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Lag0025753 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025753
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioncentromere protein C-like isoform X3
Genome locationchr10:19404619..19408354
RNA-Seq ExpressionLag0025753
SyntenyLag0025753
Gene Ontology termsGO:0051382 - kinetochore assembly (biological process)
GO:0000776 - kinetochore (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0019237 - centromeric DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149945.1 uncharacterized protein LOC101215147 [Cucumis sativus]2.2e-2672.63Show/hide
Query:  MASDSNFWLPPNFLSDHDTLPGKPTSVAAFPTDFPYDFSPSVVDSPVESVLGSNETDSTARNDDDEEDFLATLTQRLTQSTLRDSQKLVSVHKSQ
        MASDS F+LPP+FLSDHD LP KPTS A FPTDFPYDF+ S V SPV+SVLG ++       +DDE+DFLA LTQRLTQSTLRDSQKL SVHKSQ
Subjt:  MASDSNFWLPPNFLSDHDTLPGKPTSVAAFPTDFPYDFSPSVVDSPVESVLGSNETDSTARNDDDEEDFLATLTQRLTQSTLRDSQKLVSVHKSQ

XP_008464895.1 PREDICTED: uncharacterized protein LOC103502654 [Cucumis melo]2.2e-2672.63Show/hide
Query:  MASDSNFWLPPNFLSDHDTLPGKPTSVAAFPTDFPYDFSPSVVDSPVESVLGSNETDSTARNDDDEEDFLATLTQRLTQSTLRDSQKLVSVHKSQ
        MASDS F+LPP+FLSDHD LP KPTS A FPTDFPYDF+ S V SPV+SVLG ++       +DDE+DFLA LTQRLTQSTLRDSQKL SVHKSQ
Subjt:  MASDSNFWLPPNFLSDHDTLPGKPTSVAAFPTDFPYDFSPSVVDSPVESVLGSNETDSTARNDDDEEDFLATLTQRLTQSTLRDSQKLVSVHKSQ

XP_038893422.1 uncharacterized protein LOC120082215 [Benincasa hispida]1.5e-2776.04Show/hide
Query:  MASDSNFWLPPNFLSDHDTLPGKPTS-VAAFPTDFPYDFSPSVVDSPVESVLGSNETDSTARNDDDEEDFLATLTQRLTQSTLRDSQKLVSVHKSQ
        MASDSNFWLPP+FLSDHD LPG PTS  AAFPTDFPYDF+ S V SPV+SVLG         +D+DEEDFLA LTQRLTQSTLRDSQKL SVHKSQ
Subjt:  MASDSNFWLPPNFLSDHDTLPGKPTS-VAAFPTDFPYDFSPSVVDSPVESVLGSNETDSTARNDDDEEDFLATLTQRLTQSTLRDSQKLVSVHKSQ

XP_038896840.1 centromere protein C isoform X1 [Benincasa hispida]1.3e-2678.95Show/hide
Query:  HLR--VSRSPSKLIEQA-TILDGNSNLMQYEAATFLVNNEKKEKNCSIKVEENPQERRPALNQKRARFSLKLDARKPPVNLEPTFASKQLKDSEE
        HL+  VSRSPSKLIEQA +ILDGNSNLMQ EAATFLV NEK E+  ++K EENPQERRPALN+KRARFSLK DAR+PPVNLEPTF  KQLKD EE
Subjt:  HLR--VSRSPSKLIEQA-TILDGNSNLMQYEAATFLVNNEKKEKNCSIKVEENPQERRPALNQKRARFSLKLDARKPPVNLEPTFASKQLKDSEE

XP_038896841.1 centromere protein C isoform X2 [Benincasa hispida]1.3e-2678.95Show/hide
Query:  HLR--VSRSPSKLIEQA-TILDGNSNLMQYEAATFLVNNEKKEKNCSIKVEENPQERRPALNQKRARFSLKLDARKPPVNLEPTFASKQLKDSEE
        HL+  VSRSPSKLIEQA +ILDGNSNLMQ EAATFLV NEK E+  ++K EENPQERRPALN+KRARFSLK DAR+PPVNLEPTF  KQLKD EE
Subjt:  HLR--VSRSPSKLIEQA-TILDGNSNLMQYEAATFLVNNEKKEKNCSIKVEENPQERRPALNQKRARFSLKLDARKPPVNLEPTFASKQLKDSEE

TrEMBL top hitse value%identityAlignment
A0A0A0KQD2 Uncharacterized protein1.0e-2672.63Show/hide
Query:  MASDSNFWLPPNFLSDHDTLPGKPTSVAAFPTDFPYDFSPSVVDSPVESVLGSNETDSTARNDDDEEDFLATLTQRLTQSTLRDSQKLVSVHKSQ
        MASDS F+LPP+FLSDHD LP KPTS A FPTDFPYDF+ S V SPV+SVLG ++       +DDE+DFLA LTQRLTQSTLRDSQKL SVHKSQ
Subjt:  MASDSNFWLPPNFLSDHDTLPGKPTSVAAFPTDFPYDFSPSVVDSPVESVLGSNETDSTARNDDDEEDFLATLTQRLTQSTLRDSQKLVSVHKSQ

A0A1S3CN19 uncharacterized protein LOC1035026541.0e-2672.63Show/hide
Query:  MASDSNFWLPPNFLSDHDTLPGKPTSVAAFPTDFPYDFSPSVVDSPVESVLGSNETDSTARNDDDEEDFLATLTQRLTQSTLRDSQKLVSVHKSQ
        MASDS F+LPP+FLSDHD LP KPTS A FPTDFPYDF+ S V SPV+SVLG ++       +DDE+DFLA LTQRLTQSTLRDSQKL SVHKSQ
Subjt:  MASDSNFWLPPNFLSDHDTLPGKPTSVAAFPTDFPYDFSPSVVDSPVESVLGSNETDSTARNDDDEEDFLATLTQRLTQSTLRDSQKLVSVHKSQ

A0A5A7UBI2 WAS/WASL-interacting protein family member 2, putative isoform 11.0e-2672.63Show/hide
Query:  MASDSNFWLPPNFLSDHDTLPGKPTSVAAFPTDFPYDFSPSVVDSPVESVLGSNETDSTARNDDDEEDFLATLTQRLTQSTLRDSQKLVSVHKSQ
        MASDS F+LPP+FLSDHD LP KPTS A FPTDFPYDF+ S V SPV+SVLG ++       +DDE+DFLA LTQRLTQSTLRDSQKL SVHKSQ
Subjt:  MASDSNFWLPPNFLSDHDTLPGKPTSVAAFPTDFPYDFSPSVVDSPVESVLGSNETDSTARNDDDEEDFLATLTQRLTQSTLRDSQKLVSVHKSQ

A0A6J1JV01 centromere protein C-like isoform X31.5e-2576.84Show/hide
Query:  HLR--VSRSPSKLIEQA-TILDGNSNLMQYEAATFLVNNEKKEKNCSIKVEENPQERRPALNQKRARFSLKLDARKPPVNLEPTFASKQLKDSEE
        HL+  VSR+PSKLIEQA +IL+GNSNLMQ +AATFLV NEKKE+  +  VEENPQERRPALN+KRARFSLK DAR+PPVNLEPTF  KQLKD EE
Subjt:  HLR--VSRSPSKLIEQA-TILDGNSNLMQYEAATFLVNNEKKEKNCSIKVEENPQERRPALNQKRARFSLKLDARKPPVNLEPTFASKQLKDSEE

A0A6J1JYG6 centromere protein C-like isoform X11.5e-2576.84Show/hide
Query:  HLR--VSRSPSKLIEQA-TILDGNSNLMQYEAATFLVNNEKKEKNCSIKVEENPQERRPALNQKRARFSLKLDARKPPVNLEPTFASKQLKDSEE
        HL+  VSR+PSKLIEQA +IL+GNSNLMQ +AATFLV NEKKE+  +  VEENPQERRPALN+KRARFSLK DAR+PPVNLEPTF  KQLKD EE
Subjt:  HLR--VSRSPSKLIEQA-TILDGNSNLMQYEAATFLVNNEKKEKNCSIKVEENPQERRPALNQKRARFSLKLDARKPPVNLEPTFASKQLKDSEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48650.1 DEA(D/H)-box RNA helicase family protein8.5e-0571.43Show/hide
Query:  LKDSEESLCLQINSLQLDSISEFLSNALQPPEPLS
        L+   +SLCLQI SL L SISEFLS ALQPPE LS
Subjt:  LKDSEESLCLQINSLQLDSISEFLSNALQPPEPLS

AT1G48650.2 DEA(D/H)-box RNA helicase family protein8.5e-0571.43Show/hide
Query:  LKDSEESLCLQINSLQLDSISEFLSNALQPPEPLS
        L+   +SLCLQI SL L SISEFLS ALQPPE LS
Subjt:  LKDSEESLCLQINSLQLDSISEFLSNALQPPEPLS

AT3G54000.2 unknown protein2.5e-0436.47Show/hide
Query:  MASDSNFWLPPNFLSDHDTLPGKP-TSVAAFPTDFPYDFSPSVVDSPVESVLGSNETDSTARNDDDEEDFLATLTQRLTQSTLRD
        +  D+ FWLP  FL+D D L  K   SV    + FPY+              GS    +T + +DDEE FLA LT+++  S+L+D
Subjt:  MASDSNFWLPPNFLSDHDTLPGKP-TSVAAFPTDFPYDFSPSVVDSPVESVLGSNETDSTARNDDDEEDFLATLTQRLTQSTLRD

AT3G54000.3 unknown protein2.5e-0436.47Show/hide
Query:  MASDSNFWLPPNFLSDHDTLPGKP-TSVAAFPTDFPYDFSPSVVDSPVESVLGSNETDSTARNDDDEEDFLATLTQRLTQSTLRD
        +  D+ FWLP  FL+D D L  K   SV    + FPY+              GS    +T + +DDEE FLA LT+++  S+L+D
Subjt:  MASDSNFWLPPNFLSDHDTLPGKP-TSVAAFPTDFPYDFSPSVVDSPVESVLGSNETDSTARNDDDEEDFLATLTQRLTQSTLRD

AT3G55690.1 unknown protein2.5e-0436.26Show/hide
Query:  LPPNFLSDHDTLPGKPTSVAAFPTDFPYDFSPSVVDSPVESVLGSNETDSTARNDDDEEDFLATLTQRLTQSTLRDSQKLVSVHKSQFIAK
        LPP F +  +    +P     FP +FPY+F+ S   +  E     + T++     DDE+DFLA LT+RL  ST R S       KSQ   K
Subjt:  LPPNFLSDHDTLPGKPTSVAAFPTDFPYDFSPSVVDSPVESVLGSNETDSTARNDDDEEDFLATLTQRLTQSTLRDSQKLVSVHKSQFIAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCTGATTCCAATTTCTGGCTTCCTCCCAACTTTTTATCCGACCACGACACCCTCCCCGGAAAACCCACCTCCGTCGCCGCCTTCCCCACCGACTTCCCT
TATGACTTCAGCCCCTCTGTCGTTGATTCTCCAGTCGAATCTGTCCTTGGCTCCAACGAGACCGACAGCACCGCCAGAAACGACGATGACGAGGAAGACTTTCTC
GCTACGTTGACGCAGCGGCTTACTCAGTCCACCCTTCGTGATTCTCAAAAACTTGTTTCTGTCCACAAATCCCAATTCATCGCAAAGGAAGAAACGGAGATTTTT
GTTTCCCTACACTTGCGCGTCTCAAGAAGTCCTAGTAAACTTATAGAGCAGGCCACAATTTTAGACGGTAACTCAAATTTGATGCAATATGAAGCTGCCACATTT
CTTGTAAACAACGAGAAAAAGGAAAAAAACTGCAGCATAAAGGTGGAGGAAAATCCACAAGAAAGAAGGCCAGCCTTAAACCAAAAGAGGGCTAGGTTTTCTTTA
AAACTTGATGCTAGGAAACCTCCTGTGAACTTGGAACCAACATTTGCCAGTAAACAATTGAAAGACTCCGAAGAGTCTTTGTGTTTGCAAATCAATAGTCTGCAA
CTTGACAGTATATCAGAGTTCTTATCAAATGCATTACAGCCGCCAGAACCTTTATCAAACAAAGAGAAATCAGTTGCTTTGAAAACAATGGTGGATGGCCAGGTT
ATGCTGTATTCGTGCAAGGTAGCTCAAGATCCCTGCAACCTTGGTTCTGCGTTATCTTTGAAGGAGGGAGATCATCCTCTCCAATTTATTCTCAAGAGTTCTAGG
TAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCTGATTCCAATTTCTGGCTTCCTCCCAACTTTTTATCCGACCACGACACCCTCCCCGGAAAACCCACCTCCGTCGCCGCCTTCCCCACCGACTTCCCT
TATGACTTCAGCCCCTCTGTCGTTGATTCTCCAGTCGAATCTGTCCTTGGCTCCAACGAGACCGACAGCACCGCCAGAAACGACGATGACGAGGAAGACTTTCTC
GCTACGTTGACGCAGCGGCTTACTCAGTCCACCCTTCGTGATTCTCAAAAACTTGTTTCTGTCCACAAATCCCAATTCATCGCAAAGGAAGAAACGGAGATTTTT
GTTTCCCTACACTTGCGCGTCTCAAGAAGTCCTAGTAAACTTATAGAGCAGGCCACAATTTTAGACGGTAACTCAAATTTGATGCAATATGAAGCTGCCACATTT
CTTGTAAACAACGAGAAAAAGGAAAAAAACTGCAGCATAAAGGTGGAGGAAAATCCACAAGAAAGAAGGCCAGCCTTAAACCAAAAGAGGGCTAGGTTTTCTTTA
AAACTTGATGCTAGGAAACCTCCTGTGAACTTGGAACCAACATTTGCCAGTAAACAATTGAAAGACTCCGAAGAGTCTTTGTGTTTGCAAATCAATAGTCTGCAA
CTTGACAGTATATCAGAGTTCTTATCAAATGCATTACAGCCGCCAGAACCTTTATCAAACAAAGAGAAATCAGTTGCTTTGAAAACAATGGTGGATGGCCAGGTT
ATGCTGTATTCGTGCAAGGTAGCTCAAGATCCCTGCAACCTTGGTTCTGCGTTATCTTTGAAGGAGGGAGATCATCCTCTCCAATTTATTCTCAAGAGTTCTAGG
TAG
Protein sequenceShow/hide protein sequence
MASDSNFWLPPNFLSDHDTLPGKPTSVAAFPTDFPYDFSPSVVDSPVESVLGSNETDSTARNDDDEEDFLATLTQRLTQSTLRDSQKLVSVHKSQFIAKEETEIF
VSLHLRVSRSPSKLIEQATILDGNSNLMQYEAATFLVNNEKKEKNCSIKVEENPQERRPALNQKRARFSLKLDARKPPVNLEPTFASKQLKDSEESLCLQINSLQ
LDSISEFLSNALQPPEPLSNKEKSVALKTMVDGQVMLYSCKVAQDPCNLGSALSLKEGDHPLQFILKSSR