; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025730 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025730
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationchr10:18708206..18709048
RNA-Seq ExpressionLag0025730
SyntenyLag0025730
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012717.1 putative CCR4-associated factor 1-like 11, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-14089.21Show/hide
Query:  MVNQDLN-NSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLG
        MV+ DLN N  K IKIR+VWASNLESEF+LIRD IDHFPCVSMDTEFPGIVFT P  P+NA NR  SDHY+LLKSNVDALNLIQIGITLSDSDGNLPDLG
Subjt:  MVNQDLN-NSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLG

Query:  TDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLR
        TDDSRFIWEFNFMDFD+ARD +APDSI+LLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+SLPNRL+EFLG+LR
Subjt:  TDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLR

Query:  VFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE
        V FGD VYDVKYMMRFCKSLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ EVEKHAGVLYGLE
Subjt:  VFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE

XP_022142408.1 probable CCR4-associated factor 1 homolog 11 [Momordica charantia]7.9e-14690.97Show/hide
Query:  MVNQDLNNSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTD
        MV QDL N+SKPI+IR+VWASNLESEFELIRD+ID FPCVSMDTEFPG+VFTDPA+PY+ QNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGT 
Subjt:  MVNQDLNNSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTD

Query:  DSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVF
         SRFIWEFNFMDFDVARD HAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVK+LT++SLP+RLEEFLG+LRVF
Subjt:  DSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVF

Query:  FGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV
        FGD VYDVKYMMRFCKSLYGGLDRIAKILNV+RAVGKCHQAGSDSLLTWHAFQKMRDT+FVQ  +EKHAGVLYGLEV
Subjt:  FGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV

XP_022945861.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata]1.3e-14089.21Show/hide
Query:  MVNQDLNNSS-KPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLG
        MV+ DLNN+  K IKIR+VWASNLESEF+LIRD+IDHFPCVSMDTEFPGIVFT P  P+NA NR  SDHY+LLKSNVDALNLIQIGITLSDSDGNLPDLG
Subjt:  MVNQDLNNSS-KPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLG

Query:  TDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLR
        TDDSRFIWEFNFMDFD+ARD +APDSI+LLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+SLPNRL+EFLG+LR
Subjt:  TDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLR

Query:  VFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE
        V FGD VYDVKYMMRFCKSLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ EVEKHAGVLYGLE
Subjt:  VFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE

XP_022967098.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita maxima]2.5e-13988.13Show/hide
Query:  MVNQDLNNSS-KPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLG
        MV+ DLNN+  K IKIR+VWASNLESEF+LIRD+IDHFPCVSMDTEFPGIVFT P  P+N+ NR  SDHY+LLKSNVDALNLIQIGITLSDSDGNLPDLG
Subjt:  MVNQDLNNSS-KPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLG

Query:  TDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLR
        TDDSRFIWEFNFMDFD+ARD +APDSI+LLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+ LPNR++EFLG+LR
Subjt:  TDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLR

Query:  VFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE
        V FGD VYDVKYMMRFCKSLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ EVEKHAGVLYGLE
Subjt:  VFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE

XP_038877224.1 probable CCR4-associated factor 1 homolog 11 [Benincasa hispida]3.8e-14087.36Show/hide
Query:  MVNQDLNNSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTD
        MV  DLN ++K IKIR+VWASNLESEF+LIRD+ID FPCVSMDTEFPGIVF DPARP+N Q++PSDHYRLLKSNVDAL+LIQIGITLSDSDGNLPDLGTD
Subjt:  MVNQDLNNSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTD

Query:  DSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVF
        D+RFIWEFNFMDFDVARD HAPDSIELLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILTQ+ LP+R++EFLG+LRVF
Subjt:  DSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVF

Query:  FGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV
        FGD VYD+KY+MRFC+SLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDT+FVQ E++KHAGVLYGLEV
Subjt:  FGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV

TrEMBL top hitse value%identityAlignment
A0A0A0LYC8 Poly(A)-specific ribonuclease1.4e-12780.87Show/hide
Query:  MVNQDLNNSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTD
        M+  DLN + K I+IR+VWASNLESEF LIRD+ID FPCVSMDTEFPG++F     P  + N PS HY+ LKSNVD L+LIQIGITLSDSDGNLPDLGT 
Subjt:  MVNQDLNNSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTD

Query:  DSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVF
        D+RFIWEFNF DFDVARD HAP+SIELLRRQGIDFDRNR EGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILT Q LP  LE+FLG++R+F
Subjt:  DSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVF

Query:  FGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV
        FGD VYD+KY+MRFC+SLYGGLDRIAK +NVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ E+ KHAGVLYGLEV
Subjt:  FGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV

A0A5A7T1W0 Poly(A)-specific ribonuclease2.0e-12680.07Show/hide
Query:  MVNQDLN----NSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPD
        M+  DLN    +  KPI+IR+VWASNL+SEF LI D+ID FPCVSMDTEFPG++F    +P    N PS HY+ LKSNVD L+LIQIGITLSDSDGNLPD
Subjt:  MVNQDLN----NSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPD

Query:  LGTDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGL
        LGT D+RFIWEFNF DFDVARD HAPDSIELLRRQGIDF+RNR EGIDS RFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILTQQ LP  LEEFLG+
Subjt:  LGTDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGL

Query:  LRVFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV
        +RVFFGD VYD+KYMMRFC+SLYGGLDRIAK +NVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFV+ E+ KHAGVLYGLEV
Subjt:  LRVFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV

A0A6J1CN71 Poly(A)-specific ribonuclease3.8e-14690.97Show/hide
Query:  MVNQDLNNSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTD
        MV QDL N+SKPI+IR+VWASNLESEFELIRD+ID FPCVSMDTEFPG+VFTDPA+PY+ QNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGT 
Subjt:  MVNQDLNNSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTD

Query:  DSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVF
         SRFIWEFNFMDFDVARD HAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVK+LT++SLP+RLEEFLG+LRVF
Subjt:  DSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVF

Query:  FGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV
        FGD VYDVKYMMRFCKSLYGGLDRIAKILNV+RAVGKCHQAGSDSLLTWHAFQKMRDT+FVQ  +EKHAGVLYGLEV
Subjt:  FGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV

A0A6J1G223 Poly(A)-specific ribonuclease6.3e-14189.21Show/hide
Query:  MVNQDLNNSS-KPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLG
        MV+ DLNN+  K IKIR+VWASNLESEF+LIRD+IDHFPCVSMDTEFPGIVFT P  P+NA NR  SDHY+LLKSNVDALNLIQIGITLSDSDGNLPDLG
Subjt:  MVNQDLNNSS-KPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLG

Query:  TDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLR
        TDDSRFIWEFNFMDFD+ARD +APDSI+LLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+SLPNRL+EFLG+LR
Subjt:  TDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLR

Query:  VFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE
        V FGD VYDVKYMMRFCKSLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ EVEKHAGVLYGLE
Subjt:  VFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE

A0A6J1HU54 Poly(A)-specific ribonuclease1.2e-13988.13Show/hide
Query:  MVNQDLNNSS-KPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLG
        MV+ DLNN+  K IKIR+VWASNLESEF+LIRD+IDHFPCVSMDTEFPGIVFT P  P+N+ NR  SDHY+LLKSNVDALNLIQIGITLSDSDGNLPDLG
Subjt:  MVNQDLNNSS-KPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLG

Query:  TDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLR
        TDDSRFIWEFNFMDFD+ARD +APDSI+LLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+ LPNR++EFLG+LR
Subjt:  TDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLR

Query:  VFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE
        V FGD VYDVKYMMRFCKSLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ EVEKHAGVLYGLE
Subjt:  VFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 111.2e-10771.11Show/hide
Query:  SKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDL-GTDDSRFIWEF
        S  I IR VWA NLESEF+LIR +++ +P +SMDTEFPG+++          N P+  Y LLKSNVDAL+LIQ+G+TLSD+DGNLPDL G  + R+IWEF
Subjt:  SKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDL-GTDDSRFIWEF

Query:  NFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVFFGDYVYDV
        NF DFDV RD HAPDSIELLRR GIDF+RNR EG++S RFAELMMSSGL+CN+SVSWVTFHSAYDFGYLVKILT++ LP  L EFLGLLR FFGD VYDV
Subjt:  NFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVFFGDYVYDV

Query:  KYMMRFCKS-LYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV
        K++MRFC+  LYGGLDR+A+ L VNRAVGKCHQAGSDSLLTW AFQ+MRD +FV++  EKHAGVLYGLEV
Subjt:  KYMMRFCKS-LYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV

Q9LEU4 Probable CCR4-associated factor 1 homolog 104.5e-7554.14Show/hide
Query:  IKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMD
        I IR+VW  NL  EF LIR+++D F  ++MDTEFPG+V   P   +   N    +YR LK NVD L LIQ+G+T SD +GNLP  GT D   IW+FNF +
Subjt:  IKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMD

Query:  FDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVFFGDYVYDVKYMM
        F++  D +A +SIELLR+ GIDF +N  +GID  RF ELMMSSG+V ND++SWVTFH  YDFGYLVK+LT + LP +  +F  LL V+F   VYD+K++M
Subjt:  FDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVFFGDYVYDVKYMM

Query:  RFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVE
         FC  L+GGL+R+A+++ V R VG CHQAGSDSLLT  +F+K+++ +F     EK+ GVLYGL VE
Subjt:  RFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVE

Q9LXM2 Probable CCR4-associated factor 1 homolog 91.2e-10769.31Show/hide
Query:  NQDLNNSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDS
        N+DL      +  R+VWA NLESEFELI ++ID +P +SMDTEFPG++F    R  N    P D Y LLK+NVDAL+LIQ+G+TLSD +GNLPDLG D  
Subjt:  NQDLNNSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDS

Query:  R-FIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVFF
        R FIWEFNF DFDVARD HAPDSIELLRRQGIDF+RN  +G++S RFAELMMSSGLVCN+ VSWVTFHSAYDFGYL+KILT++ LP  L EF  ++RV F
Subjt:  R-FIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVFF

Query:  GDYVYDVKYMMRFC-KSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV
        G+ VYDVK+MM+FC + L+GGLDR+A+ L VNRAVGKCHQAGSDSLLTWHAFQ+MRD +FVQ+  EKHAGVLYGLEV
Subjt:  GDYVYDVKYMMRFC-KSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV

Q9SAI2 Probable CCR4-associated factor 1 homolog 61.3e-7755.43Show/hide
Query:  IKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSD-HYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFM
        I+IR+VW  NL+ E +LIRDV+D FP V+MDTEFPGIV     RP       +D HY  LK+NV+ L +IQ+G+T S+  GNLP  GT D   IW+FNF 
Subjt:  IKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSD-HYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFM

Query:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVFFGDYVYDVKYM
        +FD+  D  A DSIELL++ GID  +N ++GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q+LP+   +F  L+ V+F   VYD+K++
Subjt:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVFFGDYVYDVKYM

Query:  MRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVE
        M+FC SL+GGL+++A++L V R VG CHQAGSDSLLT   F+K+++ FFV   + K++GVLYGL VE
Subjt:  MRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVE

Q9SKZ2 Probable CCR4-associated factor 1 homolog 71.7e-7956.18Show/hide
Query:  IKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNA-QNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFM
        I+IR+VW  NLESE  LIR+V+D FP V+MDTEFPGIV     RP    +     HY  LK+NV+ L +IQ+G+T SD  GNLP  GTD+   IW+FNF 
Subjt:  IKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNA-QNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFM

Query:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVFFGDYVYDVKYM
        +FD+  D +A DSIELLR+ GIDF +N   GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q+LP     F  ++ V+F   VYD+K++
Subjt:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVFFGDYVYDVKYM

Query:  MRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVE
        M+FC SL+GGL+++A++L+V R VG CHQAGSDSLLT   F+K+++ FF+   +EK++GVLYGL VE
Subjt:  MRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVE

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.9e-7955.43Show/hide
Query:  IKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSD-HYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFM
        I+IR+VW  NL+ E +LIRDV+D FP V+MDTEFPGIV     RP       +D HY  LK+NV+ L +IQ+G+T S+  GNLP  GT D   IW+FNF 
Subjt:  IKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSD-HYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFM

Query:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVFFGDYVYDVKYM
        +FD+  D  A DSIELL++ GID  +N ++GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q+LP+   +F  L+ V+F   VYD+K++
Subjt:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVFFGDYVYDVKYM

Query:  MRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVE
        M+FC SL+GGL+++A++L V R VG CHQAGSDSLLT   F+K+++ FFV   + K++GVLYGL VE
Subjt:  MRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVE

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.9e-7955.43Show/hide
Query:  IKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSD-HYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFM
        I+IR+VW  NL+ E +LIRDV+D FP V+MDTEFPGIV     RP       +D HY  LK+NV+ L +IQ+G+T S+  GNLP  GT D   IW+FNF 
Subjt:  IKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSD-HYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFM

Query:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVFFGDYVYDVKYM
        +FD+  D  A DSIELL++ GID  +N ++GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q+LP+   +F  L+ V+F   VYD+K++
Subjt:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVFFGDYVYDVKYM

Query:  MRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVE
        M+FC SL+GGL+++A++L V R VG CHQAGSDSLLT   F+K+++ FFV   + K++GVLYGL VE
Subjt:  MRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVE

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-8056.18Show/hide
Query:  IKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNA-QNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFM
        I+IR+VW  NLESE  LIR+V+D FP V+MDTEFPGIV     RP    +     HY  LK+NV+ L +IQ+G+T SD  GNLP  GTD+   IW+FNF 
Subjt:  IKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNA-QNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFM

Query:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVFFGDYVYDVKYM
        +FD+  D +A DSIELLR+ GIDF +N   GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q+LP     F  ++ V+F   VYD+K++
Subjt:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVFFGDYVYDVKYM

Query:  MRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVE
        M+FC SL+GGL+++A++L+V R VG CHQAGSDSLLT   F+K+++ FF+   +EK++GVLYGL VE
Subjt:  MRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVE

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.2e-10969.31Show/hide
Query:  NQDLNNSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDS
        N+DL      +  R+VWA NLESEFELI ++ID +P +SMDTEFPG++F    R  N    P D Y LLK+NVDAL+LIQ+G+TLSD +GNLPDLG D  
Subjt:  NQDLNNSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDS

Query:  R-FIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVFF
        R FIWEFNF DFDVARD HAPDSIELLRRQGIDF+RN  +G++S RFAELMMSSGLVCN+ VSWVTFHSAYDFGYL+KILT++ LP  L EF  ++RV F
Subjt:  R-FIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVFF

Query:  GDYVYDVKYMMRFC-KSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV
        G+ VYDVK+MM+FC + L+GGLDR+A+ L VNRAVGKCHQAGSDSLLTWHAFQ+MRD +FVQ+  EKHAGVLYGLEV
Subjt:  GDYVYDVKYMMRFC-KSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV

AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.2e-10971.11Show/hide
Query:  SKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDL-GTDDSRFIWEF
        S  I IR VWA NLESEF+LIR +++ +P +SMDTEFPG+++          N P+  Y LLKSNVDAL+LIQ+G+TLSD+DGNLPDL G  + R+IWEF
Subjt:  SKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDL-GTDDSRFIWEF

Query:  NFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVFFGDYVYDV
        NF DFDV RD HAPDSIELLRR GIDF+RNR EG++S RFAELMMSSGL+CN+SVSWVTFHSAYDFGYLVKILT++ LP  L EFLGLLR FFGD VYDV
Subjt:  NFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVFFGDYVYDV

Query:  KYMMRFCKS-LYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV
        K++MRFC+  LYGGLDR+A+ L VNRAVGKCHQAGSDSLLTW AFQ+MRD +FV++  EKHAGVLYGLEV
Subjt:  KYMMRFCKS-LYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAACCAAGATCTCAACAACAGCAGTAAACCCATCAAAATCAGACAAGTTTGGGCCTCGAATCTCGAATCTGAGTTCGAGTTGATCCGCGATGTCATCGATCACTT
CCCTTGCGTTTCAATGGACACCGAGTTCCCCGGAATCGTCTTCACCGACCCGGCCAGACCCTACAACGCTCAGAATCGCCCCTCCGATCACTACAGACTCCTCAAATCTA
ACGTCGATGCTCTCAATCTCATCCAGATCGGCATCACTCTCTCCGATTCCGACGGCAACCTCCCGGATCTCGGCACCGACGACAGCCGTTTCATCTGGGAGTTCAACTTC
ATGGACTTCGACGTGGCGCGTGACTTCCACGCGCCGGACTCCATCGAGCTTCTCCGCCGCCAGGGCATCGACTTCGACCGGAACCGAGTCGAAGGGATCGACTCGTGCCG
GTTCGCCGAGTTGATGATGTCATCCGGACTCGTTTGCAACGACTCAGTGAGTTGGGTGACCTTTCACAGCGCCTACGATTTTGGATATTTAGTTAAGATTTTGACTCAAC
AGAGCCTTCCGAATCGGCTAGAGGAATTCCTCGGCCTTCTCAGGGTTTTCTTCGGCGATTACGTGTACGACGTGAAGTACATGATGCGATTCTGTAAGAGCCTCTACGGC
GGTTTGGACCGGATCGCGAAGATTTTGAATGTGAACCGGGCGGTTGGGAAGTGCCATCAGGCCGGTTCGGATAGTTTGTTGACGTGGCATGCGTTTCAGAAGATGAGGGA
TACGTTTTTTGTACAGGAGGAGGTGGAGAAACATGCTGGCGTGTTGTATGGATTGGAGGTGGAGGTCGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAACCAAGATCTCAACAACAGCAGTAAACCCATCAAAATCAGACAAGTTTGGGCCTCGAATCTCGAATCTGAGTTCGAGTTGATCCGCGATGTCATCGATCACTT
CCCTTGCGTTTCAATGGACACCGAGTTCCCCGGAATCGTCTTCACCGACCCGGCCAGACCCTACAACGCTCAGAATCGCCCCTCCGATCACTACAGACTCCTCAAATCTA
ACGTCGATGCTCTCAATCTCATCCAGATCGGCATCACTCTCTCCGATTCCGACGGCAACCTCCCGGATCTCGGCACCGACGACAGCCGTTTCATCTGGGAGTTCAACTTC
ATGGACTTCGACGTGGCGCGTGACTTCCACGCGCCGGACTCCATCGAGCTTCTCCGCCGCCAGGGCATCGACTTCGACCGGAACCGAGTCGAAGGGATCGACTCGTGCCG
GTTCGCCGAGTTGATGATGTCATCCGGACTCGTTTGCAACGACTCAGTGAGTTGGGTGACCTTTCACAGCGCCTACGATTTTGGATATTTAGTTAAGATTTTGACTCAAC
AGAGCCTTCCGAATCGGCTAGAGGAATTCCTCGGCCTTCTCAGGGTTTTCTTCGGCGATTACGTGTACGACGTGAAGTACATGATGCGATTCTGTAAGAGCCTCTACGGC
GGTTTGGACCGGATCGCGAAGATTTTGAATGTGAACCGGGCGGTTGGGAAGTGCCATCAGGCCGGTTCGGATAGTTTGTTGACGTGGCATGCGTTTCAGAAGATGAGGGA
TACGTTTTTTGTACAGGAGGAGGTGGAGAAACATGCTGGCGTGTTGTATGGATTGGAGGTGGAGGTCGTGTAA
Protein sequenceShow/hide protein sequence
MVNQDLNNSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNF
MDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVFFGDYVYDVKYMMRFCKSLYG
GLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVEVV