| GenBank top hits | e value | %identity | Alignment |
|---|
| ABA94593.2 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] | 8.0e-26 | 34.29 | Show/hide |
Query: MSQFRLISLCNVIYKIIAKVLANILKKVLGDIISQTPSAFVSDMLISDNVNLGFECIHTLNSRRKGKTGLGVLKLDMSKTDDRVEWIYLRKVMHKMDLV-
+ +R ISLCNVIYK+++K L N L+ L +++S SAFV + LI+DN + FEC H + + KLD+SK +RV+W +L + MHKM
Subjt: MSQFRLISLCNVIYKIIAKVLANILKKVLGDIISQTPSAFVSDMLISDNVNLGFECIHTLNSRRKGKTGLGVLKLDMSKTDDRVEWIYLRKVMHKMDLV-
Query: -FFKATEGEGSRIKSVLETYEKATA--PLGS--------NPFAKWRSIVWGRKLFKKGMRWRIGNGNRIIIDQDPWIGKNGNNVPIWEKGR---NYIPSV
+ EG K ++ ++ P GS N WR I G +L KKG+ WR+GNG I + +DPW+ ++ + PI KG ++ +
Subjt: -FFKATEGEGSRIKSVLETYEKATA--PLGS--------NPFAKWRSIVWGRKLFKKGMRWRIGNGNRIIIDQDPWIGKNGNNVPIWEKGR---NYIPSV
Query: LVLQGRWKLN
L G W+++
Subjt: LVLQGRWKLN
|
|
| EEC84864.1 hypothetical protein OsI_31997 [Oryza sativa Indica Group] | 2.6e-24 | 31.75 | Show/hide |
Query: MSQFRLISLCNVIYKIIAKVLANILKKVLGDIISQTPSAFVSDMLISDNVNLGFECIHTLNSRRKGKTGLGVLKLDMSKTDDRVEWIYLRKVMHKMDLV-
+ +FR ISLCNVIYKI++K L N L+ +L D+ISQ SAFV +I+DN L FEC H++ + KLD+SK DRV+W +L + M+K+
Subjt: MSQFRLISLCNVIYKIIAKVLANILKKVLGDIISQTPSAFVSDMLISDNVNLGFECIHTLNSRRKGKTGLGVLKLDMSKTDDRVEWIYLRKVMHKMDLV-
Query: --------------FFKATEGEGSRIKS---------VLETYEKATAP----------------------LGSNPFAKWRSIVWGRKLFKKGMRWRIGNG
KA + G K + + P N WR+I +G +L KKG WR+GNG
Subjt: --------------FFKATEGEGSRIKS---------VLETYEKATAP----------------------LGSNPFAKWRSIVWGRKLFKKGMRWRIGNG
Query: NRIIIDQDPWIGKNGNNVPIWEKGR---NYIPSVLVLQGRWKLNTNATWKDN
+ I +DPWI ++ + PI KG ++ +L L G W + KDN
Subjt: NRIIIDQDPWIGKNGNNVPIWEKGR---NYIPSVLVLQGRWKLNTNATWKDN
|
|
| KAA3469681.1 reverse transcriptase [Gossypium australe] | 1.8e-25 | 42.93 | Show/hide |
Query: MSQFRLISLCNVIYKIIAKVLANILKKVLGDIISQTPSAFVSDMLISDNVNLGFECIHTLNSRRKGKTGLGVLKLDMSKTDDRVEWIYLRKVMHKMDL--
+SQFR ISLCNVIYK+IAKV+AN L V+ I SAFV LI+DNV L +E +HTL +++ GK GL +KLDMSK DRVEW ++ K +
Subjt: MSQFRLISLCNVIYKIIAKVLANILKKVLGDIISQTPSAFVSDMLISDNVNLGFECIHTLNSRRKGKTGLGVLKLDMSKTDDRVEWIYLRKVMHKMDL--
Query: -----VFFKATEG-------EGSRIKSVLETY----EKATAPLGSNPFAKWRSIVWGRKLFKKGMRWRIGNGNRIIIDQDPWI-GKNGNNV
V A +G + +K + Y A A LG+ P WRS+ G+ L +KGM WR+G G++I I D WI GK + V
Subjt: -----VFFKATEG-------EGSRIKSVLETY----EKATAPLGSNPFAKWRSIVWGRKLFKKGMRWRIGNGNRIIIDQDPWI-GKNGNNV
|
|
| XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia] | 2.1e-26 | 32.04 | Show/hide |
Query: MSQFRLISL----CNVIYKIIAKVLANILKKVLGDIISQTPSAFVSDMLISDNVNLGFECIHTLNSRRKGKTGLGVLKLDMSKTDDRVEWIYLRKVMHKM
M F ISL CNVIYKII+KVLAN LK+VL ++IS T SAFV LI+DN +GFECIH+L R KGK G LKLDM K DRVEW YLR V
Subjt: MSQFRLISL----CNVIYKIIAKVLANILKKVLGDIISQTPSAFVSDMLISDNVNLGFECIHTLNSRRKGKTGLGVLKLDMSKTDDRVEWIYLRKVMHKM
Query: DLVFFKATE-----------------GEGSRIKSVLETYEKAT---------------------------------------------------------
+F + G+ IK+V + T
Subjt: DLVFFKATE-----------------GEGSRIKSVLETYEKAT---------------------------------------------------------
Query: ------------------------------------APLGSNPFAKWRSIVWGRKLFKKGMRWRIGNGNRIIIDQDPWIGKNGNNVPIWE--KGRNY-IP
A LG+ P WRSI+WGR LFKKG RW++GNG I + DPW+ ++GN P++ RN+ +
Subjt: ------------------------------------APLGSNPFAKWRSIVWGRKLFKKGMRWRIGNGNRIIIDQDPWIGKNGNNVPIWE--KGRNY-IP
Query: SVLVLQGRW
++ +GRW
Subjt: SVLVLQGRW
|
|
| XP_030958840.1 uncharacterized protein LOC115980760 [Quercus lobata] | 8.0e-26 | 44.31 | Show/hide |
Query: MSQFRLISLCNVIYKIIAKVLANILKKVLGDIISQTPSAFVSDMLISDNVNLGFECIHTLNSRRKGKTGLGVLKLDMSKTDDRVEWIYLRKVMHKMDLV-
+S++R ISLCNV+YKI +KVLAN LKK + ++I++ SAF + LISDNV + FE +H + + GKTG +KLDMSK DRVEW YL+K+M M
Subjt: MSQFRLISLCNVIYKIIAKVLANILKKVLGDIISQTPSAFVSDMLISDNVNLGFECIHTLNSRRKGKTGLGVLKLDMSKTDDRVEWIYLRKVMHKMDLV-
Query: -FFKATEGEGSRIKSVLETYEKATAPLGSNPFAKWRSIVWGRKLFKKGMRWRIGNGNRIIIDQDPWI
FKA S +E E T W+SI+ GR++ K G R+++GNG I I Q W+
Subjt: -FFKATEGEGSRIKSVLETYEKATAPLGSNPFAKWRSIVWGRKLFKKGMRWRIGNGNRIIIDQDPWI
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A9DL65 Reverse transcriptase domain-containing protein | 1.2e-24 | 37.78 | Show/hide |
Query: MSQFRLISLCNVIYKIIAKVLANILKKVLGDIISQTPSAFVSDMLISDNVNLGFECIHTLNSRRKGKTGLGVLKLDMSKTDDRVEWIYLRKVMHKMDL--
M+ FR ISLCNVIYKII+KVLAN LK VL +IIS+ AFV LI+DNV + +E H++ +RRKG+ GL +KLDM+K DRVEW +L +M K+
Subjt: MSQFRLISLCNVIYKIIAKVLANILKKVLGDIISQTPSAFVSDMLISDNVNLGFECIHTLNSRRKGKTGLGVLKLDMSKTDDRVEWIYLRKVMHKMDL--
Query: ----------------VFFKATEGEGSRIK----------------------SVLETYEKATAPL-------GSNPFAKWRSIVWGRKLFKKGMRWRIGN
V+F T + I S L +Y +A L GS+ W+SI+ GR K G WRIGN
Subjt: ----------------VFFKATEGEGSRIK----------------------SVLETYEKATAPL-------GSNPFAKWRSIVWGRKLFKKGMRWRIGN
Query: GNRIIIDQDPWIGKNGNNVPIWEKG
G+ + I D WI + N + +G
Subjt: GNRIIIDQDPWIGKNGNNVPIWEKG
|
|
| A0A5B6VKR7 Reverse transcriptase | 8.6e-26 | 42.93 | Show/hide |
Query: MSQFRLISLCNVIYKIIAKVLANILKKVLGDIISQTPSAFVSDMLISDNVNLGFECIHTLNSRRKGKTGLGVLKLDMSKTDDRVEWIYLRKVMHKMDL--
+SQFR ISLCNVIYK+IAKV+AN L V+ I SAFV LI+DNV L +E +HTL +++ GK GL +KLDMSK DRVEW ++ K +
Subjt: MSQFRLISLCNVIYKIIAKVLANILKKVLGDIISQTPSAFVSDMLISDNVNLGFECIHTLNSRRKGKTGLGVLKLDMSKTDDRVEWIYLRKVMHKMDL--
Query: -----VFFKATEG-------EGSRIKSVLETY----EKATAPLGSNPFAKWRSIVWGRKLFKKGMRWRIGNGNRIIIDQDPWI-GKNGNNV
V A +G + +K + Y A A LG+ P WRS+ G+ L +KGM WR+G G++I I D WI GK + V
Subjt: -----VFFKATEG-------EGSRIKSVLETY----EKATAPLGSNPFAKWRSIVWGRKLFKKGMRWRIGNGNRIIIDQDPWI-GKNGNNV
|
|
| A0A6J1DRA0 uncharacterized protein LOC111022423 | 1.0e-26 | 32.04 | Show/hide |
Query: MSQFRLISL----CNVIYKIIAKVLANILKKVLGDIISQTPSAFVSDMLISDNVNLGFECIHTLNSRRKGKTGLGVLKLDMSKTDDRVEWIYLRKVMHKM
M F ISL CNVIYKII+KVLAN LK+VL ++IS T SAFV LI+DN +GFECIH+L R KGK G LKLDM K DRVEW YLR V
Subjt: MSQFRLISL----CNVIYKIIAKVLANILKKVLGDIISQTPSAFVSDMLISDNVNLGFECIHTLNSRRKGKTGLGVLKLDMSKTDDRVEWIYLRKVMHKM
Query: DLVFFKATE-----------------GEGSRIKSVLETYEKAT---------------------------------------------------------
+F + G+ IK+V + T
Subjt: DLVFFKATE-----------------GEGSRIKSVLETYEKAT---------------------------------------------------------
Query: ------------------------------------APLGSNPFAKWRSIVWGRKLFKKGMRWRIGNGNRIIIDQDPWIGKNGNNVPIWE--KGRNY-IP
A LG+ P WRSI+WGR LFKKG RW++GNG I + DPW+ ++GN P++ RN+ +
Subjt: ------------------------------------APLGSNPFAKWRSIVWGRKLFKKGMRWRIGNGNRIIIDQDPWIGKNGNNVPIWE--KGRNY-IP
Query: SVLVLQGRW
++ +GRW
Subjt: SVLVLQGRW
|
|
| B8BDD1 Post-SET domain-containing protein | 1.2e-24 | 31.75 | Show/hide |
Query: MSQFRLISLCNVIYKIIAKVLANILKKVLGDIISQTPSAFVSDMLISDNVNLGFECIHTLNSRRKGKTGLGVLKLDMSKTDDRVEWIYLRKVMHKMDLV-
+ +FR ISLCNVIYKI++K L N L+ +L D+ISQ SAFV +I+DN L FEC H++ + KLD+SK DRV+W +L + M+K+
Subjt: MSQFRLISLCNVIYKIIAKVLANILKKVLGDIISQTPSAFVSDMLISDNVNLGFECIHTLNSRRKGKTGLGVLKLDMSKTDDRVEWIYLRKVMHKMDLV-
Query: --------------FFKATEGEGSRIKS---------VLETYEKATAP----------------------LGSNPFAKWRSIVWGRKLFKKGMRWRIGNG
KA + G K + + P N WR+I +G +L KKG WR+GNG
Subjt: --------------FFKATEGEGSRIKS---------VLETYEKATAP----------------------LGSNPFAKWRSIVWGRKLFKKGMRWRIGNG
Query: NRIIIDQDPWIGKNGNNVPIWEKGR---NYIPSVLVLQGRWKLNTNATWKDN
+ I +DPWI ++ + PI KG ++ +L L G W + KDN
Subjt: NRIIIDQDPWIGKNGNNVPIWEKGR---NYIPSVLVLQGRWKLNTNATWKDN
|
|
| Q2R1K6 Retrotransposon protein, putative, unclassified | 3.9e-26 | 34.29 | Show/hide |
Query: MSQFRLISLCNVIYKIIAKVLANILKKVLGDIISQTPSAFVSDMLISDNVNLGFECIHTLNSRRKGKTGLGVLKLDMSKTDDRVEWIYLRKVMHKMDLV-
+ +R ISLCNVIYK+++K L N L+ L +++S SAFV + LI+DN + FEC H + + KLD+SK +RV+W +L + MHKM
Subjt: MSQFRLISLCNVIYKIIAKVLANILKKVLGDIISQTPSAFVSDMLISDNVNLGFECIHTLNSRRKGKTGLGVLKLDMSKTDDRVEWIYLRKVMHKMDLV-
Query: -FFKATEGEGSRIKSVLETYEKATA--PLGS--------NPFAKWRSIVWGRKLFKKGMRWRIGNGNRIIIDQDPWIGKNGNNVPIWEKGR---NYIPSV
+ EG K ++ ++ P GS N WR I G +L KKG+ WR+GNG I + +DPW+ ++ + PI KG ++ +
Subjt: -FFKATEGEGSRIKSVLETYEKATA--PLGS--------NPFAKWRSIVWGRKLFKKGMRWRIGNGNRIIIDQDPWIGKNGNNVPIWEKGR---NYIPSV
Query: LVLQGRWKLN
L G W+++
Subjt: LVLQGRWKLN
|
|
