; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025733 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025733
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr10:18760445..18761465
RNA-Seq ExpressionLag0025733
SyntenyLag0025733
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFS31826.1 hypothetical protein Acr_00g0019390 [Actinidia rufa]2.7e-2135.79Show/hide
Query:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAI-SPSVPCTVHGS-----------------------------
        +EELI++ D PFT  VM+  +P KFK+PT +P+DG KDP+ HL  YK+ MD   V D I   + P T+ GS                             
Subjt:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAI-SPSVPCTVHGS-----------------------------

Query:  -QRTTQASHQPFNSQTTAGESLRDYITCFNDEALQVEGYSEGATLVAITAGLEDERILNSIGKSQPRTYAELVSRAQKYMSTEELLKSKK
         QR  + S   FN +    E+LR+++T FN E L V+   +   + A  AG+   + L S+ K  P+T A L+ RAQKYM+ E+ LK+++
Subjt:  -QRTTQASHQPFNSQTTAGESLRDYITCFNDEALQVEGYSEGATLVAITAGLEDERILNSIGKSQPRTYAELVSRAQKYMSTEELLKSKK

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]5.9e-2135.29Show/hide
Query:  EEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAISPSV-PCTVHGSQRT-----TQASHQPFNS------------------------
        EE+MK +VP KFK+PT K +DG  D V HL+AY+ WMD +GVS+A+   V   T+ GS R       + S   F S                        
Subjt:  EEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAISPSV-PCTVHGSQRT-----TQASHQPFNS------------------------

Query:  -QTTAGESLRDYITCFNDEALQVEGYSEGATLVAITAGLEDERILNSIGKSQPRTYAELVSRAQKYMSTEELLKSKKTKREHKRSSSSNYDIRKDKRQQT
         +  A ESL DY+  FN+E LQVEG +   +L+A  + + DE +  S GK  P T++E +SRAQKYMS  E   SK+ + E K+S  +        R+++
Subjt:  -QTTAGESLRDYITCFNDEALQVEGYSEGATLVAITAGLEDERILNSIGKSQPRTYAELVSRAQKYMSTEELLKSKKTKREHKRSSSSNYDIRKDKRQQT

Query:  DEGGQASRPWPRPTRPRRLLEQRQKLVLSLPSRSWTFN
         +  Q SR   R    R++  +  K +  LP  S  +N
Subjt:  DEGGQASRPWPRPTRPRRLLEQRQKLVLSLPSRSWTFN

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.8e-2531.69Show/hide
Query:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAISPSV-PCTVHGSQR------------TTQASHQPFNSQTTA
        +EEL+DQ D PFTEE+M+ +VP KFK+PT K +D   DPV HL+AY+ WMD +GVS+A+   V   T++GS R            + ++  + F +Q   
Subjt:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAISPSV-PCTVHGSQR------------TTQASHQPFNSQTTA

Query:  G------------------ESLRDYITCFNDEALQVEGYSEGATLVAITAGLEDERILNSIGKSQPRTYAELVSRAQKYMSTEELLKSK----------K
        G                  ESLRDY+  FN+E LQVEG ++  +L+A  +G+ DE +  S GK  P T++E +SRAQ+YMS  E   SK          K
Subjt:  G------------------ESLRDYITCFNDEALQVEGYSEGATLVAITAGLEDERILNSIGKSQPRTYAELVSRAQKYMSTEELLKSK----------K

Query:  TKREHKRSSSSNYDIRKDKRQQTDEGGQASRPWPRPT---------RPRRLLEQRQKLVLSLPSRS---WTFNQELHSTERRDRSVDPKRIPEGIHHKGR
         +R   +   S ++ ++D+  Q D   +  +  P            + +RLL+  +++  S   RS   +      H    +D   D K   EG+  +G 
Subjt:  TKREHKRSSSSNYDIRKDKRQQTDEGGQASRPWPRPT---------RPRRLLEQRQKLVLSLPSRS---WTFNQELHSTERRDRSVDPKRIPEGIHHKGR

Query:  GRPEMARSTRDDPGKEGGGPLLEIR
         +  +        G+    P  EIR
Subjt:  GRPEMARSTRDDPGKEGGGPLLEIR

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]5.5e-2738.16Show/hide
Query:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAISPSV-PCTVHGSQR------------TTQASHQPFNSQTTA
        +EEL+ Q D PFTEE+M+ +VP KFK+PT KP+DG  +PV HL+AY+ WMD +GVSDAI   V   T++GS R            + ++  + F +Q   
Subjt:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAISPSV-PCTVHGSQR------------TTQASHQPFNSQTTA

Query:  G------------------ESLRDYITCFNDEALQVEGYSEGATLVAITAGLEDERILNSIGKSQPRTYAELVSRAQKYMSTEELLKS------KKTKRE
        G                  ESL DY+  FN+E LQ+EG ++  +L+A  +G+ DE +  S  K  P T++E +SRAQ+YMS  E   S      K+T ++
Subjt:  G------------------ESLRDYITCFNDEALQVEGYSEGATLVAITAGLEDERILNSIGKSQPRTYAELVSRAQKYMSTEELLKS------KKTKRE

Query:  HKRSSSSNYDIRKDKRQQTDEGGQASRP
         +RS       R +KR   D G Q   P
Subjt:  HKRSSSSNYDIRKDKRQQTDEGGQASRP

XP_024047974.1 uncharacterized protein LOC112101548 [Citrus clementina]1.3e-2032.6Show/hide
Query:  EELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAI-SPSVPCTVHGSQRTTQASHQP-----FNS------------
        ++++ + +PPFT+E+M+A  P  F++P+ +PYDG+K P++H+  Y+S M+  GVS AI   + P T+  + R      +P     FN             
Subjt:  EELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAI-SPSVPCTVHGSQRTTQASHQP-----FNS------------

Query:  -------------QTTAGESLRDYITCFNDEALQVEGYSEGATLVAITAGLEDERILNSIGKSQPRTYAELVSRAQKYMSTEELLKSKKTKR-----EHK
                     +   GESLR+YI  +N E  QV+GY +G  L  +  GL+  R+  S+ K+ P TY+E++SRA+KY + EE  +SKK +      ++K
Subjt:  -------------QTTAGESLRDYITCFNDEALQVEGYSEGATLVAITAGLEDERILNSIGKSQPRTYAELVSRAQKYMSTEELLKSKKTKR-----EHK

Query:  RSSSSNYDIRKDKRQQTDEGGQASRPW
        ++     DIR  +  Q     Q  RPW
Subjt:  RSSSSNYDIRKDKRQQTDEGGQASRPW

TrEMBL top hitse value%identityAlignment
A0A6J1D7D2 uncharacterized protein LOC1110183072.9e-2135.29Show/hide
Query:  EEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAISPSV-PCTVHGSQRT-----TQASHQPFNS------------------------
        EE+MK +VP KFK+PT K +DG  D V HL+AY+ WMD +GVS+A+   V   T+ GS R       + S   F S                        
Subjt:  EEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAISPSV-PCTVHGSQRT-----TQASHQPFNS------------------------

Query:  -QTTAGESLRDYITCFNDEALQVEGYSEGATLVAITAGLEDERILNSIGKSQPRTYAELVSRAQKYMSTEELLKSKKTKREHKRSSSSNYDIRKDKRQQT
         +  A ESL DY+  FN+E LQVEG +   +L+A  + + DE +  S GK  P T++E +SRAQKYMS  E   SK+ + E K+S  +        R+++
Subjt:  -QTTAGESLRDYITCFNDEALQVEGYSEGATLVAITAGLEDERILNSIGKSQPRTYAELVSRAQKYMSTEELLKSKKTKREHKRSSSSNYDIRKDKRQQT

Query:  DEGGQASRPWPRPTRPRRLLEQRQKLVLSLPSRSWTFN
         +  Q SR   R    R++  +  K +  LP  S  +N
Subjt:  DEGGQASRPWPRPTRPRRLLEQRQKLVLSLPSRSWTFN

A0A6J1DWY0 uncharacterized protein LOC1110252938.6e-2631.69Show/hide
Query:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAISPSV-PCTVHGSQR------------TTQASHQPFNSQTTA
        +EEL+DQ D PFTEE+M+ +VP KFK+PT K +D   DPV HL+AY+ WMD +GVS+A+   V   T++GS R            + ++  + F +Q   
Subjt:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAISPSV-PCTVHGSQR------------TTQASHQPFNSQTTA

Query:  G------------------ESLRDYITCFNDEALQVEGYSEGATLVAITAGLEDERILNSIGKSQPRTYAELVSRAQKYMSTEELLKSK----------K
        G                  ESLRDY+  FN+E LQVEG ++  +L+A  +G+ DE +  S GK  P T++E +SRAQ+YMS  E   SK          K
Subjt:  G------------------ESLRDYITCFNDEALQVEGYSEGATLVAITAGLEDERILNSIGKSQPRTYAELVSRAQKYMSTEELLKSK----------K

Query:  TKREHKRSSSSNYDIRKDKRQQTDEGGQASRPWPRPT---------RPRRLLEQRQKLVLSLPSRS---WTFNQELHSTERRDRSVDPKRIPEGIHHKGR
         +R   +   S ++ ++D+  Q D   +  +  P            + +RLL+  +++  S   RS   +      H    +D   D K   EG+  +G 
Subjt:  TKREHKRSSSSNYDIRKDKRQQTDEGGQASRPWPRPT---------RPRRLLEQRQKLVLSLPSRS---WTFNQELHSTERRDRSVDPKRIPEGIHHKGR

Query:  GRPEMARSTRDDPGKEGGGPLLEIR
         +  +        G+    P  EIR
Subjt:  GRPEMARSTRDDPGKEGGGPLLEIR

A0A6J1E1E7 uncharacterized protein LOC1110255482.7e-2738.16Show/hide
Query:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAISPSV-PCTVHGSQR------------TTQASHQPFNSQTTA
        +EEL+ Q D PFTEE+M+ +VP KFK+PT KP+DG  +PV HL+AY+ WMD +GVSDAI   V   T++GS R            + ++  + F +Q   
Subjt:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAISPSV-PCTVHGSQR------------TTQASHQPFNSQTTA

Query:  G------------------ESLRDYITCFNDEALQVEGYSEGATLVAITAGLEDERILNSIGKSQPRTYAELVSRAQKYMSTEELLKS------KKTKRE
        G                  ESL DY+  FN+E LQ+EG ++  +L+A  +G+ DE +  S  K  P T++E +SRAQ+YMS  E   S      K+T ++
Subjt:  G------------------ESLRDYITCFNDEALQVEGYSEGATLVAITAGLEDERILNSIGKSQPRTYAELVSRAQKYMSTEELLKS------KKTKRE

Query:  HKRSSSSNYDIRKDKRQQTDEGGQASRP
         +RS       R +KR   D G Q   P
Subjt:  HKRSSSSNYDIRKDKRQQTDEGGQASRP

A0A7J0DBQ5 Retrotrans_gag domain-containing protein1.3e-2135.79Show/hide
Query:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAI-SPSVPCTVHGS-----------------------------
        +EELI++ D PFT  VM+  +P KFK+PT +P+DG KDP+ HL  YK+ MD   V D I   + P T+ GS                             
Subjt:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAI-SPSVPCTVHGS-----------------------------

Query:  -QRTTQASHQPFNSQTTAGESLRDYITCFNDEALQVEGYSEGATLVAITAGLEDERILNSIGKSQPRTYAELVSRAQKYMSTEELLKSKK
         QR  + S   FN +    E+LR+++T FN E L V+   +   + A  AG+   + L S+ K  P+T A L+ RAQKYM+ E+ LK+++
Subjt:  -QRTTQASHQPFNSQTTAGESLRDYITCFNDEALQVEGYSEGATLVAITAGLEDERILNSIGKSQPRTYAELVSRAQKYMSTEELLKSKK

A0A7J0FQE9 Uncharacterized protein3.5e-1937.44Show/hide
Query:  MEELIDQVDPPFTEEVMKAEVPQKFKVPT-FKPYDGKKDPVQHLNAYKSWMDFHGVSD-AISPSVPCTVHGSQRTTQ--ASHQPFNSQTTAGESLRDYIT
        ++ L+ Q DPPFTE V+ A +  KFK+PT    Y+GK DP+ HL++YKS M   G SD  I  +   T+ GS R  Q  ASH  F       ESL+D++ 
Subjt:  MEELIDQVDPPFTEEVMKAEVPQKFKVPT-FKPYDGKKDPVQHLNAYKSWMDFHGVSD-AISPSVPCTVHGSQRTTQ--ASHQPFNSQTTAGESLRDYIT

Query:  CFNDEALQVEGYSEGATLVAITAGLEDERILNSIGKSQPRTYAELVSRAQKYMSTEELLKSKKTKR---EHKRS--SSSNYDIRKDKR-QQTDEGGQAS-
         FN   L+VE  S+   ++A+  GL    + +S+ K+ P T + L S+A KY++ EEL ++K+ +R   +HKR    +   D R++ R ++ D   + S 
Subjt:  CFNDEALQVEGYSEGATLVAITAGLEDERILNSIGKSQPRTYAELVSRAQKYMSTEELLKSKKTKR---EHKRS--SSSNYDIRKDKR-QQTDEGGQAS-

Query:  --RPWPRPTRP
          RP   P RP
Subjt:  --RPWPRPTRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAATTAATCGACCAAGTCGACCCACCCTTCACAGAAGAAGTCATGAAAGCCGAGGTGCCCCAGAAGTTCAAGGTACCTACATTCAAGCCGTATGATGGCAAGAA
AGACCCTGTCCAGCATCTAAATGCCTACAAAAGCTGGATGGACTTCCATGGCGTCTCAGATGCAATCAGCCCGAGCGTTCCTTGCACAGTTCATGGGAGCCAGAGAACAA
CGCAAGCCTCACATCAACCTTTTAACAGTCAAACAACAGCTGGGGAGAGCTTGCGTGATTACATAACGTGCTTTAACGACGAAGCACTGCAGGTTGAGGGATACAGTGAG
GGAGCGACCCTAGTAGCCATCACAGCCGGACTGGAAGACGAAAGAATACTCAACTCAATAGGTAAGAGCCAACCTCGAACCTATGCAGAGCTCGTCTCCCGGGCACAAAA
ATACATGAGCACAGAGGAGTTGCTCAAGTCAAAGAAGACGAAACGAGAGCACAAGAGATCTTCTTCATCTAACTACGACATTAGGAAGGACAAAAGGCAGCAGACCGACG
AGGGAGGCCAGGCGAGCAGACCATGGCCGAGGCCGACCAGACCAAGGAGGCTACTTGAACAAAGACAAAAGCTAGTATTGTCTCTTCCATCGAGATCATGGACATTCAAC
CAAGAACTGCATTCAACTGAAAGACGAGATCGAAGCGTTGATCCGAAACGGATACCTGAAGGAATTCACCACAAAGGCCGAGGCCGACCAGAGATGGCGAGGTCGACCAG
AGATGACCCGGGAAAAGAGGGTGGTGGACCTCTTCTGGAAATTCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAATTAATCGACCAAGTCGACCCACCCTTCACAGAAGAAGTCATGAAAGCCGAGGTGCCCCAGAAGTTCAAGGTACCTACATTCAAGCCGTATGATGGCAAGAA
AGACCCTGTCCAGCATCTAAATGCCTACAAAAGCTGGATGGACTTCCATGGCGTCTCAGATGCAATCAGCCCGAGCGTTCCTTGCACAGTTCATGGGAGCCAGAGAACAA
CGCAAGCCTCACATCAACCTTTTAACAGTCAAACAACAGCTGGGGAGAGCTTGCGTGATTACATAACGTGCTTTAACGACGAAGCACTGCAGGTTGAGGGATACAGTGAG
GGAGCGACCCTAGTAGCCATCACAGCCGGACTGGAAGACGAAAGAATACTCAACTCAATAGGTAAGAGCCAACCTCGAACCTATGCAGAGCTCGTCTCCCGGGCACAAAA
ATACATGAGCACAGAGGAGTTGCTCAAGTCAAAGAAGACGAAACGAGAGCACAAGAGATCTTCTTCATCTAACTACGACATTAGGAAGGACAAAAGGCAGCAGACCGACG
AGGGAGGCCAGGCGAGCAGACCATGGCCGAGGCCGACCAGACCAAGGAGGCTACTTGAACAAAGACAAAAGCTAGTATTGTCTCTTCCATCGAGATCATGGACATTCAAC
CAAGAACTGCATTCAACTGAAAGACGAGATCGAAGCGTTGATCCGAAACGGATACCTGAAGGAATTCACCACAAAGGCCGAGGCCGACCAGAGATGGCGAGGTCGACCAG
AGATGACCCGGGAAAAGAGGGTGGTGGACCTCTTCTGGAAATTCGTTGA
Protein sequenceShow/hide protein sequence
MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKSWMDFHGVSDAISPSVPCTVHGSQRTTQASHQPFNSQTTAGESLRDYITCFNDEALQVEGYSE
GATLVAITAGLEDERILNSIGKSQPRTYAELVSRAQKYMSTEELLKSKKTKREHKRSSSSNYDIRKDKRQQTDEGGQASRPWPRPTRPRRLLEQRQKLVLSLPSRSWTFN
QELHSTERRDRSVDPKRIPEGIHHKGRGRPEMARSTRDDPGKEGGGPLLEIR