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Lag0025725 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025725
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLEA_2 domain-containing protein
Genome locationchr10:18585392..18586084
RNA-Seq ExpressionLag0025725
SyntenyLag0025725
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR004864 - Late embryogenesis abundant protein, LEA_2 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463664.1 PREDICTED: uncharacterized protein LOC103501757 [Cucumis melo]7.4e-5758.94Show/hide
Query:  PPPPP--PPHYRC--TSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLAISLDNIESSIYYK
        PPP P    H  C  +SPFLR FAAG+ L+L IA V+Y++++L F P+LP  ++ SLQL NFS AA +  + WIVGFS+NNPNKKLAIS  N++SSIYYK
Subjt:  PPPPP--PPHYRC--TSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLAISLDNIESSIYYK

Query:  DKILSQARIHRFAVPRRNSTAVVTPFVADSAADMSVLNDINGDFARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPSSPDGGSGELVGG
        D I++QARI RF +  RNST +V PF+A S  D SVLNDINGD ARG INFTV VLG+  F+  +W+WRGT  + VCSDL+VG S P S  G SG+LVGG
Subjt:  DKILSQARIHRFAVPRRNSTAVVTPFVADSAADMSVLNDINGDFARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPSSPDGGSGELVGG

Query:  SRQCKVR
        S+QC+++
Subjt:  SRQCKVR

XP_018857049.1 uncharacterized protein At1g08160-like [Juglans regia]2.1e-3544.65Show/hide
Query:  PQHQPYPHWIHHPPPPPPPHYRCTSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLAISLDN
        P HQ  P++ ++ P P P     +  F+R F A ++L+  +  V   V +L+  P LPDF+V SL L NFS A+ SL+  W V FSV NPNKKL+IS + 
Subjt:  PQHQPYPHWIHHPPPPPPPHYRCTSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLAISLDN

Query:  IESSIYYKDKILSQARIHRFAVPRRNSTAVVTPF-VADSAADMSVLNDINGDFARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPSSPD
        + SS++YK + +S  R+  F + +RN T +   F  AD+  D  V+NDINGD ARG ++F V V   V F  G WR R    R +C  LAVG+SS SS  
Subjt:  IESSIYYKDKILSQARIHRFAVPRRNSTAVVTPF-VADSAADMSVLNDINGDFARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPSSPD

Query:  GGSGELVGGSRQCKV
         GSG LVGG+R C+V
Subjt:  GGSGELVGGSRQCKV

XP_022957733.1 NDR1/HIN1-like protein 2 [Cucurbita moschata]1.2e-3544.08Show/hide
Query:  PYPHWIHHPPPPPPPHYRCTSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLAISLDNIESS
        PY +  H+  P    H+     FLRA  AGI++I II  V+  + +L+  P LP+F+V S Q+ NFS A+ SLSA W VGFSV NPNKK++IS D ++S+
Subjt:  PYPHWIHHPPPPPPPHYRCTSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLAISLDNIESS

Query:  IYYKDKILSQARIHRFAVPRRNSTAVVTPFVADSA-ADMSVLNDINGDFARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPSSPDGGSG
        ++YK++ILS+ R+  F   +R  T V   F + +A  D S +N+IN D  RGA+ F V +   V F  G WR R    R +C DL+VG+SS +S    SG
Subjt:  IYYKDKILSQARIHRFAVPRRNSTAVVTPFVADSA-ADMSVLNDINGDFARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPSSPDGGSG

Query:  ELVGGSRQCKV
        +L+G SR C+V
Subjt:  ELVGGSRQCKV

XP_022995131.1 NDR1/HIN1-like protein 2 [Cucurbita maxima]4.7e-3542.17Show/hide
Query:  HQPMADTSTHPQ-----HQPYPHWIHHPPPPPPPHYRCTSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGF
        H P +++  H Q       PY +  H+  P    H      FLRA  AGI++I II  V+  + +L+  P LP+F+V S Q+ NFS A+ SLSA W VGF
Subjt:  HQPMADTSTHPQ-----HQPYPHWIHHPPPPPPPHYRCTSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGF

Query:  SVNNPNKKLAISLDNIESSIYYKDKILSQARIHRFAVPRRNSTAVVTPFVADSA-ADMSVLNDINGDFARGAINFTVAVLGHVAFETGVWRWRGTFFRAV
        SV NPNKK++IS D ++S+++YK++ILS+ R+  F   +R  T V   F + +A  D S +NDIN D  RGA+ F V +   V F  G WR R    R +
Subjt:  SVNNPNKKLAISLDNIESSIYYKDKILSQARIHRFAVPRRNSTAVVTPFVADSA-ADMSVLNDINGDFARGAINFTVAVLGHVAFETGVWRWRGTFFRAV

Query:  CSDLAVGISSPSSPDGGSGELVGGSRQCKV
        C DL+VG+S  +S    SG+L+G SR C+V
Subjt:  CSDLAVGISSPSSPDGGSGELVGGSRQCKV

XP_023532895.1 NDR1/HIN1-like protein 2 [Cucurbita pepo subsp. pepo]2.1e-3544.08Show/hide
Query:  PYPHWIHHPPPPPPPHYRCTSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLAISLDNIESS
        PY +  H+  P    H+     FLRA  AGI++I II  V+  + +L+  P LP+F+V S Q+ NFS A+ SLSA W VGFSV NPNKK++IS D ++S+
Subjt:  PYPHWIHHPPPPPPPHYRCTSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLAISLDNIESS

Query:  IYYKDKILSQARIHRFAVPRRNSTAVVTPFVADSA-ADMSVLNDINGDFARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPSSPDGGSG
        ++YK++ILS+ R+  F   +R  T V   F + +A  D S +N+IN D  RGA+ F V +   V F  G WR R    R +C DL+VG+SS +S    SG
Subjt:  IYYKDKILSQARIHRFAVPRRNSTAVVTPFVADSA-ADMSVLNDINGDFARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPSSPDGGSG

Query:  ELVGGSRQCKV
        +L+G SR C+V
Subjt:  ELVGGSRQCKV

TrEMBL top hitse value%identityAlignment
A0A0A0LT76 LEA_2 domain-containing protein2.0e-5257.84Show/hide
Query:  PPPPPP----PHYRCTSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLAISLDNIESSIYYK
        PPP P     PH    SPF+R FAAGI L+L I  ++Y ++YLIF P+L   ++ SLQ +NFS  A + S  W+VGFS+NNPNKKLAIS  N+ESSIYYK
Subjt:  PPPPPP----PHYRCTSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLAISLDNIESSIYYK

Query:  DKILSQARIHRFAVPRRNSTAVVTPFVADSAADMSVLNDINGDFARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPSSPDGGSGELVGG
        D I++QAR  RF +P RNST +V+PF+AD   D SVLNDI+GD  RG I+FTV VLG+   E GVWR  GT  R VCSDL+V  S P    G SG+LVGG
Subjt:  DKILSQARIHRFAVPRRNSTAVVTPFVADSAADMSVLNDINGDFARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPSSPDGGSGELVGG

Query:  SRQC
        SRQC
Subjt:  SRQC

A0A1S3CJS5 uncharacterized protein LOC1035017573.6e-5758.94Show/hide
Query:  PPPPP--PPHYRC--TSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLAISLDNIESSIYYK
        PPP P    H  C  +SPFLR FAAG+ L+L IA V+Y++++L F P+LP  ++ SLQL NFS AA +  + WIVGFS+NNPNKKLAIS  N++SSIYYK
Subjt:  PPPPP--PPHYRC--TSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLAISLDNIESSIYYK

Query:  DKILSQARIHRFAVPRRNSTAVVTPFVADSAADMSVLNDINGDFARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPSSPDGGSGELVGG
        D I++QARI RF +  RNST +V PF+A S  D SVLNDINGD ARG INFTV VLG+  F+  +W+WRGT  + VCSDL+VG S P S  G SG+LVGG
Subjt:  DKILSQARIHRFAVPRRNSTAVVTPFVADSAADMSVLNDINGDFARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPSSPDGGSGELVGG

Query:  SRQCKVR
        S+QC+++
Subjt:  SRQCKVR

A0A2I4HLK5 uncharacterized protein At1g08160-like1.0e-3544.65Show/hide
Query:  PQHQPYPHWIHHPPPPPPPHYRCTSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLAISLDN
        P HQ  P++ ++ P P P     +  F+R F A ++L+  +  V   V +L+  P LPDF+V SL L NFS A+ SL+  W V FSV NPNKKL+IS + 
Subjt:  PQHQPYPHWIHHPPPPPPPHYRCTSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLAISLDN

Query:  IESSIYYKDKILSQARIHRFAVPRRNSTAVVTPF-VADSAADMSVLNDINGDFARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPSSPD
        + SS++YK + +S  R+  F + +RN T +   F  AD+  D  V+NDINGD ARG ++F V V   V F  G WR R    R +C  LAVG+SS SS  
Subjt:  IESSIYYKDKILSQARIHRFAVPRRNSTAVVTPF-VADSAADMSVLNDINGDFARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPSSPD

Query:  GGSGELVGGSRQCKV
         GSG LVGG+R C+V
Subjt:  GGSGELVGGSRQCKV

A0A5D3E5N0 Protein YLS9 isoform X23.6e-5758.94Show/hide
Query:  PPPPP--PPHYRC--TSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLAISLDNIESSIYYK
        PPP P    H  C  +SPFLR FAAG+ L+L IA V+Y++++L F P+LP  ++ SLQL NFS AA +  + WIVGFS+NNPNKKLAIS  N++SSIYYK
Subjt:  PPPPP--PPHYRC--TSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLAISLDNIESSIYYK

Query:  DKILSQARIHRFAVPRRNSTAVVTPFVADSAADMSVLNDINGDFARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPSSPDGGSGELVGG
        D I++QARI RF +  RNST +V PF+A S  D SVLNDINGD ARG INFTV VLG+  F+  +W+WRGT  + VCSDL+VG S P S  G SG+LVGG
Subjt:  DKILSQARIHRFAVPRRNSTAVVTPFVADSAADMSVLNDINGDFARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPSSPDGGSGELVGG

Query:  SRQCKVR
        S+QC+++
Subjt:  SRQCKVR

A0A6J1H136 NDR1/HIN1-like protein 25.9e-3644.08Show/hide
Query:  PYPHWIHHPPPPPPPHYRCTSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLAISLDNIESS
        PY +  H+  P    H+     FLRA  AGI++I II  V+  + +L+  P LP+F+V S Q+ NFS A+ SLSA W VGFSV NPNKK++IS D ++S+
Subjt:  PYPHWIHHPPPPPPPHYRCTSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLAISLDNIESS

Query:  IYYKDKILSQARIHRFAVPRRNSTAVVTPFVADSA-ADMSVLNDINGDFARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPSSPDGGSG
        ++YK++ILS+ R+  F   +R  T V   F + +A  D S +N+IN D  RGA+ F V +   V F  G WR R    R +C DL+VG+SS +S    SG
Subjt:  IYYKDKILSQARIHRFAVPRRNSTAVVTPFVADSA-ADMSVLNDINGDFARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPSSPDGGSG

Query:  ELVGGSRQCKV
        +L+G SR C+V
Subjt:  ELVGGSRQCKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27260.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family7.4e-1527.62Show/hide
Query:  YPHWIHHPPPPPPPHYRCTSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLAISLDNIESSI
        YP+  H+P   P P+ R      R F      +L++ ++++ + +LI  P LPD  + SL + NF+ +   +S  W +     NPN K+++  +    ++
Subjt:  YPHWIHHPPPPPPPHYRCTSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLAISLDNIESSI

Query:  YYKDKILSQARIHRFAVPRRNSTAV-VTPFVADSAADMSVLNDINGD-FARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPSSPDGGSG
        YY    LS+ R+  F   +++ T V  T  V+ +  D  +++ I  +   +G + F + ++ +V F  G +R R  +    C D+AVG+   S    G G
Subjt:  YYKDKILSQARIHRFAVPRRNSTAV-VTPFVADSAADMSVLNDINGD-FARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPSSPDGGSG

Query:  ELVGGSRQCK
        ++VG S++CK
Subjt:  ELVGGSRQCK

AT3G52460.1 hydroxyproline-rich glycoprotein family protein9.4e-1021.95Show/hide
Query:  PMADTSTHPQHQPYPHWIHHPPPPPPPHY---------------------------------RCTSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPD
        P     T+P    YP   +H PPPP P+Y                                   +S F+R    G+++++++  +  T+ +L+  P +P 
Subjt:  PMADTSTHPQHQPYPHWIHHPPPPPPPHY---------------------------------RCTSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPD

Query:  FQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLAISLDNIESSIYY-----KDKILSQARIHRFAVPRRNSTAVVTPFVADSAADMS----VLNDING
        F V +  + NF+   P  SA W    ++ N N KL    D I+  +Y+     +D+ L+ A      V  + S  +     A           V++++  
Subjt:  FQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLAISLDNIESSIYY-----KDKILSQARIHRFAVPRRNSTAVVTPFVADSAADMS----VLNDING

Query:  DFARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPS
        +   G + F++ +   V F+T  W  R +  +  C  L VG    S
Subjt:  DFARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPS

AT5G36970.1 NDR1/HIN1-like 252.7e-0429.17Show/hide
Query:  IVLILIIAVV--VYTVEYLIFGPLLPDFQVVSLQLLNFS-DAAPSLSAFWIVGFSVNNPNKKLAISL-DNIESSIYYKDKILSQARIHRFAVPRRNSTAV
        +VL L+I +V  +  + YL+F P  PD+ +  LQL  F  +   SLS  + V  +  NPN+K+ I   D  + S+ Y    +S   + +F     N+T +
Subjt:  IVLILIIAVV--VYTVEYLIFGPLLPDFQVVSLQLLNFS-DAAPSLSAFWIVGFSVNNPNKKLAISL-DNIESSIYYKDKILSQARIHRFAVPRRNSTAV

Query:  ---VTPFVADSAADMSVLND
           +T F  ++ + M+ L +
Subjt:  ---VTPFVADSAADMSVLND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCCTCTCACATCAGCCCATGGCCGACACCTCCACGCATCCTCAACACCAACCCTATCCTCACTGGATCCATCATCCGCCGCCACCACCGCCGCCTCATTATCG
CTGCACCTCACCGTTCCTCCGAGCCTTCGCTGCCGGCATAGTCCTCATCCTCATCATCGCTGTCGTCGTCTACACTGTCGAATATCTCATCTTTGGTCCCCTCCTCCCCG
ACTTCCAAGTCGTTTCACTTCAACTTCTCAACTTCTCCGACGCCGCCCCGTCCCTCTCCGCCTTTTGGATAGTCGGATTTTCCGTCAACAACCCCAACAAGAAGCTCGCG
ATCTCATTGGACAACATCGAGTCCTCCATTTACTACAAAGATAAGATTCTCTCTCAGGCCCGGATCCACCGCTTCGCCGTCCCCCGAAGGAACTCGACGGCCGTCGTCAC
CCCTTTCGTCGCCGACTCCGCTGCCGACATGTCGGTTTTGAACGACATCAATGGCGACTTTGCTCGTGGAGCAATTAATTTCACAGTGGCGGTTCTTGGCCATGTAGCGT
TCGAGACCGGCGTGTGGCGGTGGAGGGGTACATTTTTTCGGGCTGTTTGCAGCGATTTGGCCGTCGGAATCTCATCGCCGTCGAGTCCCGACGGCGGGTCCGGCGAGTTG
GTTGGTGGCTCAAGGCAATGCAAGGTACGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCCTCTCACATCAGCCCATGGCCGACACCTCCACGCATCCTCAACACCAACCCTATCCTCACTGGATCCATCATCCGCCGCCACCACCGCCGCCTCATTATCG
CTGCACCTCACCGTTCCTCCGAGCCTTCGCTGCCGGCATAGTCCTCATCCTCATCATCGCTGTCGTCGTCTACACTGTCGAATATCTCATCTTTGGTCCCCTCCTCCCCG
ACTTCCAAGTCGTTTCACTTCAACTTCTCAACTTCTCCGACGCCGCCCCGTCCCTCTCCGCCTTTTGGATAGTCGGATTTTCCGTCAACAACCCCAACAAGAAGCTCGCG
ATCTCATTGGACAACATCGAGTCCTCCATTTACTACAAAGATAAGATTCTCTCTCAGGCCCGGATCCACCGCTTCGCCGTCCCCCGAAGGAACTCGACGGCCGTCGTCAC
CCCTTTCGTCGCCGACTCCGCTGCCGACATGTCGGTTTTGAACGACATCAATGGCGACTTTGCTCGTGGAGCAATTAATTTCACAGTGGCGGTTCTTGGCCATGTAGCGT
TCGAGACCGGCGTGTGGCGGTGGAGGGGTACATTTTTTCGGGCTGTTTGCAGCGATTTGGCCGTCGGAATCTCATCGCCGTCGAGTCCCGACGGCGGGTCCGGCGAGTTG
GTTGGTGGCTCAAGGCAATGCAAGGTACGATGA
Protein sequenceShow/hide protein sequence
MSSLSHQPMADTSTHPQHQPYPHWIHHPPPPPPPHYRCTSPFLRAFAAGIVLILIIAVVVYTVEYLIFGPLLPDFQVVSLQLLNFSDAAPSLSAFWIVGFSVNNPNKKLA
ISLDNIESSIYYKDKILSQARIHRFAVPRRNSTAVVTPFVADSAADMSVLNDINGDFARGAINFTVAVLGHVAFETGVWRWRGTFFRAVCSDLAVGISSPSSPDGGSGEL
VGGSRQCKVR