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Lag0025759 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025759
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:19732532..19738288
RNA-Seq ExpressionLag0025759
SyntenyLag0025759
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0016779 - nucleotidyltransferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052217.1 hypothetical protein E6C27_scaffold207G00280 [Cucumis melo var. makuwa]5.7e-1150.53Show/hide
Query:  ISIDYMNEILSPRLYGTVCTQ-----------------VEIELPMPDTLPMSAESSKSSSSSTFQEGQRVSLEDDDVRWLHAIFRTELAGGPGGG
        +SIDY+ EILS RLYGTVCTQ                 VEIEL +PDTLP SAESS+S S S         +  DDV WLH +FR +  GGPG G
Subjt:  ISIDYMNEILSPRLYGTVCTQ-----------------VEIELPMPDTLPMSAESSKSSSSSTFQEGQRVSLEDDDVRWLHAIFRTELAGGPGGG

KAA0066851.1 reverse transcriptase [Cucumis melo var. makuwa]4.7e-1352Show/hide
Query:  MNEILSPRLYGTVCTQ-----------------VEIELPMPDTLPMSAESSKSSSSS---TFQEGQRVSL-------EDDDVRWLHAIFRTELAGGPGGG
        M EILSPRLYGTVCTQ                 VEIELP+PDTLP SAESS+S+SS+    + E   V +        +DDV WLHA+FR + AGGPGGG
Subjt:  MNEILSPRLYGTVCTQ-----------------VEIELPMPDTLPMSAESSKSSSSS---TFQEGQRVSL-------EDDDVRWLHAIFRTELAGGPGGG

TYK00848.1 gag/pol protein [Cucumis melo var. makuwa]2.0e-1151.02Show/hide
Query:  DGVKISIDYMNEILSPRLYGTVCTQ-----------------VEIELPMPDTLPMSAESSKSSSSSTFQEGQRVSLEDDDVRWLHAIFRTELAGGPGG
        D  ++SI YM EILS RLYG VCTQ                 VEIEL +PDTLP SAES +S+S S         +  DDV WLHAIFR + AGGPGG
Subjt:  DGVKISIDYMNEILSPRLYGTVCTQ-----------------VEIELPMPDTLPMSAESSKSSSSSTFQEGQRVSLEDDDVRWLHAIFRTELAGGPGG

TYK01784.1 hypothetical protein E5676_scaffold113G00120 [Cucumis melo var. makuwa]5.7e-1150.53Show/hide
Query:  ISIDYMNEILSPRLYGTVCTQ-----------------VEIELPMPDTLPMSAESSKSSSSSTFQEGQRVSLEDDDVRWLHAIFRTELAGGPGGG
        +SIDY+ EILS RLYGTVCTQ                 VEIEL +PDTLP SAESS+S S S         +  DDV WLH +FR +  GGPG G
Subjt:  ISIDYMNEILSPRLYGTVCTQ-----------------VEIELPMPDTLPMSAESSKSSSSSTFQEGQRVSLEDDDVRWLHAIFRTELAGGPGGG

TYK27998.1 reverse transcriptase [Cucumis melo var. makuwa]4.7e-1352Show/hide
Query:  MNEILSPRLYGTVCTQ-----------------VEIELPMPDTLPMSAESSKSSSSS---TFQEGQRVSL-------EDDDVRWLHAIFRTELAGGPGGG
        M EILSPRLYGTVCTQ                 VEIELP+PDTLP SAESS+S+SS+    + E   V +        +DDV WLHA+FR + AGGPGGG
Subjt:  MNEILSPRLYGTVCTQ-----------------VEIELPMPDTLPMSAESSKSSSSS---TFQEGQRVSL-------EDDDVRWLHAIFRTELAGGPGGG

TrEMBL top hitse value%identityAlignment
A0A5A7UCL6 Reverse transcriptase domain-containing protein2.8e-1150.53Show/hide
Query:  ISIDYMNEILSPRLYGTVCTQ-----------------VEIELPMPDTLPMSAESSKSSSSSTFQEGQRVSLEDDDVRWLHAIFRTELAGGPGGG
        +SIDY+ EILS RLYGTVCTQ                 VEIEL +PDTLP SAESS+S S S         +  DDV WLH +FR +  GGPG G
Subjt:  ISIDYMNEILSPRLYGTVCTQ-----------------VEIELPMPDTLPMSAESSKSSSSSTFQEGQRVSLEDDDVRWLHAIFRTELAGGPGGG

A0A5A7VMG9 Reverse transcriptase2.3e-1352Show/hide
Query:  MNEILSPRLYGTVCTQ-----------------VEIELPMPDTLPMSAESSKSSSSS---TFQEGQRVSL-------EDDDVRWLHAIFRTELAGGPGGG
        M EILSPRLYGTVCTQ                 VEIELP+PDTLP SAESS+S+SS+    + E   V +        +DDV WLHA+FR + AGGPGGG
Subjt:  MNEILSPRLYGTVCTQ-----------------VEIELPMPDTLPMSAESSKSSSSS---TFQEGQRVSL-------EDDDVRWLHAIFRTELAGGPGGG

A0A5D3BP54 Gag/pol protein9.5e-1251.02Show/hide
Query:  DGVKISIDYMNEILSPRLYGTVCTQ-----------------VEIELPMPDTLPMSAESSKSSSSSTFQEGQRVSLEDDDVRWLHAIFRTELAGGPGG
        D  ++SI YM EILS RLYG VCTQ                 VEIEL +PDTLP SAES +S+S S         +  DDV WLHAIFR + AGGPGG
Subjt:  DGVKISIDYMNEILSPRLYGTVCTQ-----------------VEIELPMPDTLPMSAESSKSSSSSTFQEGQRVSLEDDDVRWLHAIFRTELAGGPGG

A0A5D3BRJ2 Reverse transcriptase domain-containing protein2.8e-1150.53Show/hide
Query:  ISIDYMNEILSPRLYGTVCTQ-----------------VEIELPMPDTLPMSAESSKSSSSSTFQEGQRVSLEDDDVRWLHAIFRTELAGGPGGG
        +SIDY+ EILS RLYGTVCTQ                 VEIEL +PDTLP SAESS+S S S         +  DDV WLH +FR +  GGPG G
Subjt:  ISIDYMNEILSPRLYGTVCTQ-----------------VEIELPMPDTLPMSAESSKSSSSSTFQEGQRVSLEDDDVRWLHAIFRTELAGGPGGG

A0A5D3DX39 Reverse transcriptase2.3e-1352Show/hide
Query:  MNEILSPRLYGTVCTQ-----------------VEIELPMPDTLPMSAESSKSSSSS---TFQEGQRVSL-------EDDDVRWLHAIFRTELAGGPGGG
        M EILSPRLYGTVCTQ                 VEIELP+PDTLP SAESS+S+SS+    + E   V +        +DDV WLHA+FR + AGGPGGG
Subjt:  MNEILSPRLYGTVCTQ-----------------VEIELPMPDTLPMSAESSKSSSSS---TFQEGQRVSL-------EDDDVRWLHAIFRTELAGGPGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTGTTTTCTCTCTGTTTATGGCTCCAAAAACGTCGAGACACTGTCAAGACAGCGTCTCGACGCTACCTTCAAAACGTGCGTTTCTGGAAAGGAAAACTCGCAGCG
TCGAGACGCTAAGGTTGCAACGTCGAGACGCTGTGACCTTTTAGCGCCTATTCGGATATGGAATGCCAGTGTCGAGACGCTCAAGGAGCAGCGTCTCGACGCTGGTGTGC
TTGTCGTACCTAGAATATCTCCATCTGACCATGAAGGAAGAGATCTTATAGCTGCAATCACCACTCCATCAACAAATGATCCAGGTCCTGCATATATACAAGGGAATTTG
ACTGAAGCTGCCAATGACAGAGGCATATCCAAACGGCAAAAGAGCCATGGAATCTTCATCTTAATGAAGTTGAAACCCCCAAAAACTCAAATCCAGACCCAAATGATTCA
AAATGCCTCGAGAAGAAGGTCCAAACGGCAGATCCAGGTCGACACAGATGGAAGAGGAGTCGGAAAGGCCCAAAAACGCCTCAAGAAGAAGGTCCATCTAAGTGAAGGTC
GATATTCTAGATTATGCGATGGACTTGGTCGCTTCGCCATGGATGATGGAGTCAAGATTTCCATTGACTACATGAATGAGATATTGAGCCCGAGGCTATATGGTACCGTG
TGCACACAGGTAGAGATCGAGCTCCCGATGCCTGATACACTGCCAATGTCTGCTGAAAGTTCCAAATCAAGCTCCAGTTCAACGTTTCAGGAGGGTCAACGGGTATCGTT
AGAGGATGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTGAGTTAGCAGGTGGTCCGGGAGGGGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTGTTTTCTCTCTGTTTATGGCTCCAAAAACGTCGAGACACTGTCAAGACAGCGTCTCGACGCTACCTTCAAAACGTGCGTTTCTGGAAAGGAAAACTCGCAGCG
TCGAGACGCTAAGGTTGCAACGTCGAGACGCTGTGACCTTTTAGCGCCTATTCGGATATGGAATGCCAGTGTCGAGACGCTCAAGGAGCAGCGTCTCGACGCTGGTGTGC
TTGTCGTACCTAGAATATCTCCATCTGACCATGAAGGAAGAGATCTTATAGCTGCAATCACCACTCCATCAACAAATGATCCAGGTCCTGCATATATACAAGGGAATTTG
ACTGAAGCTGCCAATGACAGAGGCATATCCAAACGGCAAAAGAGCCATGGAATCTTCATCTTAATGAAGTTGAAACCCCCAAAAACTCAAATCCAGACCCAAATGATTCA
AAATGCCTCGAGAAGAAGGTCCAAACGGCAGATCCAGGTCGACACAGATGGAAGAGGAGTCGGAAAGGCCCAAAAACGCCTCAAGAAGAAGGTCCATCTAAGTGAAGGTC
GATATTCTAGATTATGCGATGGACTTGGTCGCTTCGCCATGGATGATGGAGTCAAGATTTCCATTGACTACATGAATGAGATATTGAGCCCGAGGCTATATGGTACCGTG
TGCACACAGGTAGAGATCGAGCTCCCGATGCCTGATACACTGCCAATGTCTGCTGAAAGTTCCAAATCAAGCTCCAGTTCAACGTTTCAGGAGGGTCAACGGGTATCGTT
AGAGGATGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTGAGTTAGCAGGTGGTCCGGGAGGGGGTTAA
Protein sequenceShow/hide protein sequence
MLCFLSVYGSKNVETLSRQRLDATFKTCVSGKENSQRRDAKVATSRRCDLLAPIRIWNASVETLKEQRLDAGVLVVPRISPSDHEGRDLIAAITTPSTNDPGPAYIQGNL
TEAANDRGISKRQKSHGIFILMKLKPPKTQIQTQMIQNASRRRSKRQIQVDTDGRGVGKAQKRLKKKVHLSEGRYSRLCDGLGRFAMDDGVKISIDYMNEILSPRLYGTV
CTQVEIELPMPDTLPMSAESSKSSSSSTFQEGQRVSLEDDDVRWLHAIFRTELAGGPGGG