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Lag0025719 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025719
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein CLAVATA 3
Genome locationchr10:18390920..18391417
RNA-Seq ExpressionLag0025719
SyntenyLag0025719
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054350.1 protein CLAVATA 3 [Cucumis melo var. makuwa]3.4e-0970.37Show/hide
Query:  SRKMLRQMNKDMEEQVDSGRRRWPPV-EGDQLRRVPSGPDPLHHNGGSPKKPRT
        SRKM+ +M K+MEE  D G +RW  + E +QLRRVPSGPDPLHHNGGSPKKPRT
Subjt:  SRKMLRQMNKDMEEQVDSGRRRWPPV-EGDQLRRVPSGPDPLHHNGGSPKKPRT

KAE8652825.1 hypothetical protein Csa_022700, partial [Cucumis sativus]6.4e-1655.67Show/hide
Query:  LLLLLLLFLLTHTLSS---DYCTWTAGRCAFISATPPLFPPSSKSRKMLRQMNKDMEEQVDSGRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRT
        L LLLL F L H L S   +YC W  GRC ++S    +      SRKML +M K+MEE    G+R     E +QLRRVPSGPDPLHHNGGSPKKPRT
Subjt:  LLLLLLLFLLTHTLSS---DYCTWTAGRCAFISATPPLFPPSSKSRKMLRQMNKDMEEQVDSGRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRT

KAE8692998.1 Protein CLAVATA 3 [Hibiscus syriacus]8.7e-0542.27Show/hide
Query:  SLLLLLLLFLLTHTLSSDYCTWTAGRCAFISATPPLFPPSSKSRKMLRQMNKDMEEQVDSGRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRTTP
        + +LLL+ FL+ H           G C  +S     F   S++RKML Q  +D      +G R       +  R VPSGPDPLHHNGGSPKKPRT P
Subjt:  SLLLLLLLFLLTHTLSSDYCTWTAGRCAFISATPPLFPPSSKSRKMLRQMNKDMEEQVDSGRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRTTP

KAG6583691.1 hypothetical protein SDJN03_19623, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1559.22Show/hide
Query:  MAASKFLFSLLLLLLLFLLTHTLSSDYCTWTAGRCAFISATPPLFPPSSKSRKMLRQMNKDMEEQVDSGRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKK
        MA S  +FS  LLLL+F L+H  SS     T  R   +  TPPL   + ++RKMLR+M K++E  VD G RR P VE DQLRRVPSGPDPLHHNGGSPKK
Subjt:  MAASKFLFSLLLLLLLFLLTHTLSSDYCTWTAGRCAFISATPPLFPPSSKSRKMLRQMNKDMEEQVDSGRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKK

Query:  PRT
        PRT
Subjt:  PRT

XP_038877536.1 protein CLAVATA 3 [Benincasa hispida]1.8e-1855.24Show/hide
Query:  AASKFLFSLLLLLLLFLLTHTLSSD-YCTWTAG--RCAFISATPPLFPPSSKSRKMLRQMNKDMEEQVDSGRRRWPPVEGDQLRRVPSGPDPLHHNGGSP
        ++SKF+ S     LL L+    SSD YC W     RC  +S  PP+      SRKML++M K+MEE VD  +R WP  E +QLRRVPSGPDPLHHNGGSP
Subjt:  AASKFLFSLLLLLLLFLLTHTLSSD-YCTWTAG--RCAFISATPPLFPPSSKSRKMLRQMNKDMEEQVDSGRRRWPPVEGDQLRRVPSGPDPLHHNGGSP

Query:  KKPRT
        KKPRT
Subjt:  KKPRT

TrEMBL top hitse value%identityAlignment
A0A5A7UGG1 Protein CLAVATA 31.7e-0970.37Show/hide
Query:  SRKMLRQMNKDMEEQVDSGRRRWPPV-EGDQLRRVPSGPDPLHHNGGSPKKPRT
        SRKM+ +M K+MEE  D G +RW  + E +QLRRVPSGPDPLHHNGGSPKKPRT
Subjt:  SRKMLRQMNKDMEEQVDSGRRRWPPV-EGDQLRRVPSGPDPLHHNGGSPKKPRT

A0A5N5FTH9 Protein CLAVATA 3-like4.2e-0550.91Show/hide
Query:  SRKMLRQMNKDMEEQVDSGRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRTTP
        SRK+L+    D ++ + +G+ +     G +LR+VPSGPDPLHHNG +PKKPRT P
Subjt:  SRKMLRQMNKDMEEQVDSGRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRTTP

A0A5N5JS29 Uncharacterized protein1.2e-0441.59Show/hide
Query:  MAASKFLFSLLLLLLLFL----------LTHTLSSDYCTWTAGRCAFISATPPLFPPSSKSRKMLRQMNKDMEEQVDSGRRRWPPVEGDQLRRVPSGPDP
        MA     +SL+L+L+LF           LT  LS   C+ T  RC F  A  P+     KSRK+L  +   +     S       +E  +LR  PSGPDP
Subjt:  MAASKFLFSLLLLLLLFL----------LTHTLSSDYCTWTAGRCAFISATPPLFPPSSKSRKMLRQMNKDMEEQVDSGRRRWPPVEGDQLRRVPSGPDP

Query:  LHHNGGSPKKPRT
        LHHNGGSPKKPRT
Subjt:  LHHNGGSPKKPRT

A0A6A2ZM99 Protein CLAVATA 34.2e-0542.27Show/hide
Query:  SLLLLLLLFLLTHTLSSDYCTWTAGRCAFISATPPLFPPSSKSRKMLRQMNKDMEEQVDSGRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRTTP
        + +LLL+ FL+ H           G C  +S     F   S++RKML Q  +D      +G R       +  R VPSGPDPLHHNGGSPKKPRT P
Subjt:  SLLLLLLLFLLTHTLSSDYCTWTAGRCAFISATPPLFPPSSKSRKMLRQMNKDMEEQVDSGRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRTTP

A0A6N2MKH7 Uncharacterized protein3.8e-0642.72Show/hide
Query:  MAASKFLFSLLLLLLLFLLTHTLSSDYCTWTAGRCAFISATPPLFPPSSKSRKMLRQMNKDMEEQVDSGRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKK
        MA     +SL+L+L+LF +     S+ C+ T  RC F  A  P+     KSRK+L  +   +     S       +E  +LR  PSGPDPLHHNGGSPKK
Subjt:  MAASKFLFSLLLLLLLFLLTHTLSSDYCTWTAGRCAFISATPPLFPPSSKSRKMLRQMNKDMEEQVDSGRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKK

Query:  PRT
        PRT
Subjt:  PRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCTCCAAATTCTTGTTTTCCCTTCTCCTTCTCCTTCTCCTTTTCTTGCTCACTCACACTCTTTCTTCTGATTATTGTACGTGGACAGCCGGACGATGCGCTTT
CATTTCCGCTACACCGCCCCTCTTCCCACCCTCGTCTAAGAGCCGCAAGATGCTTCGACAGATGAACAAGGACATGGAAGAACAAGTTGACAGCGGCAGGAGACGGTGGC
CGCCGGTGGAGGGGGACCAGCTGCGGAGGGTGCCGTCGGGGCCTGACCCATTACACCACAATGGAGGAAGCCCTAAAAAGCCTCGAACCACTCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCTCCAAATTCTTGTTTTCCCTTCTCCTTCTCCTTCTCCTTTTCTTGCTCACTCACACTCTTTCTTCTGATTATTGTACGTGGACAGCCGGACGATGCGCTTT
CATTTCCGCTACACCGCCCCTCTTCCCACCCTCGTCTAAGAGCCGCAAGATGCTTCGACAGATGAACAAGGACATGGAAGAACAAGTTGACAGCGGCAGGAGACGGTGGC
CGCCGGTGGAGGGGGACCAGCTGCGGAGGGTGCCGTCGGGGCCTGACCCATTACACCACAATGGAGGAAGCCCTAAAAAGCCTCGAACCACTCCATGA
Protein sequenceShow/hide protein sequence
MAASKFLFSLLLLLLLFLLTHTLSSDYCTWTAGRCAFISATPPLFPPSSKSRKMLRQMNKDMEEQVDSGRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRTTP