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Lag0025737 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025737
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr10:18842110..18842974
RNA-Seq ExpressionLag0025737
SyntenyLag0025737
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB49850.1 hypothetical protein L484_000844 [Morus notabilis]2.7e-1529.17Show/hide
Query:  AGASSETGEIEEPRLPFVRFVNNLARAKYQE-VLKCDFLFERGF------GSDLPGFLESGIANLGWRQFCAKPVPVNANIVREFYANLDD---------
        A  SS T ++   R    +FV+N A  +Y+E +   + + E+GF          PGF+   I + GW+ FC  P+     +V+EFYANL +         
Subjt:  AGASSETGEIEEPRLPFVRFVNNLARAKYQE-VLKCDFLFERGF------GSDLPGFLESGIANLGWRQFCAKPVPVNANIVREFYANLDD---------

Query:  -----FPHAVFNEMMVAPSSD-------------QLSVAVREVGIEGAQWRVSQTRKHTFQAAYLKSEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAI
             F     N ++  P+ D             QL   ++ + I GAQW +S    +T     L+  A  W  F+  RLL +TH  T+SR+R +L +A+
Subjt:  -----FPHAVFNEMMVAPSSD-------------QLSVAVREVGIEGAQWRVSQTRKHTFQAAYLKSEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAI

Query:  LRSMSIDVGKIISSEV
        L    I+VG++I  ++
Subjt:  LRSMSIDVGKIISSEV

EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]1.2e-1534.57Show/hide
Query:  PGFLESGIANLGWRQFCAKPVPVNANIVREFYANLDDF-PHAVFNEMMVAP--------------------------SSDQLSVAVREVGIEGAQWRVSQ
        P F+   I   GWRQFC  P      +VREFYANL DF    VF + +  P                          + +QL V + EV IEGA W++S 
Subjt:  PGFLESGIANLGWRQFCAKPVPVNANIVREFYANLDDF-PHAVFNEMMVAP--------------------------SSDQLSVAVREVGIEGAQWRVSQ

Query:  TRKHTFQAAYLKSEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEV
           +T     LK  A  W  F+  R +P+TH  TV++DRVLL ++IL  +S+++ +I   E+
Subjt:  TRKHTFQAAYLKSEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEV

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]5.1e-1432.5Show/hide
Query:  VRFVNNLARAKYQEVLKCDFL-FERGFGSD-------LPGFLESGIANLGWRQFCAKPVPVNANIVREFYANLDD------------------FPHAVF-
        V+F    A  +Y+  ++   L  E+GF  D       LP F+   I    W+QFCA P      +VREFYANL D                    +AVF 
Subjt:  VRFVNNLARAKYQEVLKCDFL-FERGFGSD-------LPGFLESGIANLGWRQFCAKPVPVNANIVREFYANLDD------------------FPHAVF-

Query:  --------NEMMVAPSSDQLSVAVREVGIEGAQWRVSQTRKHTFQAAYLKSEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEV
                +E +   +   L   +  V + GA+W VS    +T   + L   A  W  F++  LLPTTH  TVS+DR+LL  ++L   SI+VG++I SE+
Subjt:  --------NEMMVAPSSDQLSVAVREVGIEGAQWRVSQTRKHTFQAAYLKSEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEV

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]5.1e-1433Show/hide
Query:  VRFVNNLARAKYQEVLKCDFL-FERGFGSD-------LPGFLESGIANLGWRQFCAKPVPVNANIVREFYANLDD------------------FPHAVF-
        V+F    A  +Y+  ++   L  E+GF  D       LP F+   I    W+QFCA P      +VREFYANL D                    +AVF 
Subjt:  VRFVNNLARAKYQEVLKCDFL-FERGFGSD-------LPGFLESGIANLGWRQFCAKPVPVNANIVREFYANLDD------------------FPHAVF-

Query:  --------NEMMVAPSSDQLSVAVREVGIEGAQWRVSQTRKHTFQAAYLKSEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEV
                +E +   +   L   +  V   GA+W VS    +T   + L   A  W  F++ RLLPTTH  TVS+DR+LL  ++L   SI+VG++I SE+
Subjt:  --------NEMMVAPSSDQLSVAVREVGIEGAQWRVSQTRKHTFQAAYLKSEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEV

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]3.3e-1328.71Show/hide
Query:  VRFVNNLARAKYQE-------VLKCDFLFERGFGSDLPGFLESGIANLGWRQFCAKPVPVNANIVREFYANL----DDF---------------------
        V+F +  A  +Y+E        ++ +F+++     + P F+   I    W+ FCA P      +VREFY N+    DD                      
Subjt:  VRFVNNLARAKYQE-------VLKCDFLFERGFGSDLPGFLESGIANLGWRQFCAKPVPVNANIVREFYANL----DDF---------------------

Query:  -----PHAVFNEMMVAPSSDQLSVAVREVGIEGAQWRVSQTRKHTFQAAYLKSEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISS
              H+ F E +  P   +L + +  V I GA+W VS    +T   + L   A  W  F++ RLLPTTH  TVS++ V L +++L   SI+VG++I  
Subjt:  -----PHAVFNEMMVAPSSDQLSVAVREVGIEGAQWRVSQTRKHTFQAAYLKSEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISS

Query:  EV
        E+
Subjt:  EV

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.5e-1432.5Show/hide
Query:  VRFVNNLARAKYQEVLKCDFL-FERGFGSD-------LPGFLESGIANLGWRQFCAKPVPVNANIVREFYANLDD------------------FPHAVF-
        V+F    A  +Y+  ++   L  E+GF  D       LP F+   I    W+QFCA P      +VREFYANL D                    +AVF 
Subjt:  VRFVNNLARAKYQEVLKCDFL-FERGFGSD-------LPGFLESGIANLGWRQFCAKPVPVNANIVREFYANLDD------------------FPHAVF-

Query:  --------NEMMVAPSSDQLSVAVREVGIEGAQWRVSQTRKHTFQAAYLKSEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEV
                +E +   +   L   +  V + GA+W VS    +T   + L   A  W  F++  LLPTTH  TVS+DR+LL  ++L   SI+VG++I SE+
Subjt:  --------NEMMVAPSSDQLSVAVREVGIEGAQWRVSQTRKHTFQAAYLKSEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEV

A0A2P5BCG4 Uncharacterized protein (Fragment)2.5e-1433Show/hide
Query:  VRFVNNLARAKYQEVLKCDFL-FERGFGSD-------LPGFLESGIANLGWRQFCAKPVPVNANIVREFYANLDD------------------FPHAVF-
        V+F    A  +Y+  ++   L  E+GF  D       LP F+   I    W+QFCA P      +VREFYANL D                    +AVF 
Subjt:  VRFVNNLARAKYQEVLKCDFL-FERGFGSD-------LPGFLESGIANLGWRQFCAKPVPVNANIVREFYANLDD------------------FPHAVF-

Query:  --------NEMMVAPSSDQLSVAVREVGIEGAQWRVSQTRKHTFQAAYLKSEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEV
                +E +   +   L   +  V   GA+W VS    +T   + L   A  W  F++ RLLPTTH  TVS+DR+LL  ++L   SI+VG++I SE+
Subjt:  --------NEMMVAPSSDQLSVAVREVGIEGAQWRVSQTRKHTFQAAYLKSEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEV

A0A2P5DAQ2 Uncharacterized protein1.6e-1328.71Show/hide
Query:  VRFVNNLARAKYQE-------VLKCDFLFERGFGSDLPGFLESGIANLGWRQFCAKPVPVNANIVREFYANL----DDF---------------------
        V+F +  A  +Y+E        ++ +F+++     + P F+   I    W+ FCA P      +VREFY N+    DD                      
Subjt:  VRFVNNLARAKYQE-------VLKCDFLFERGFGSDLPGFLESGIANLGWRQFCAKPVPVNANIVREFYANL----DDF---------------------

Query:  -----PHAVFNEMMVAPSSDQLSVAVREVGIEGAQWRVSQTRKHTFQAAYLKSEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISS
              H+ F E +  P   +L + +  V I GA+W VS    +T   + L   A  W  F++ RLLPTTH  TVS++ V L +++L   SI+VG++I  
Subjt:  -----PHAVFNEMMVAPSSDQLSVAVREVGIEGAQWRVSQTRKHTFQAAYLKSEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISS

Query:  EV
        E+
Subjt:  EV

W9QTD9 Uncharacterized protein5.9e-1634.57Show/hide
Query:  PGFLESGIANLGWRQFCAKPVPVNANIVREFYANLDDF-PHAVFNEMMVAP--------------------------SSDQLSVAVREVGIEGAQWRVSQ
        P F+   I   GWRQFC  P      +VREFYANL DF    VF + +  P                          + +QL V + EV IEGA W++S 
Subjt:  PGFLESGIANLGWRQFCAKPVPVNANIVREFYANLDDF-PHAVFNEMMVAP--------------------------SSDQLSVAVREVGIEGAQWRVSQ

Query:  TRKHTFQAAYLKSEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEV
           +T     LK  A  W  F+  R +P+TH  TV++DRVLL ++IL  +S+++ +I   E+
Subjt:  TRKHTFQAAYLKSEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEV

W9RBS1 Uncharacterized protein1.3e-1529.17Show/hide
Query:  AGASSETGEIEEPRLPFVRFVNNLARAKYQE-VLKCDFLFERGF------GSDLPGFLESGIANLGWRQFCAKPVPVNANIVREFYANLDD---------
        A  SS T ++   R    +FV+N A  +Y+E +   + + E+GF          PGF+   I + GW+ FC  P+     +V+EFYANL +         
Subjt:  AGASSETGEIEEPRLPFVRFVNNLARAKYQE-VLKCDFLFERGF------GSDLPGFLESGIANLGWRQFCAKPVPVNANIVREFYANLDD---------

Query:  -----FPHAVFNEMMVAPSSD-------------QLSVAVREVGIEGAQWRVSQTRKHTFQAAYLKSEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAI
             F     N ++  P+ D             QL   ++ + I GAQW +S    +T     L+  A  W  F+  RLL +TH  T+SR+R +L +A+
Subjt:  -----FPHAVFNEMMVAPSSD-------------QLSVAVREVGIEGAQWRVSQTRKHTFQAAYLKSEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAI

Query:  LRSMSIDVGKIISSEV
        L    I+VG++I  ++
Subjt:  LRSMSIDVGKIISSEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGAGCTGCCCAGACGTCACCGAATTAAGTGGAAAGCCGGCCGTATTCTGGTAGTACGAACTGATACCCCCTCGCCTCCGACTACTGACTCTGAAAAAGACAATAT
AGAGAGAGAGGAACAAGAGAGGAAGGAAGTTGAAGAGAAGACGAGAGAGGAAGAAGCAAAAAGGGTTGAGGAAGAGATTCTGCCCAATCGAAGAGAAGACAAGGGCAAAG
GCATTGCTGGGGCATCGAGTGAGACTGGCGAGATTGAGGAACCAAGGTTGCCTTTTGTTCGCTTCGTCAACAACCTTGCTCGAGCAAAATACCAGGAGGTGCTGAAATGT
GACTTCTTGTTCGAACGAGGATTTGGCAGTGATTTACCCGGGTTCTTAGAGTCTGGAATAGCAAACCTTGGGTGGAGGCAGTTTTGTGCAAAACCGGTACCTGTCAATGC
CAACATTGTTCGAGAATTTTACGCTAATCTTGACGATTTTCCGCATGCAGTTTTTAATGAAATGATGGTTGCACCATCAAGCGACCAATTAAGTGTGGCTGTCCGAGAGG
TGGGCATTGAGGGGGCTCAATGGAGGGTGTCACAGACACGAAAGCACACGTTTCAAGCTGCTTATTTGAAGAGTGAAGCCAACACTTGGATGGGTTTCATTAGGCTACGT
TTACTGCCGACAACACACGACTCCACAGTATCTCGGGATCGGGTATTACTTGCCTTTGCCATTCTTCGCTCGATGAGTATTGATGTAGGAAAAATAATTTCTTCTGAGGT
TGTTGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGAGCTGCCCAGACGTCACCGAATTAAGTGGAAAGCCGGCCGTATTCTGGTAGTACGAACTGATACCCCCTCGCCTCCGACTACTGACTCTGAAAAAGACAATAT
AGAGAGAGAGGAACAAGAGAGGAAGGAAGTTGAAGAGAAGACGAGAGAGGAAGAAGCAAAAAGGGTTGAGGAAGAGATTCTGCCCAATCGAAGAGAAGACAAGGGCAAAG
GCATTGCTGGGGCATCGAGTGAGACTGGCGAGATTGAGGAACCAAGGTTGCCTTTTGTTCGCTTCGTCAACAACCTTGCTCGAGCAAAATACCAGGAGGTGCTGAAATGT
GACTTCTTGTTCGAACGAGGATTTGGCAGTGATTTACCCGGGTTCTTAGAGTCTGGAATAGCAAACCTTGGGTGGAGGCAGTTTTGTGCAAAACCGGTACCTGTCAATGC
CAACATTGTTCGAGAATTTTACGCTAATCTTGACGATTTTCCGCATGCAGTTTTTAATGAAATGATGGTTGCACCATCAAGCGACCAATTAAGTGTGGCTGTCCGAGAGG
TGGGCATTGAGGGGGCTCAATGGAGGGTGTCACAGACACGAAAGCACACGTTTCAAGCTGCTTATTTGAAGAGTGAAGCCAACACTTGGATGGGTTTCATTAGGCTACGT
TTACTGCCGACAACACACGACTCCACAGTATCTCGGGATCGGGTATTACTTGCCTTTGCCATTCTTCGCTCGATGAGTATTGATGTAGGAAAAATAATTTCTTCTGAGGT
TGTTGACTGA
Protein sequenceShow/hide protein sequence
MSELPRRHRIKWKAGRILVVRTDTPSPPTTDSEKDNIEREEQERKEVEEKTREEEAKRVEEEILPNRREDKGKGIAGASSETGEIEEPRLPFVRFVNNLARAKYQEVLKC
DFLFERGFGSDLPGFLESGIANLGWRQFCAKPVPVNANIVREFYANLDDFPHAVFNEMMVAPSSDQLSVAVREVGIEGAQWRVSQTRKHTFQAAYLKSEANTWMGFIRLR
LLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEVVD