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Lag0025652 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025652
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag-pro-like protein
Genome locationchr10:17104688..17105032
RNA-Seq ExpressionLag0025652
SyntenyLag0025652
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]5.0e-1470Show/hide
Query:  MEEQDKDMEKMKQEINNLSEQVAKILELLSIGKGKGVVEATHASNPIQEIDDPTYPQGYS
        MEE+DKDM+KM+QEINNL EQV+KILELLS+GKGK  V+ T +SNPIQ+ DDP YP G++
Subjt:  MEEQDKDMEKMKQEINNLSEQVAKILELLSIGKGKGVVEATHASNPIQEIDDPTYPQGYS
KAA0037781.1 uncharacterized protein E6C27_scaffold471G00160 [Cucumis melo var. makuwa]6.5e-1458.67Show/hide
Query:  MEEQDKDMEKMKQEINNLSEQVAKILELLSIGKGKGVVEATHASNPIQEIDDPTYPQGYSSTYKTTHTCSTVTNY
        MEE+DKDM+KM++EINNL EQV+KILELLS+GKGK  V+ T +SNPIQ+IDDP +P G++S +       T  +Y
Subjt:  MEEQDKDMEKMKQEINNLSEQVAKILELLSIGKGKGVVEATHASNPIQEIDDPTYPQGYSSTYKTTHTCSTVTNY
KAA0042502.1 putative RNA-directed DNA polymerase [Cucumis melo var. makuwa]3.8e-1460Show/hide
Query:  MEEQDKDMEKMKQEINNLSEQVAKILELLSIGKGKGVVEATHASNPIQEIDDPTYPQGYSSTYKTTHTCSTVTNY
        M+EQDKDM+KM+QEINNL EQV+KILELLS+GKGK VV+ T +SNPIQ+ DDP YP G++  +       T  +Y
Subjt:  MEEQDKDMEKMKQEINNLSEQVAKILELLSIGKGKGVVEATHASNPIQEIDDPTYPQGYSSTYKTTHTCSTVTNY
KAA0045013.1 Gag-pro-like protein [Cucumis melo var. makuwa]5.0e-1460Show/hide
Query:  MEEQDKDMEKMKQEINNLSEQVAKILELLSIGKGKGVVEATHASNPIQEIDDPTYPQGYSSTYKTTHTCSTVTNY
        MEEQDKDM+KM+QEINNL EQV KILELLS+GKGK VV+   +SNPIQ+ DDP YP G++  +       T+ +Y
Subjt:  MEEQDKDMEKMKQEINNLSEQVAKILELLSIGKGKGVVEATHASNPIQEIDDPTYPQGYSSTYKTTHTCSTVTNY
TYK27304.1 uncharacterized protein E5676_scaffold1784G00170 [Cucumis melo var. makuwa]2.2e-1460Show/hide
Query:  MEEQDKDMEKMKQEINNLSEQVAKILELLSIGKGKGVVEATHASNPIQEIDDPTYPQGYSSTYKTTHTCSTVTNY
        MEE+DKDM+KM+QEINNL EQV+KILELLS+GKGK  V+ T +SNPIQ+IDDP +P G++S +       T  +Y
Subjt:  MEEQDKDMEKMKQEINNLSEQVAKILELLSIGKGKGVVEATHASNPIQEIDDPTYPQGYSSTYKTTHTCSTVTNY
TrEMBL top hitse value%identityAlignment
A0A5A7T1W2 Retrotrans_gag domain-containing protein2.4e-1470Show/hide
Query:  MEEQDKDMEKMKQEINNLSEQVAKILELLSIGKGKGVVEATHASNPIQEIDDPTYPQGYS
        MEE+DKDM+KM+QEINNL EQV+KILELLS+GKGK  V+ T +SNPIQ+ DDP YP G++
Subjt:  MEEQDKDMEKMKQEINNLSEQVAKILELLSIGKGKGVVEATHASNPIQEIDDPTYPQGYS
A0A5A7T858 Uncharacterized protein3.2e-1458.67Show/hide
Query:  MEEQDKDMEKMKQEINNLSEQVAKILELLSIGKGKGVVEATHASNPIQEIDDPTYPQGYSSTYKTTHTCSTVTNY
        MEE+DKDM+KM++EINNL EQV+KILELLS+GKGK  V+ T +SNPIQ+IDDP +P G++S +       T  +Y
Subjt:  MEEQDKDMEKMKQEINNLSEQVAKILELLSIGKGKGVVEATHASNPIQEIDDPTYPQGYSSTYKTTHTCSTVTNY
A0A5A7TGG5 Putative RNA-directed DNA polymerase1.9e-1460Show/hide
Query:  MEEQDKDMEKMKQEINNLSEQVAKILELLSIGKGKGVVEATHASNPIQEIDDPTYPQGYSSTYKTTHTCSTVTNY
        M+EQDKDM+KM+QEINNL EQV+KILELLS+GKGK VV+ T +SNPIQ+ DDP YP G++  +       T  +Y
Subjt:  MEEQDKDMEKMKQEINNLSEQVAKILELLSIGKGKGVVEATHASNPIQEIDDPTYPQGYSSTYKTTHTCSTVTNY
A0A5A7TNC2 Gag-pro-like protein2.4e-1460Show/hide
Query:  MEEQDKDMEKMKQEINNLSEQVAKILELLSIGKGKGVVEATHASNPIQEIDDPTYPQGYSSTYKTTHTCSTVTNY
        MEEQDKDM+KM+QEINNL EQV KILELLS+GKGK VV+   +SNPIQ+ DDP YP G++  +       T+ +Y
Subjt:  MEEQDKDMEKMKQEINNLSEQVAKILELLSIGKGKGVVEATHASNPIQEIDDPTYPQGYSSTYKTTHTCSTVTNY
A0A5D3DUW8 Uncharacterized protein1.1e-1460Show/hide
Query:  MEEQDKDMEKMKQEINNLSEQVAKILELLSIGKGKGVVEATHASNPIQEIDDPTYPQGYSSTYKTTHTCSTVTNY
        MEE+DKDM+KM+QEINNL EQV+KILELLS+GKGK  V+ T +SNPIQ+IDDP +P G++S +       T  +Y
Subjt:  MEEQDKDMEKMKQEINNLSEQVAKILELLSIGKGKGVVEATHASNPIQEIDDPTYPQGYSSTYKTTHTCSTVTNY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGCAAGACAAGGATATGGAGAAAATGAAACAAGAGATCAATAATCTTAGTGAACAAGTAGCGAAAATTCTAGAATTACTTTCAATTGGAAAAGGAAAAGGGGT
TGTAGAAGCAACACATGCAAGCAATCCAATCCAAGAAATCGACGATCCTACTTATCCACAAGGATACTCCTCAACATATAAGACAACGCATACATGTTCCACAGTCACAA
ACTACCCAACAATATGTTGCTATGAATCCACTCTACATTGTTCCTCCTCTTGTCCCAGATATAGAGCAGTTGGAAGCTCAAGTGGAATTCAAATCCATAATATGACAACG
TCTGGTCAACAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGCAAGACAAGGATATGGAGAAAATGAAACAAGAGATCAATAATCTTAGTGAACAAGTAGCGAAAATTCTAGAATTACTTTCAATTGGAAAAGGAAAAGGGGT
TGTAGAAGCAACACATGCAAGCAATCCAATCCAAGAAATCGACGATCCTACTTATCCACAAGGATACTCCTCAACATATAAGACAACGCATACATGTTCCACAGTCACAA
ACTACCCAACAATATGTTGCTATGAATCCACTCTACATTGTTCCTCCTCTTGTCCCAGATATAGAGCAGTTGGAAGCTCAAGTGGAATTCAAATCCATAATATGACAACG
TCTGGTCAACAATAG
Protein sequenceShow/hide protein sequence
MEEQDKDMEKMKQEINNLSEQVAKILELLSIGKGKGVVEATHASNPIQEIDDPTYPQGYSSTYKTTHTCSTVTNYPTICCYESTLHCSSSCPRYRAVGSSSGIQIHNMTT
SGQQ