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Lag0025735 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025735
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr10:18840049..18840462
RNA-Seq ExpressionLag0025735
SyntenyLag0025735
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159345.1 uncharacterized protein LOC111025764 [Momordica charantia]9.3e-1570.42Show/hide
Query:  MMKEFMARTDATIQSNQASMRALELQVRQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEP
        MMKE+MARTDA IQS  ASMR  E Q+ QLANELK RPQG  P  TE P+REGKEQ KAVTLRSG   +EP
Subjt:  MMKEFMARTDATIQSNQASMRALELQVRQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEP

XP_030503898.1 uncharacterized protein LOC115719117 [Cannabis sativa]7.1e-1546.04Show/hide
Query:  MMKEFMARTDATIQSNQASMRALELQVRQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEPRKTQDANKDGDKNIVVEKELEIGQGAGGS
        +M+++MA+ DA IQS  AS+R LE+Q+ QLAN+LK RPQG LPSDTE+PRR+GKE  KAVTLRSGK +E    +  A K   +   ++KE E+       
Subjt:  MMKEFMARTDATIQSNQASMRALELQVRQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEPRKTQDANKDGDKNIVVEKELEIGQGAGGS

Query:  KKDVGASCSVPDV-----EPPYVSPPPYVPPLPFPQRQK
        KK   ++  +P       +      P   PPLPFPQR K
Subjt:  KKDVGASCSVPDV-----EPPYVSPPPYVPPLPFPQRQK

XP_030505532.1 uncharacterized protein LOC115720524 [Cannabis sativa]5.4e-1544.7Show/hide
Query:  MMKEFMARTDATIQSNQASMRALELQVRQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEPRKTQDANKDGDKNIVVEKELEIGQGAGGS
        +M+++MA+ DA IQS  AS+R LELQ+  LANELKARPQG LPSDT++PRR+GKEQ K++ LRSGK                KN   E +++  +G   +
Subjt:  MMKEFMARTDATIQSNQASMRALELQVRQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEPRKTQDANKDGDKNIVVEKELEIGQGAGGS

Query:  KKDVGASCSVPDVEPPYVSPPPYVPPLPFPQR
         +     CS P             PPLPFPQR
Subjt:  KKDVGASCSVPDVEPPYVSPPPYVPPLPFPQR

XP_030507648.1 uncharacterized protein LOC115722545 [Cannabis sativa]1.6e-1466.67Show/hide
Query:  MMKEFMARTDATIQSNQASMRALELQVRQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLE
        +M+++MA+ DA IQS  AS+R LE+Q+ QLAN+LK RPQG LPSDTE+PRR+GKE  KA+TLRSGK LE
Subjt:  MMKEFMARTDATIQSNQASMRALELQVRQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLE

XP_030509265.1 uncharacterized protein LOC115723943 [Cannabis sativa]9.3e-1545.07Show/hide
Query:  MMKEFMARTDATIQSNQASMRALELQVRQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLE----------EPRKTQDANKDGDKNIVVEKE
        +M+++MA+ DA IQS  AS+R LELQ+  LANELKARPQG LPSDTE+PRR+GKEQ K++ LRSGK L+          EP   Q+  K   K      +
Subjt:  MMKEFMARTDATIQSNQASMRALELQVRQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLE----------EPRKTQDANKDGDKNIVVEKE

Query:  LEIGQGAGGSKKDVGASCSVPDVEPPYVSPPPYVPPLPFPQR
              A G + D   S           +P    PPLPFPQR
Subjt:  LEIGQGAGGSKKDVGASCSVPDVEPPYVSPPPYVPPLPFPQR

TrEMBL top hitse value%identityAlignment
A0A1U8MMF3 uncharacterized protein LOC1079392132.3e-1148.89Show/hide
Query:  MKEFMARTDATIQSNQASMRALELQVRQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEPRKTQDANKDGDKNIVVEKEL
        ++E+MA+ D  IQS+ AS+RAL+ Q+ Q+ N L  RPQ  LPSD E+PR +GKEQ KA+TLRSG  L+  +  QDA  + DK+   +K++
Subjt:  MKEFMARTDATIQSNQASMRALELQVRQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEPRKTQDANKDGDKNIVVEKEL

A0A6J1DW02 uncharacterized protein LOC1110248972.5e-1367.61Show/hide
Query:  MMKEFMARTDATIQSNQASMRALELQVRQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEP
        MMKE+MARTDA IQS  ASMR    Q+  LANELK RPQG  P  TE PRREGKEQ KAVTLRSG   + P
Subjt:  MMKEFMARTDATIQSNQASMRALELQVRQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEP

A0A6J1DWK1 uncharacterized protein LOC1110250533.0e-1142.62Show/hide
Query:  MMKEFMARTDATIQSNQASMRALELQVRQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEPRKTQDANKDGDKNIVVEKELEIGQGAGGS
        +MK++MA  DAT+QS  AS+R LELQV QLA +LK+RP G LPSDTE P+R+ KEQ  A+TLRSGK L                 + ++  +I QG   S
Subjt:  MMKEFMARTDATIQSNQASMRALELQVRQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEPRKTQDANKDGDKNIVVEKELEIGQGAGGS

Query:  KKDVGASCSVPDVEPPYVSPPP
        ++D   +  V  + P  ++  P
Subjt:  KKDVGASCSVPDVEPPYVSPPP

A0A6J1DYG0 uncharacterized protein LOC1110257644.5e-1570.42Show/hide
Query:  MMKEFMARTDATIQSNQASMRALELQVRQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEP
        MMKE+MARTDA IQS  ASMR  E Q+ QLANELK RPQG  P  TE P+REGKEQ KAVTLRSG   +EP
Subjt:  MMKEFMARTDATIQSNQASMRALELQVRQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEP

A0A6J1GJ68 uncharacterized protein LOC1114543443.0e-1140.29Show/hide
Query:  MMKEFMARTDATIQSNQASMRALELQVRQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEPRKTQDANKDGDKNIVVEKELEIGQGAGGS
        ++KE+MA+ D  IQS QAS++ LE+QV QLA EL+ RP GKLP+DTE P+REGKEQ +A+ LRSGK +    +      D       + +    + A   
Subjt:  MMKEFMARTDATIQSNQASMRALELQVRQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEPRKTQDANKDGDKNIVVEKELEIGQGAGGS

Query:  K--KDVGASCSVPDVEPPYVSPP---PYVPPLPFPQRQK
        +  KD       P ++    S      Y P  PFPQR K
Subjt:  K--KDVGASCSVPDVEPPYVSPP---PYVPPLPFPQRQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAAGAATTTATGGCTCGTACAGATGCCACAATTCAAAGTAATCAAGCCTCGATGAGAGCCCTGGAATTGCAAGTGCGTCAGCTAGCTAATGAGCTGAAGGCAAG
GCCTCAAGGGAAACTTCCCTCGGATACTGAACACCCTCGAAGGGAAGGTAAGGAGCAGGTAAAGGCAGTGACTCTTAGGAGTGGTAAGCCACTAGAAGAGCCTAGGAAAA
CCCAGGATGCAAATAAAGATGGTGATAAAAATATTGTAGTTGAGAAAGAGTTGGAGATTGGTCAGGGTGCTGGAGGCAGCAAGAAAGATGTTGGAGCATCTTGTTCTGTT
CCAGATGTGGAACCACCTTATGTGTCGCCCCCACCTTATGTACCACCTCTACCTTTTCCACAAAGGCAAAAGCCTAGGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGAAAGAATTTATGGCTCGTACAGATGCCACAATTCAAAGTAATCAAGCCTCGATGAGAGCCCTGGAATTGCAAGTGCGTCAGCTAGCTAATGAGCTGAAGGCAAG
GCCTCAAGGGAAACTTCCCTCGGATACTGAACACCCTCGAAGGGAAGGTAAGGAGCAGGTAAAGGCAGTGACTCTTAGGAGTGGTAAGCCACTAGAAGAGCCTAGGAAAA
CCCAGGATGCAAATAAAGATGGTGATAAAAATATTGTAGTTGAGAAAGAGTTGGAGATTGGTCAGGGTGCTGGAGGCAGCAAGAAAGATGTTGGAGCATCTTGTTCTGTT
CCAGATGTGGAACCACCTTATGTGTCGCCCCCACCTTATGTACCACCTCTACCTTTTCCACAAAGGCAAAAGCCTAGGAATTAG
Protein sequenceShow/hide protein sequence
MMKEFMARTDATIQSNQASMRALELQVRQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEPRKTQDANKDGDKNIVVEKELEIGQGAGGSKKDVGASCSV
PDVEPPYVSPPPYVPPLPFPQRQKPRN