; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025656 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025656
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr10:17151278..17154886
RNA-Seq ExpressionLag0025656
SyntenyLag0025656
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4346094.1 hypothetical protein G4B88_009149 [Cannabis sativa]1.1e-1532.43Show/hide
Query:  RSRSSAKVINKMNDQLLATFSRSKIERVIKLMHPSKTPSPDGFLAFFFQQ---NWTKKRVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFI
        R R+S K    MND+L   F        + L +  ++PS       + ++      +KRVG G +I  F DPW+P+  +FKP   S       ++V D +
Subjt:  RSRSSAKVINKMNDQLLATFSRSKIERVIKLMHPSKTPSPDGFLAFFFQQ---NWTKKRVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFI

Query:  FPL-YGWDVDKVRKFVTEEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKSGYKVAMVFSKGLVSSSVNTQWQWWCTLWKSKIP
             GW+VD +R    E D + I SI +  F  +D  +WHY ++G+YS+KSGY VA   +    S S +    WW   WK  +P
Subjt:  FPL-YGWDVDKVRKFVTEEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKSGYKVAMVFSKGLVSSSVNTQWQWWCTLWKSKIP

KAF4372268.1 hypothetical protein G4B88_007012 [Cannabis sativa]5.4e-1537.21Show/hide
Query:  KKRVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFIFPL-YGWDVDKVRKFVTEEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKSGYKV
        +KRVG G +I  F DPW+P+  +FKP   S       ++V D +     GW+VD +R    E D + I SI +  F  +D  +WHY ++G+YS+KSGY V
Subjt:  KKRVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFIFPL-YGWDVDKVRKFVTEEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKSGYKV

Query:  AMVFSKGLVSSSVNTQWQWWCTLWKSKIP
        A   +    S S +    WW   WK  +P
Subjt:  AMVFSKGLVSSSVNTQWQWWCTLWKSKIP

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]7.6e-1738.89Show/hide
Query:  RVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFIFPLYGWDVDKVRKFVTEEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKSGYKVAMV
        RVGNG +I  F+DPW+P+  TFKPL+ +   +     V  FI     WDV  +      ED  +I S+ ISS+N  D  +WHY+  G YS++SGYK+ M 
Subjt:  RVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFIFPLYGWDVDKVRKFVTEEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKSGYKVAMV

Query:  FSKGLVSSSVNTQWQWWCTLWKSKIP
              S+S N +   W ++WK  +P
Subjt:  FSKGLVSSSVNTQWQWWCTLWKSKIP

XP_030487384.1 uncharacterized protein LOC115704310 [Cannabis sativa]1.9e-1535.71Show/hide
Query:  RVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFIFPLYGWDVDKVRKFVTEEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKSGYKVAMV
        R+GN  S+    D W+P+ ITFK   +    + +++ V+D   P   WD + VR      DA +I S+  S ++ +DK +WHY+ +G YS++SGY++A  
Subjt:  RVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFIFPLYGWDVDKVRKFVTEEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKSGYKVAMV

Query:  FSKGLVSSSVNTQWQWWCTLWKSKIP
             V S      +WW  LWK KIP
Subjt:  FSKGLVSSSVNTQWQWWCTLWKSKIP

XP_030505522.1 uncharacterized protein LOC115720515 [Cannabis sativa]1.9e-1535.16Show/hide
Query:  KKRVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFIFPLYGWDVDKVRKFVTEEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKSGYKVA
        ++R+GNG +   F DPWIP+  +F P+ +   E+   MMV + I     W++D + +  +  D+++I SI I+ +  DD  +WH+  +G YS+KSGY +A
Subjt:  KKRVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFIFPLYGWDVDKVRKFVTEEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKSGYKVA

Query:  MVFSKGLVSSSVNTQWQWWCTLWKSKIP
        +       SSS      WW + W  KIP
Subjt:  MVFSKGLVSSSVNTQWQWWCTLWKSKIP

TrEMBL top hitse value%identityAlignment
A0A6J1DX30 uncharacterized protein LOC1110248743.7e-1738.89Show/hide
Query:  RVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFIFPLYGWDVDKVRKFVTEEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKSGYKVAMV
        RVGNG +I  F+DPW+P+  TFKPL+ +   +     V  FI     WDV  +      ED  +I S+ ISS+N  D  +WHY+  G YS++SGYK+ M 
Subjt:  RVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFIFPLYGWDVDKVRKFVTEEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKSGYKVAMV

Query:  FSKGLVSSSVNTQWQWWCTLWKSKIP
              S+S N +   W ++WK  +P
Subjt:  FSKGLVSSSVNTQWQWWCTLWKSKIP

A0A7J6DJ25 Uncharacterized protein5.3e-1632.43Show/hide
Query:  RSRSSAKVINKMNDQLLATFSRSKIERVIKLMHPSKTPSPDGFLAFFFQQ---NWTKKRVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFI
        R R+S K    MND+L   F        + L +  ++PS       + ++      +KRVG G +I  F DPW+P+  +FKP   S       ++V D +
Subjt:  RSRSSAKVINKMNDQLLATFSRSKIERVIKLMHPSKTPSPDGFLAFFFQQ---NWTKKRVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFI

Query:  FPL-YGWDVDKVRKFVTEEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKSGYKVAMVFSKGLVSSSVNTQWQWWCTLWKSKIP
             GW+VD +R    E D + I SI +  F  +D  +WHY ++G+YS+KSGY VA   +    S S +    WW   WK  +P
Subjt:  FPL-YGWDVDKVRKFVTEEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKSGYKVAMVFSKGLVSSSVNTQWQWWCTLWKSKIP

A0A803NS66 Uncharacterized protein3.1e-1635.2Show/hide
Query:  RVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFIFPLYGWDVDKVRKFVTEEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKSGYKVAMV
        R+GNG S+    DPW+PK +TFK   +    + +++ VVD       WD + +R      D ++I S++ S +  +DK +WHY+ NG YS +SGY++A  
Subjt:  RVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFIFPLYGWDVDKVRKFVTEEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKSGYKVAMV

Query:  FSKGLVSSSVNTQWQWWCTLWKSKI
             + S+     +WW  LWK KI
Subjt:  FSKGLVSSSVNTQWQWWCTLWKSKI

A0A803PM68 Uncharacterized protein2.5e-1837.3Show/hide
Query:  RVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFIFPLYGWDVDKVRKFVTEEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKSGYKVAMV
        R+GNG S+    DPW+P+ +TFK   +    + E M VVD +     WD + +R F    DA++I  +  S +  +DK +WHY+ NG YS++SGY++A  
Subjt:  RVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFIFPLYGWDVDKVRKFVTEEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKSGYKVAMV

Query:  FSKGLVSSSVNTQWQWWCTLWKSKIP
             + S+     +WW  LWK KIP
Subjt:  FSKGLVSSSVNTQWQWWCTLWKSKIP

A0A803PQQ6 Uncharacterized protein1.6e-1734.13Show/hide
Query:  RVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFIFPLYGWDVDKVRKFVTEEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKSGYKVAMV
        R+GNG  +   +DPW+P+ +TF+   +   E  +++ VVD      GWD   ++    EED  +I ++   S+  +DK +WHY  NG Y+++SGY++A  
Subjt:  RVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFIFPLYGWDVDKVRKFVTEEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKSGYKVAMV

Query:  FSKGLVSSSVNTQWQWWCTLWKSKIP
          +    S+   + QWW +LWK+K+P
Subjt:  FSKGLVSSSVNTQWQWWCTLWKSKIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein2.9e-0629.41Show/hide
Query:  TKKRVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFIF----PLYGWDVDKVRKFVTEEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKS
        T+  +G+G++I    D  +       P +    E   K M ++ +F      Y WD  K+ +FV + D   I  I ++     DK IW+YN  G Y+++S
Subjt:  TKKRVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFIF----PLYGWDVDKVRKFVTEEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKS

Query:  GY
        GY
Subjt:  GY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACCACTCTCAAAGTTCGAGTCCACTGAGTAAGAATAAGATGGTGGTCAATCTTTCAACACCTCAAGATGGACACAAATTGCATATTGGATTTACGGGAACAGATTC
TCCGTTGTCGAATTTCGGCAGTAGGCCAATGGACATATTGTCGACACCATTGGAAACAGTTACAAAGCCTCTCATGGAATGTACGCAGGGATTATATGCAGTTCCGATCG
ACATTAATGGAGCGCCGGTTAATTCTCCATCAGTTACGTCAAGGAAAAATCAGTTGCTTAATCCCCCATTTGTCATTGACTTTCCTGATGTGGTTAACCGGATAGGTCCA
TTCAAACCACCTGCAATTCCCAAACCCAAGATTGAGGTGCAGATCGAGCTAGTAGCAATGAAAGTGACGCAACCAAGACTTACTGATTTGTCTTCGAATCAAGCCCCAGT
TTCAGAGTTTCGCCCATGCACTAAAATGGATTGTTTTGGTTGTAATGGTGGTCTTTGGTTGCTATGGAAAGAGGATGTAGATGTTGGGGTTAGTGCCCTAAAACTCACAG
ATAGTGAATACACTGTGGTGGTGTTCGTGATAATTTCAGCAAAGAAAAGGAATTTTGGGCTGCTGCAATTTTCTGCAAACCTTGAAGAATTTGGCGAAATTCGGTCAAGA
TCGTCTGCGAAAGTTATAAACAAGATGAATGACCAACTTCTAGCAACATTTTCTAGGAGCAAGATTGAAAGAGTGATCAAGCTAATGCATCCTTCCAAGACGCCTAGTCC
TGATGGCTTTCTTGCATTCTTCTTTCAGCAGAACTGGACAAAGAAAAGAGTGGGAAATGGCAAATCCATTGATTTCTTTAATGATCCTTGGATTCCTAAGGAGATTACTT
TCAAGCCATTACAAGAGAGCGAGATTGAAATTCAGGAGAAGATGATGGTGGTTGATTTTATCTTCCCGTTATATGGCTGGGATGTGGATAAAGTTCGTAAATTTGTGACC
GAAGAGGACGCAAAAATTATAGCCTCAATATCTATTAGTAGTTTCAATGACGATGATAAGTGTATATGGCATTATAATTTGAATGGGGCCTATTCTATTAAAAGTGGATA
TAAAGTGGCCATGGTGTTTTCAAAAGGCCTAGTGTCTTCGAGTGTCAACACTCAATGGCAATGGTGGTGTACTCTATGGAAATCTAAAATTCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTACCACTCTCAAAGTTCGAGTCCACTGAGTAAGAATAAGATGGTGGTCAATCTTTCAACACCTCAAGATGGACACAAATTGCATATTGGATTTACGGGAACAGATTC
TCCGTTGTCGAATTTCGGCAGTAGGCCAATGGACATATTGTCGACACCATTGGAAACAGTTACAAAGCCTCTCATGGAATGTACGCAGGGATTATATGCAGTTCCGATCG
ACATTAATGGAGCGCCGGTTAATTCTCCATCAGTTACGTCAAGGAAAAATCAGTTGCTTAATCCCCCATTTGTCATTGACTTTCCTGATGTGGTTAACCGGATAGGTCCA
TTCAAACCACCTGCAATTCCCAAACCCAAGATTGAGGTGCAGATCGAGCTAGTAGCAATGAAAGTGACGCAACCAAGACTTACTGATTTGTCTTCGAATCAAGCCCCAGT
TTCAGAGTTTCGCCCATGCACTAAAATGGATTGTTTTGGTTGTAATGGTGGTCTTTGGTTGCTATGGAAAGAGGATGTAGATGTTGGGGTTAGTGCCCTAAAACTCACAG
ATAGTGAATACACTGTGGTGGTGTTCGTGATAATTTCAGCAAAGAAAAGGAATTTTGGGCTGCTGCAATTTTCTGCAAACCTTGAAGAATTTGGCGAAATTCGGTCAAGA
TCGTCTGCGAAAGTTATAAACAAGATGAATGACCAACTTCTAGCAACATTTTCTAGGAGCAAGATTGAAAGAGTGATCAAGCTAATGCATCCTTCCAAGACGCCTAGTCC
TGATGGCTTTCTTGCATTCTTCTTTCAGCAGAACTGGACAAAGAAAAGAGTGGGAAATGGCAAATCCATTGATTTCTTTAATGATCCTTGGATTCCTAAGGAGATTACTT
TCAAGCCATTACAAGAGAGCGAGATTGAAATTCAGGAGAAGATGATGGTGGTTGATTTTATCTTCCCGTTATATGGCTGGGATGTGGATAAAGTTCGTAAATTTGTGACC
GAAGAGGACGCAAAAATTATAGCCTCAATATCTATTAGTAGTTTCAATGACGATGATAAGTGTATATGGCATTATAATTTGAATGGGGCCTATTCTATTAAAAGTGGATA
TAAAGTGGCCATGGTGTTTTCAAAAGGCCTAGTGTCTTCGAGTGTCAACACTCAATGGCAATGGTGGTGTACTCTATGGAAATCTAAAATTCCATAA
Protein sequenceShow/hide protein sequence
MYHSQSSSPLSKNKMVVNLSTPQDGHKLHIGFTGTDSPLSNFGSRPMDILSTPLETVTKPLMECTQGLYAVPIDINGAPVNSPSVTSRKNQLLNPPFVIDFPDVVNRIGP
FKPPAIPKPKIEVQIELVAMKVTQPRLTDLSSNQAPVSEFRPCTKMDCFGCNGGLWLLWKEDVDVGVSALKLTDSEYTVVVFVIISAKKRNFGLLQFSANLEEFGEIRSR
SSAKVINKMNDQLLATFSRSKIERVIKLMHPSKTPSPDGFLAFFFQQNWTKKRVGNGKSIDFFNDPWIPKEITFKPLQESEIEIQEKMMVVDFIFPLYGWDVDKVRKFVT
EEDAKIIASISISSFNDDDKCIWHYNLNGAYSIKSGYKVAMVFSKGLVSSSVNTQWQWWCTLWKSKIP