGG EVLQLR D      +            +N     MRSGYG SIFEPLLPVILG +ISGEV
Subjt:  MSALLRCRSSQFVRGSPFLAGFRSIVTTCRVVILPRFGGQEVLQLRHD------RGGNWCFFLMGSIVN----EMRSGYGRSIFEPLLPVILGWNISGEV
XP_022984733.1 reticulon-4-interacting protein 1, mitochondrial [Cucurbita maxima]9.8e-2161Show/hide
Query:  MSALLRCRSSQFVRGSPFLAGFRSIVTTCRVVILPRFGGQEVLQLRHD------RGGNWCFFLMGSIVN----EMRSGYGRSIFEPLLPVILGWNISGEV
        M ALLRCR+S+F   SPFLAGFR+IVTTCR V+LP FGG EVLQLR D      +            +N     MRSGYGRSIFEPLLPVILG +ISGEV
Subjt:  MSALLRCRSSQFVRGSPFLAGFRSIVTTCRVVILPRFGGQEVLQLRHD------RGGNWCFFLMGSIVN----EMRSGYGRSIFEPLLPVILGWNISGEV
XP_023553198.1 reticulon-4-interacting protein 1, mitochondrial [Cucurbita pepo subsp. pepo]1.5e-2162Show/hide
Query:  MSALLRCRSSQFVRGSPFLAGFRSIVTTCRVVILPRFGGQEVLQLRHD------RGGNWCFFLMGSIVN----EMRSGYGRSIFEPLLPVILGWNISGEV
        M ALLRCR+S+F  GSPFLAGFR+IVTTCR V+LP FGG EVLQLR D      +            +N     MRSGYGRSIFEPLLPVILG +ISGEV
Subjt:  MSALLRCRSSQFVRGSPFLAGFRSIVTTCRVVILPRFGGQEVLQLRHD------RGGNWCFFLMGSIVN----EMRSGYGRSIFEPLLPVILGWNISGEV
TrEMBL top hitse value%identityAlignment
A0A0A0L6P2 PKS_ER domain-containing protein3.2e-1755.45Show/hide
Query:  MSALLRCRSSQFVRGSPFL-AGFRSIVTTCRVVILPRFGGQEVLQLR----------HDRGGNWCFFLMGSIVNEMRSGYGRSIFEPLLPVILGWNISGE
        M ALL   +S+F   SPFL +GFR++VTTCR V+LP FGG EVLQLR          H+     C   +  +   MRSGYGRSIFEPLLPVILG +ISGE
Subjt:  MSALLRCRSSQFVRGSPFL-AGFRSIVTTCRVVILPRFGGQEVLQLR----------HDRGGNWCFFLMGSIVNEMRSGYGRSIFEPLLPVILGWNISGE

Query:  V
        V
Subjt:  V
A0A5A7UZ93 Reticulon-4-interacting protein 13.9e-1553.47Show/hide
Query:  MSALLRCRSSQFVRGSPFL-AGFRSIVTTCRVVILPRFGGQEVLQLR----------HDRGGNWCFFLMGSIVNEMRSGYGRSIFEPLLPVILGWNISGE
        M  LLR  +S+    SPFL +GFR++VTTCR V+LP FGG EVLQLR          H+         +  +   MRSGYGRSIFEPLLPVILG +ISGE
Subjt:  MSALLRCRSSQFVRGSPFL-AGFRSIVTTCRVVILPRFGGQEVLQLR----------HDRGGNWCFFLMGSIVNEMRSGYGRSIFEPLLPVILGWNISGE

Query:  V
        V
Subjt:  V
A0A5D3CLG4 Reticulon-4-interacting protein 13.9e-1553.47Show/hide
Query:  MSALLRCRSSQFVRGSPFL-AGFRSIVTTCRVVILPRFGGQEVLQLR----------HDRGGNWCFFLMGSIVNEMRSGYGRSIFEPLLPVILGWNISGE
        M  LLR  +S+    SPFL +GFR++VTTCR V+LP FGG EVLQLR          H+         +  +   MRSGYGRSIFEPLLPVILG +ISGE
Subjt:  MSALLRCRSSQFVRGSPFL-AGFRSIVTTCRVVILPRFGGQEVLQLR----------HDRGGNWCFFLMGSIVNEMRSGYGRSIFEPLLPVILGWNISGE

Query:  V
        V
Subjt:  V
A0A6J1E5E5 reticulon-4-interacting protein 1, mitochondrial1.1e-2060Show/hide
Query:  MSALLRCRSSQFVRGSPFLAGFRSIVTTCRVVILPRFGGQEVLQLRHD------RGGNWCFFLMGSIVN----EMRSGYGRSIFEPLLPVILGWNISGEV
        M ALLRCR+S+F  GSPFL GFR+IVTTCR V+LP FGG EVLQLR D      +            +N     MRSGYG SIFEPLLPVILG +ISGEV
Subjt:  MSALLRCRSSQFVRGSPFLAGFRSIVTTCRVVILPRFGGQEVLQLRHD------RGGNWCFFLMGSIVN----EMRSGYGRSIFEPLLPVILGWNISGEV
A0A6J1JBD9 reticulon-4-interacting protein 1, mitochondrial4.7e-2161Show/hide
Query:  MSALLRCRSSQFVRGSPFLAGFRSIVTTCRVVILPRFGGQEVLQLRHD------RGGNWCFFLMGSIVN----EMRSGYGRSIFEPLLPVILGWNISGEV
        M ALLRCR+S+F   SPFLAGFR+IVTTCR V+LP FGG EVLQLR D      +            +N     MRSGYGRSIFEPLLPVILG +ISGEV
Subjt:  MSALLRCRSSQFVRGSPFLAGFRSIVTTCRVVILPRFGGQEVLQLRHD------RGGNWCFFLMGSIVN----EMRSGYGRSIFEPLLPVILGWNISGEV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15090.1 GroES-like zinc-binding alcohol dehydrogenase family protein2.6e-1145.12Show/hide
Query:  LAGFRSIVTTCRVVILPRFGGQEVLQLRH-----DRGGNWCFFLMGSI-VN----EMRSGYGRSIFEPLLPVILGWNISGEV
        L   RS+ T CR VILPRFGG EV +LR      +   N       ++ VN     +R+GYGRS+F+P LP+I+G ++SGEV
Subjt:  LAGFRSIVTTCRVVILPRFGGQEVLQLRH-----DRGGNWCFFLMGSI-VN----EMRSGYGRSIFEPLLPVILGWNISGEV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGCTTTACTGCGATGTCGCAGCTCTCAATTCGTTCGTGGATCTCCTTTTCTTGCTGGGTTTCGAAGCATCGTCACCACTTGCAGAGTCGTCATTCTCCCTCGCTT
CGGTGGTCAAGAGGTGCTCCAGCTCCGCCATGACCGTGGAGGCAATTGGTGTTTCTTCTTAATGGGTAGTATCGTGAATGAGATGCGATCGGGCTATGGTCGCTCAATAT
TTGAACCACTTTTGCCAGTCATTTTGGGTTGGAATATCAGTGGTGAAGTTGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGCTTTACTGCGATGTCGCAGCTCTCAATTCGTTCGTGGATCTCCTTTTCTTGCTGGGTTTCGAAGCATCGTCACCACTTGCAGAGTCGTCATTCTCCCTCGCTT
CGGTGGTCAAGAGGTGCTCCAGCTCCGCCATGACCGTGGAGGCAATTGGTGTTTCTTCTTAATGGGTAGTATCGTGAATGAGATGCGATCGGGCTATGGTCGCTCAATAT
TTGAACCACTTTTGCCAGTCATTTTGGGTTGGAATATCAGTGGTGAAGTTGAGTAA
Protein sequenceShow/hide protein sequence
MSALLRCRSSQFVRGSPFLAGFRSIVTTCRVVILPRFGGQEVLQLRHDRGGNWCFFLMGSIVNEMRSGYGRSIFEPLLPVILGWNISGEVE