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Lag0025677 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025677
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr10:17626111..17628489
RNA-Seq ExpressionLag0025677
SyntenyLag0025677
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EPS63383.1 hypothetical protein M569_11401 [Genlisea aurea]2.5e-0939.08Show/hide
Query:  DGVQ-SSWKDPWIPREGSCKPLSSNPH-AQQLLVAHVINPHGV-WNEALVRSLFLENDVTVVLNIPLGSVARMDEVIWHFDPKGLFS
        DGV  + W  PW+PR GS KP+  NP  +  L V+ +I+P    WN + ++ +FL  D   +L+IPLGS    D +IWH+  +G ++
Subjt:  DGVQ-SSWKDPWIPREGSCKPLSSNPH-AQQLLVAHVINPHGV-WNEALVRSLFLENDVTVVLNIPLGSVARMDEVIWHFDPKGLFS

GER25691.1 ribonuclease H-like superfamily protein, partial [Striga asiatica]6.5e-1036.19Show/hide
Query:  WRSWKRSVTIKPRPYGISRLDGVQSS-WKDPWIPREGSCKPLSSNPHAQQLLVAHVINPHGVWNEALVRSLFLENDVTVVLNIPLGSVARMDEVIWHFDP
        W+ W ++     R   I   DG  +S W DPWIP     K            V+ ++   G WN+ L+  +F E DVT ++ I      R DEV+WHFDP
Subjt:  WRSWKRSVTIKPRPYGISRLDGVQSS-WKDPWIPREGSCKPLSSNPHAQQLLVAHVINPHGVWNEALVRSLFLENDVTVVLNIPLGSVARMDEVIWHFDP

Query:  KGLFS
        KG FS
Subjt:  KGLFS

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]3.2e-0933.02Show/hide
Query:  WRS--WKRSVTIKPRPYGISRLDGVQSSWKDPWIPREGSCKPLSSNPHAQQLLVAHVINPHGVWNEALVRSLFLENDVTVVLNIPLGSVARMDEVIWHFD
        WRS  W R +  K   + +     +  S  DPW+PR+G+  P+ ++ H +   VA ++   G W+E  VR  F+ ++  ++L  PL S  + DE+IW  D
Subjt:  WRS--WKRSVTIKPRPYGISRLDGVQSSWKDPWIPREGSCKPLSSNPHAQQLLVAHVINPHGVWNEALVRSLFLENDVTVVLNIPLGSVARMDEVIWHFD

Query:  PKGLFS
          G+FS
Subjt:  PKGLFS

XP_024038343.1 uncharacterized protein LOC112097373 [Citrus clementina]4.2e-0932.79Show/hide
Query:  HDKVLVGIFGDGKEIHWRS--WKRSVTIKPRPYGISRLDGVQSSWKDPWIPREGSCKPLSSNPHAQQLLVAHVINPHGVWNEALVRSLFLENDVTVVLNI
        H   +    G      WRS  W R V  K   + I     +    K+ W+PR  + KP+S        LVA +IN    WNE L+   F + D   ++ I
Subjt:  HDKVLVGIFGDGKEIHWRS--WKRSVTIKPRPYGISRLDGVQSSWKDPWIPREGSCKPLSSNPHAQQLLVAHVINPHGVWNEALVRSLFLENDVTVVLNI

Query:  PLGSVARMDEVIWHFDPKGLFS
         L      DEVIWH+D KG +S
Subjt:  PLGSVARMDEVIWHFDPKGLFS

XP_038708495.1 uncharacterized protein LOC120003549 [Tripterygium wilfordii]5.5e-0942.68Show/hide
Query:  SSWKDPWIPREGSCKPLSS-NPHAQQLLVAHVIN-PHGVWNEALVRSLFLENDVTVVLNIPLGSVARMDEVIWHFDPKGLFS
        S W D WIPR  +  P++  NPH   L V H+IN   G W+E  +R + L  DV  +L IPLG V   D   W+F+PKG+++
Subjt:  SSWKDPWIPREGSCKPLSS-NPHAQQLLVAHVIN-PHGVWNEALVRSLFLENDVTVVLNIPLGSVARMDEVIWHFDPKGLFS

TrEMBL top hitse value%identityAlignment
A0A5A7NZJ7 Ribonuclease H-like superfamily protein (Fragment)3.1e-1036.19Show/hide
Query:  WRSWKRSVTIKPRPYGISRLDGVQSS-WKDPWIPREGSCKPLSSNPHAQQLLVAHVINPHGVWNEALVRSLFLENDVTVVLNIPLGSVARMDEVIWHFDP
        W+ W ++     R   I   DG  +S W DPWIP     K            V+ ++   G WN+ L+  +F E DVT ++ I      R DEV+WHFDP
Subjt:  WRSWKRSVTIKPRPYGISRLDGVQSS-WKDPWIPREGSCKPLSSNPHAQQLLVAHVINPHGVWNEALVRSLFLENDVTVVLNIPLGSVARMDEVIWHFDP

Query:  KGLFS
        KG FS
Subjt:  KGLFS

A0A5A7PYW7 RNA-directed DNA polymerase (Reversetranscriptase)-related family protein1.0e-0832.71Show/hide
Query:  WRSWKRSVTIKPRPYGISRLDGVQSS-WKDPWIPREGSCKPLSSNPHAQQLLVAH-VINPHG-VWNEALVRSLFLENDVTVVLNIPLGSVARMDEVIWHF
        W+SW  +  +  +   I   DG  +  W +PWIP   + + +    +   L   H ++  +G  WN  L+RS+F E D+  +LN PL +    D+V+WH+
Subjt:  WRSWKRSVTIKPRPYGISRLDGVQSS-WKDPWIPREGSCKPLSSNPHAQQLLVAH-VINPHG-VWNEALVRSLFLENDVTVVLNIPLGSVARMDEVIWHF

Query:  DPKGLFS
        D KG FS
Subjt:  DPKGLFS

A0A5C7H1A9 zf-RVT domain-containing protein1.0e-0839.74Show/hide
Query:  WKDPWIPREGSCKPLSSNPHAQQLLVAHVINPHGVWNEALVRSLFLENDVTVVLNIPLGSVARMDEVIWHFDPKGLFS
        +KD W+PR G  +  S     +  +V+ ++   G W++ LVRS FL ++V ++L+IPL    R D  +WHFD KG FS
Subjt:  WKDPWIPREGSCKPLSSNPHAQQLLVAHVINPHGVWNEALVRSLFLENDVTVVLNIPLGSVARMDEVIWHFDPKGLFS

A0A6J1BRN0 uncharacterized protein LOC1110047871.7e-0833.65Show/hide
Query:  WKRSVTIKPRPYGISRLDGVQSS---WKDPWIPREGSCKPLSSNPHAQQLLVAHVINPHGVWNEALVRSLFLENDVTVVLNIPLGSVARMDEVIWHFDPK
        W R + IK    G+    G  S+   + DPWIPR  S +P+++      + VA +INP+G W+  L+  +F E D  ++L++P+     +D  IWHFD +
Subjt:  WKRSVTIKPRPYGISRLDGVQSS---WKDPWIPREGSCKPLSSNPHAQQLLVAHVINPHGVWNEALVRSLFLENDVTVVLNIPLGSVARMDEVIWHFDPK

Query:  GLFS
        G ++
Subjt:  GLFS

A0A6J1DRA0 uncharacterized protein LOC1110224231.6e-0933.02Show/hide
Query:  WRS--WKRSVTIKPRPYGISRLDGVQSSWKDPWIPREGSCKPLSSNPHAQQLLVAHVINPHGVWNEALVRSLFLENDVTVVLNIPLGSVARMDEVIWHFD
        WRS  W R +  K   + +     +  S  DPW+PR+G+  P+ ++ H +   VA ++   G W+E  VR  F+ ++  ++L  PL S  + DE+IW  D
Subjt:  WRS--WKRSVTIKPRPYGISRLDGVQSSWKDPWIPREGSCKPLSSNPHAQQLLVAHVINPHGVWNEALVRSLFLENDVTVVLNIPLGSVARMDEVIWHFD

Query:  PKGLFS
          G+FS
Subjt:  PKGLFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGATAAGGTTTTGGTGGGGATCTTCGGAGACGGGAAGGAAATCCATTGGCGAAGTTGGAAAAGAAGTGTCACCATAAAACCAAGGCCGTATGGGATTTCGAGACT
TGACGGTGTTCAATCAAGCTGGAAAGATCCATGGATTCCAAGGGAAGGATCTTGTAAACCACTTTCCTCCAATCCTCATGCCCAACAATTATTGGTGGCTCATGTTATCA
ACCCTCATGGAGTATGGAATGAGGCTCTAGTTCGATCTTTGTTCCTAGAAAACGATGTTACGGTCGTTCTTAATATTCCTCTAGGATCAGTCGCTAGAATGGATGAAGTT
ATATGGCATTTTGATCCCAAAGGCTTATTTTCGGAGGGACTGGAAGATGACAGACTATTGGGAGCAAATTTGGAAGGGGACAAACGGCGACAAGATGGAGGAGGAAAACT
TGAAGCTCAGTTTGATCATATGGTGGAAATACGGACTTATCGAAACAACATCTTACACAATAGGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATGATAAGGTTTTGGTGGGGATCTTCGGAGACGGGAAGGAAATCCATTGGCGAAGTTGGAAAAGAAGTGTCACCATAAAACCAAGGCCGTATGGGATTTCGAGACT
TGACGGTGTTCAATCAAGCTGGAAAGATCCATGGATTCCAAGGGAAGGATCTTGTAAACCACTTTCCTCCAATCCTCATGCCCAACAATTATTGGTGGCTCATGTTATCA
ACCCTCATGGAGTATGGAATGAGGCTCTAGTTCGATCTTTGTTCCTAGAAAACGATGTTACGGTCGTTCTTAATATTCCTCTAGGATCAGTCGCTAGAATGGATGAAGTT
ATATGGCATTTTGATCCCAAAGGCTTATTTTCGGAGGGACTGGAAGATGACAGACTATTGGGAGCAAATTTGGAAGGGGACAAACGGCGACAAGATGGAGGAGGAAAACT
TGAAGCTCAGTTTGATCATATGGTGGAAATACGGACTTATCGAAACAACATCTTACACAATAGGAAGTAA
Protein sequenceShow/hide protein sequence
MHDKVLVGIFGDGKEIHWRSWKRSVTIKPRPYGISRLDGVQSSWKDPWIPREGSCKPLSSNPHAQQLLVAHVINPHGVWNEALVRSLFLENDVTVVLNIPLGSVARMDEV
IWHFDPKGLFSEGLEDDRLLGANLEGDKRRQDGGGKLEAQFDHMVEIRTYRNNILHNRK