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Lag0025764 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025764
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr10:19801981..19803834
RNA-Seq ExpressionLag0025764
SyntenyLag0025764
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34244.1 hypothetical protein [Cucumis melo subsp. melo]2.1e-1659.77Show/hide
Query:  KKSRPSTSGFDRLKVTDDQPQRKMDNLEVKLSDEVSGDKKLQSIVPSRMKRKFYVLINTEGFLKVKPNLIILTSPINEGSELLKCKS
        KK RPSTS FDRLK+TDDQ QR+M  L+ K   E + D K+ S+VPS MKRK  V INTEG L VKP  II T+PINEG E +  K+
Subjt:  KKSRPSTSGFDRLKVTDDQPQRKMDNLEVKLSDEVSGDKKLQSIVPSRMKRKFYVLINTEGFLKVKPNLIILTSPINEGSELLKCKS

KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.8e-1662.96Show/hide
Query:  KKSRPSTSGFDRLKVTDDQPQRKMDNLEVKLSDEVSGDKKLQSIVPSRMKRKFYVLINTEGFLKVKPNLIILTSPINEGSE
        KK RPSTS FDRLK+T+DQ QR+M +L+ K   E + D K+ S VPSRMKRK  V INTEG L VKP  II T+PINEG E
Subjt:  KKSRPSTSGFDRLKVTDDQPQRKMDNLEVKLSDEVSGDKKLQSIVPSRMKRKFYVLINTEGFLKVKPNLIILTSPINEGSE

KAA0050734.1 gag protease polyprotein [Cucumis melo var. makuwa]2.8e-1664.56Show/hide
Query:  KKSRPSTSGFDRLKVTDDQPQRKMDNLEVKLSDEVSGDKKLQSIVPSRMKRKFYVLINTEGFLKVKPNLIILTSPINEG
        KK RPSTS FDRLK+T+DQ QR+M +L+ K   E +GD K+ S VPSRMKRK  V INTEG L VKP  II T+PINEG
Subjt:  KKSRPSTSGFDRLKVTDDQPQRKMDNLEVKLSDEVSGDKKLQSIVPSRMKRKFYVLINTEGFLKVKPNLIILTSPINEG

KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.8e-1660.98Show/hide
Query:  LKKSRPSTSGFDRLKVTDDQPQRKMDNLEVKLSDEVSGDKKLQSIVPSRMKRKFYVLINTEGFLKVKPNLIILTSPINEGSE
        LKK RPSTS FDRLK+T+DQ QR+M + + K   E + D K+ S VPSRMKRK +V INTEG L VKP  II T+P NEG E
Subjt:  LKKSRPSTSGFDRLKVTDDQPQRKMDNLEVKLSDEVSGDKKLQSIVPSRMKRKFYVLINTEGFLKVKPNLIILTSPINEGSE

KAA0065608.1 retrotransposon gag protein [Cucumis melo var. makuwa]6.2e-1661.73Show/hide
Query:  KKSRPSTSGFDRLKVTDDQPQRKMDNLEVKLSDEVSGDKKLQSIVPSRMKRKFYVLINTEGFLKVKPNLIILTSPINEGSE
        KK RPSTS FDRLK+T+DQ Q++M +L+ K   E +GD K+ S VPSR KRK  V INTEG L VKP  II T+PINEG E
Subjt:  KKSRPSTSGFDRLKVTDDQPQRKMDNLEVKLSDEVSGDKKLQSIVPSRMKRKFYVLINTEGFLKVKPNLIILTSPINEGSE

KAA0065608.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.9e-0570.59Show/hide
Query:  EEMERVDDPKYCKYHRVIGHPVERCFVLKDLILK
        E+  +VDDP YCKYHRVI H +E+CFVLK+LILK
Subjt:  EEMERVDDPKYCKYHRVIGHPVERCFVLKDLILK

TrEMBL top hitse value%identityAlignment
A0A5A7TQ06 Retrotransposon gag protein2.3e-1662.96Show/hide
Query:  KKSRPSTSGFDRLKVTDDQPQRKMDNLEVKLSDEVSGDKKLQSIVPSRMKRKFYVLINTEGFLKVKPNLIILTSPINEGSE
        KK RPSTS FDRLK+T+DQ QR+M +L+ K   E + D K+ S VPSRMKRK  V INTEG L VKP  II T+PINEG E
Subjt:  KKSRPSTSGFDRLKVTDDQPQRKMDNLEVKLSDEVSGDKKLQSIVPSRMKRKFYVLINTEGFLKVKPNLIILTSPINEGSE

A0A5A7URH1 Ty3-gypsy retrotransposon protein2.3e-1660.98Show/hide
Query:  LKKSRPSTSGFDRLKVTDDQPQRKMDNLEVKLSDEVSGDKKLQSIVPSRMKRKFYVLINTEGFLKVKPNLIILTSPINEGSE
        LKK RPSTS FDRLK+T+DQ QR+M + + K   E + D K+ S VPSRMKRK +V INTEG L VKP  II T+P NEG E
Subjt:  LKKSRPSTSGFDRLKVTDDQPQRKMDNLEVKLSDEVSGDKKLQSIVPSRMKRKFYVLINTEGFLKVKPNLIILTSPINEGSE

A0A5D3BBF9 Gag protease polyprotein1.3e-1664.56Show/hide
Query:  KKSRPSTSGFDRLKVTDDQPQRKMDNLEVKLSDEVSGDKKLQSIVPSRMKRKFYVLINTEGFLKVKPNLIILTSPINEG
        KK RPSTS FDRLK+T+DQ QR+M +L+ K   E +GD K+ S VPSRMKRK  V INTEG L VKP  II T+PINEG
Subjt:  KKSRPSTSGFDRLKVTDDQPQRKMDNLEVKLSDEVSGDKKLQSIVPSRMKRKFYVLINTEGFLKVKPNLIILTSPINEG

A0A5D3CA53 Retrotransposon gag protein3.0e-1661.73Show/hide
Query:  KKSRPSTSGFDRLKVTDDQPQRKMDNLEVKLSDEVSGDKKLQSIVPSRMKRKFYVLINTEGFLKVKPNLIILTSPINEGSE
        KK RPSTS FDRLK+T+DQ Q++M +L+ K   E +GD K+ S VPSR KRK  V INTEG L VKP  II T+PINEG E
Subjt:  KKSRPSTSGFDRLKVTDDQPQRKMDNLEVKLSDEVSGDKKLQSIVPSRMKRKFYVLINTEGFLKVKPNLIILTSPINEGSE

A0A5D3CA53 Retrotransposon gag protein2.4e-0570.59Show/hide
Query:  EEMERVDDPKYCKYHRVIGHPVERCFVLKDLILK
        E+  +VDDP YCKYHRVI H +E+CFVLK+LILK
Subjt:  EEMERVDDPKYCKYHRVIGHPVERCFVLKDLILK

E5GCP7 Uncharacterized protein1.0e-1659.77Show/hide
Query:  KKSRPSTSGFDRLKVTDDQPQRKMDNLEVKLSDEVSGDKKLQSIVPSRMKRKFYVLINTEGFLKVKPNLIILTSPINEGSELLKCKS
        KK RPSTS FDRLK+TDDQ QR+M  L+ K   E + D K+ S+VPS MKRK  V INTEG L VKP  II T+PINEG E +  K+
Subjt:  KKSRPSTSGFDRLKVTDDQPQRKMDNLEVKLSDEVSGDKKLQSIVPSRMKRKFYVLINTEGFLKVKPNLIILTSPINEGSELLKCKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTAATCAAACTTAACGCCGAGTTCAACCCCGATTACAGTGATCCTCGTGAAGAGATGGAGAGAGTCGATGATCCCAAGTATTGCAAGTATCATCGAGTTATTGG
TCATCCAGTGGAAAGATGCTTCGTCCTAAAGGACTTAATTCTAAAGAAAAGTCGACCTTCAACATCTGGTTTTGATCGTCTCAAAGTAACAGACGATCAACCTCAAAGGA
AAATGGATAACTTAGAGGTGAAACTGTCTGATGAAGTAAGCGGTGACAAGAAGCTTCAGAGTATTGTCCCATCACGTATGAAAAGGAAGTTCTATGTTCTCATAAATACA
GAAGGTTTCTTGAAGGTGAAGCCAAATCTCATTATCTTGACCAGTCCTATAAATGAAGGATCTGAGCTTTTAAAATGTAAAAGCTCCTTATTGCATGAGCCTACACTGCA
TGATGCTCCTAGCCCACACGAGCTTAAAAGGGTCTTCATGAAGGATTTGGAATTCCCTAATTCCGATAAAGCGGAAGCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTAATCAAACTTAACGCCGAGTTCAACCCCGATTACAGTGATCCTCGTGAAGAGATGGAGAGAGTCGATGATCCCAAGTATTGCAAGTATCATCGAGTTATTGG
TCATCCAGTGGAAAGATGCTTCGTCCTAAAGGACTTAATTCTAAAGAAAAGTCGACCTTCAACATCTGGTTTTGATCGTCTCAAAGTAACAGACGATCAACCTCAAAGGA
AAATGGATAACTTAGAGGTGAAACTGTCTGATGAAGTAAGCGGTGACAAGAAGCTTCAGAGTATTGTCCCATCACGTATGAAAAGGAAGTTCTATGTTCTCATAAATACA
GAAGGTTTCTTGAAGGTGAAGCCAAATCTCATTATCTTGACCAGTCCTATAAATGAAGGATCTGAGCTTTTAAAATGTAAAAGCTCCTTATTGCATGAGCCTACACTGCA
TGATGCTCCTAGCCCACACGAGCTTAAAAGGGTCTTCATGAAGGATTTGGAATTCCCTAATTCCGATAAAGCGGAAGCGTAA
Protein sequenceShow/hide protein sequence
MKLIKLNAEFNPDYSDPREEMERVDDPKYCKYHRVIGHPVERCFVLKDLILKKSRPSTSGFDRLKVTDDQPQRKMDNLEVKLSDEVSGDKKLQSIVPSRMKRKFYVLINT
EGFLKVKPNLIILTSPINEGSELLKCKSSLLHEPTLHDAPSPHELKRVFMKDLEFPNSDKAEA