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Lag0025697 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025697
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr10:18045579..18051230
RNA-Seq ExpressionLag0025697
SyntenyLag0025697
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026042.1 gag/pol protein [Cucumis melo var. makuwa]5.3e-1150Show/hide
Query:  LVLRHGILLSKELCPETPQDVEDLRHKPYA--------------------IGIVRYMDIDFKTDKDLRKSTSVSVVTLYDGAIPLR
        L  RHG+ LSKE CP+TPQ+VED+R  PYA                    +GIVRY D DF TDKD +KSTS SV TL  GA+  R
Subjt:  LVLRHGILLSKELCPETPQDVEDLRHKPYA--------------------IGIVRYMDIDFKTDKDLRKSTSVSVVTLYDGAIPLR

KAA0051845.1 gag/pol protein [Cucumis melo var. makuwa]3.1e-1150Show/hide
Query:  LVLRHGILLSKELCPETPQDVEDLRHKP--------------------YAIGIVRYMDIDFKTDKDLRKSTSVSVVTLYDGAIPLR
        L  RHG+ L KE CP TPQDVE++RH P                    YA+GIVRY D DF+TD+D RKSTS SV TL  GA+  R
Subjt:  LVLRHGILLSKELCPETPQDVEDLRHKP--------------------YAIGIVRYMDIDFKTDKDLRKSTSVSVVTLYDGAIPLR

KAA0062799.1 gag/pol protein [Cucumis melo var. makuwa]2.6e-1047.13Show/hide
Query:  SLVLRHGILLSKELCPETPQDVEDLRHKPYAIGI--------------------VRYMDIDFKTDKDLRKSTSVSVVTLYDGAIPLR
        S V  HG+ LSKE CP+TPQDVE++RH PYA  +                     RY+D DF+TD+D RKSTS SV TL  GA+  R
Subjt:  SLVLRHGILLSKELCPETPQDVEDLRHKPYAIGI--------------------VRYMDIDFKTDKDLRKSTSVSVVTLYDGAIPLR

TYK15863.1 gag/pol protein [Cucumis melo var. makuwa]8.7e-1446.23Show/hide
Query:  LVLRHGILLSKELCPETPQDVEDLRHKP--------------------YAIGIVRYMDIDFKTDKDLRKSTSVSVVTLYDGAIPLREHTSAYPNRGK---
        L  RHG+ LSKE CP+TPQ+ ED+R  P                    YA+GIVRY D DF+TDKD RKSTSVSV TL DGA+   + + +Y  +GK   
Subjt:  LVLRHGILLSKELCPETPQDVEDLRHKP--------------------YAIGIVRYMDIDFKTDKDLRKSTSVSVVTLYDGAIPLREHTSAYPNRGK---

Query:  SEFHLV
         ++HL+
Subjt:  SEFHLV

TYK21399.1 gag/pol protein [Cucumis melo var. makuwa]3.1e-1150Show/hide
Query:  LVLRHGILLSKELCPETPQDVEDLRHKP--------------------YAIGIVRYMDIDFKTDKDLRKSTSVSVVTLYDGAIPLR
        L  RHG+ L KE CP TPQDVE++RH P                    YA+GIVRY D DF+TD+D RKSTS SV TL  GA+  R
Subjt:  LVLRHGILLSKELCPETPQDVEDLRHKP--------------------YAIGIVRYMDIDFKTDKDLRKSTSVSVVTLYDGAIPLR

TrEMBL top hitse value%identityAlignment
A0A5A7SLM0 Gag/pol protein2.5e-1150Show/hide
Query:  LVLRHGILLSKELCPETPQDVEDLRHKPYA--------------------IGIVRYMDIDFKTDKDLRKSTSVSVVTLYDGAIPLR
        L  RHG+ LSKE CP+TPQ+VED+R  PYA                    +GIVRY D DF TDKD +KSTS SV TL  GA+  R
Subjt:  LVLRHGILLSKELCPETPQDVEDLRHKPYA--------------------IGIVRYMDIDFKTDKDLRKSTSVSVVTLYDGAIPLR

A0A5A7UDR8 Gag/pol protein1.5e-1150Show/hide
Query:  LVLRHGILLSKELCPETPQDVEDLRHKP--------------------YAIGIVRYMDIDFKTDKDLRKSTSVSVVTLYDGAIPLR
        L  RHG+ L KE CP TPQDVE++RH P                    YA+GIVRY D DF+TD+D RKSTS SV TL  GA+  R
Subjt:  LVLRHGILLSKELCPETPQDVEDLRHKP--------------------YAIGIVRYMDIDFKTDKDLRKSTSVSVVTLYDGAIPLR

A0A5D3BE74 Gag/pol protein1.3e-1047.13Show/hide
Query:  SLVLRHGILLSKELCPETPQDVEDLRHKPYAIGI--------------------VRYMDIDFKTDKDLRKSTSVSVVTLYDGAIPLR
        S V  HG+ LSKE CP+TPQDVE++RH PYA  +                     RY+D DF+TD+D RKSTS SV TL  GA+  R
Subjt:  SLVLRHGILLSKELCPETPQDVEDLRHKPYAIGI--------------------VRYMDIDFKTDKDLRKSTSVSVVTLYDGAIPLR

A0A5D3CVH7 Gag/pol protein4.2e-1446.23Show/hide
Query:  LVLRHGILLSKELCPETPQDVEDLRHKP--------------------YAIGIVRYMDIDFKTDKDLRKSTSVSVVTLYDGAIPLREHTSAYPNRGK---
        L  RHG+ LSKE CP+TPQ+ ED+R  P                    YA+GIVRY D DF+TDKD RKSTSVSV TL DGA+   + + +Y  +GK   
Subjt:  LVLRHGILLSKELCPETPQDVEDLRHKP--------------------YAIGIVRYMDIDFKTDKDLRKSTSVSVVTLYDGAIPLREHTSAYPNRGK---

Query:  SEFHLV
         ++HL+
Subjt:  SEFHLV

A0A5D3DDM9 Gag/pol protein1.5e-1150Show/hide
Query:  LVLRHGILLSKELCPETPQDVEDLRHKP--------------------YAIGIVRYMDIDFKTDKDLRKSTSVSVVTLYDGAIPLR
        L  RHG+ L KE CP TPQDVE++RH P                    YA+GIVRY D DF+TD+D RKSTS SV TL  GA+  R
Subjt:  LVLRHGILLSKELCPETPQDVEDLRHKP--------------------YAIGIVRYMDIDFKTDKDLRKSTSVSVVTLYDGAIPLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATCGACCAATGCAGAAATGGAGTTGATATTTGTTTAGCTTTACTGGAAAGTAACCTAAATGTTTTAAGACTAATCAAAAGTAAAGCAATCATGAACACTGGGTT
GTTTAAGACTGCTACTACTACTCAATGTGAAAAAAGGCAAAGGATTTCTCCTAAAGGAAAATACCTTTCTTTGGTTTTAAGGCATGGAATTCTTTTGTCTAAGGAACTGT
GTCCTGAGACACCTCAAGATGTTGAGGACTTGAGACATAAGCCCTATGCAATAGGGATTGTCAGATACATGGACATAGATTTTAAGACTGATAAGGATTTGAGGAAATCT
ACATCAGTATCTGTGGTCACTCTTTACGATGGAGCTATACCCTTAAGGGAACACACGTCTGCTTACCCCAATAGGGGAAAGAGTGAATTCCATCTTGTAATGTTATGTTC
CAAGCCCCCACTTGGTCTTGCCCCTGAAATGGATACCCCCACTCGCATGTCTCCTACATGGATGCTTTGGATCATTGCATCTGTATCGAATACAAAGTGGGTCGTATCAC
ATGGTGTTACCAGGATAAGGGATAAGGCTGGGTACCTTAATCCTAGGAAAGCTATGAGGCACAACCCACTTTGTTTAAGTACAAACGACGTGATCCTGGATCGTTCATGT
TGTGAGTGGGGGCGTCCTATGCAAATGAGTTTGCATAAGACCAGGACCGAGAAAAGTCACTCTTGCTTTATAACGCCGTTTACTGACAAGATTGGCTATTTCAATGCGAT
GACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATATCGACCAATGCAGAAATGGAGTTGATATTTGTTTAGCTTTACTGGAAAGTAACCTAAATGTTTTAAGACTAATCAAAAGTAAAGCAATCATGAACACTGGGTT
GTTTAAGACTGCTACTACTACTCAATGTGAAAAAAGGCAAAGGATTTCTCCTAAAGGAAAATACCTTTCTTTGGTTTTAAGGCATGGAATTCTTTTGTCTAAGGAACTGT
GTCCTGAGACACCTCAAGATGTTGAGGACTTGAGACATAAGCCCTATGCAATAGGGATTGTCAGATACATGGACATAGATTTTAAGACTGATAAGGATTTGAGGAAATCT
ACATCAGTATCTGTGGTCACTCTTTACGATGGAGCTATACCCTTAAGGGAACACACGTCTGCTTACCCCAATAGGGGAAAGAGTGAATTCCATCTTGTAATGTTATGTTC
CAAGCCCCCACTTGGTCTTGCCCCTGAAATGGATACCCCCACTCGCATGTCTCCTACATGGATGCTTTGGATCATTGCATCTGTATCGAATACAAAGTGGGTCGTATCAC
ATGGTGTTACCAGGATAAGGGATAAGGCTGGGTACCTTAATCCTAGGAAAGCTATGAGGCACAACCCACTTTGTTTAAGTACAAACGACGTGATCCTGGATCGTTCATGT
TGTGAGTGGGGGCGTCCTATGCAAATGAGTTTGCATAAGACCAGGACCGAGAAAAGTCACTCTTGCTTTATAACGCCGTTTACTGACAAGATTGGCTATTTCAATGCGAT
GACCTAG
Protein sequenceShow/hide protein sequence
MDIDQCRNGVDICLALLESNLNVLRLIKSKAIMNTGLFKTATTTQCEKRQRISPKGKYLSLVLRHGILLSKELCPETPQDVEDLRHKPYAIGIVRYMDIDFKTDKDLRKS
TSVSVVTLYDGAIPLREHTSAYPNRGKSEFHLVMLCSKPPLGLAPEMDTPTRMSPTWMLWIIASVSNTKWVVSHGVTRIRDKAGYLNPRKAMRHNPLCLSTNDVILDRSC
CEWGRPMQMSLHKTRTEKSHSCFITPFTDKIGYFNAMT