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Lag0025767 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025767
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:19831469..19833950
RNA-Seq ExpressionLag0025767
SyntenyLag0025767
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0009987 - cellular process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN64339.1 hypothetical protein VITISV_031562 [Vitis vinifera]6.9e-1932.56Show/hide
Query:  EPEFTNGCYTWSSFGENHYCSLIDRFLVTDVCLNKFGAAQFRRLDKVTSDHYPCILSFGDLSWDLCPFRFENSWLKIDSF---VGSWLIGGRKMPFRDGF
        +P   N  +TWS+  E+  C  +DRFL ++     F       L + TSDH+P ++      W   PFRFEN WL+  +F     +W  G +     D  
Subjt:  EPEFTNGCYTWSSFGENHYCSLIDRFLVTDVCLNKFGAAQFRRLDKVTSDHYPCILSFGDLSWDLCPFRFENSWLKIDSF---VGSWLIGGRKMPFRDGF

Query:  LSTNVDWCPINESQSIGLEAAFSEDEVYQAVKSLGTNAILHAKGFGTVWRKWIYGCLSSVNYSIIINGRPRG
        L  N        S   G+      ++ Y   K    +  L  KGF   WRKW+ GCLSSV+Y+I++NG  +G
Subjt:  LSTNVDWCPINESQSIGLEAAFSEDEVYQAVKSLGTNAILHAKGFGTVWRKWIYGCLSSVNYSIIINGRPRG

CAN72510.1 hypothetical protein VITISV_040730 [Vitis vinifera]5.7e-1327.54Show/hide
Query:  MRNEPEFTNGCYTWSSFGENHYCSLIDRFLVTDVCLNKFGAAQFRRLDKVTSDHYPCILSFGDLSWDLCPFRFENSWLKIDSF---VGSW----------
        +R+ P  T G +TW     +   S +DRFL+ D   + F A     L ++ SDH   +L  G LS    PFRFEN WLKID F   V SW          
Subjt:  MRNEPEFTNGCYTWSSFGENHYCSLIDRFLVTDVCLNKFGAAQFRRLDKVTSDHYPCILSFGDLSWDLCPFRFENSWLKIDSF---VGSW----------

Query:  --LIGGRKMPFRDGFLSTNVD------------------W------CPINESQSIGLEAAFSEDEVYQAVKSLG-TNAILHAKGFGTVWRKWIYGCLSSV
           I  +    +    S N +                  W       P+N         A  + + +  ++     N ++   GFG  W  W+  C S+ 
Subjt:  --LIGGRKMPFRDGFLSTNVD------------------W------CPINESQSIGLEAAFSEDEVYQAVKSLG-TNAILHAKGFGTVWRKWIYGCLSSV

Query:  NYSIIINGRPRGNFQH----RNLALLAKWIWSFLHE
         +SI+ING P G F+     R   LL+ +++ F  E
Subjt:  NYSIIINGRPRGNFQH----RNLALLAKWIWSFLHE

RVW30590.1 hypothetical protein CK203_086057 [Vitis vinifera]5.9e-1831.4Show/hide
Query:  EPEFTNGCYTWSSFGENHYCSLIDRFLVTDVCLNKFGAAQFRRLDKVTSDHYPCILSFGDLSWDLCPFRFENSWLKIDSFVGSWLIGGRKMPFRDGFLST
        +P   N  +TWS+  E+  C  +DRFL ++   + F     + L + TSDH+P +L      W   PFRF+N WL+  +F         K  FR+     
Subjt:  EPEFTNGCYTWSSFGENHYCSLIDRFLVTDVCLNKFGAAQFRRLDKVTSDHYPCILSFGDLSWDLCPFRFENSWLKIDSFVGSWLIGGRKMPFRDGFLST

Query:  NVDWCPINESQSIGLEAAFSE---DEVYQAVKSLGTNAILHAKGFGTVWRKWIYGCLSSVNYSIIINGRPRG
           W  +  +   G E    +   ++ Y  V     + +L  KGF   WRKW+ GCLSSV+Y++++NG  +G
Subjt:  NVDWCPINESQSIGLEAAFSE---DEVYQAVKSLGTNAILHAKGFGTVWRKWIYGCLSSVNYSIIINGRPRG

RVW50733.1 putative ribonuclease H protein [Vitis vinifera]1.2e-1522.09Show/hide
Query:  YWLGLSQSVGAS-----GGILIMRNEPEFTNGCYTWSSFGENHYCSLIDRFLVTDVCLNKFGAAQFRRLDKVTSDHYPCILSFGDLSWDLCPFRFENSWL
        +WL L    G +      G+L    +P   N  +TWS+   +  C  +DRFL +      F  +    L + TSDH P  L    L W   PFRFEN WL
Subjt:  YWLGLSQSVGAS-----GGILIMRNEPEFTNGCYTWSSFGENHYCSLIDRFLVTDVCLNKFGAAQFRRLDKVTSDHYPCILSFGDLSWDLCPFRFENSWL

Query:  KIDSFVGSWLI--------GGRKMP-----------------------FRDGFLSTN-----------------------VDWCPINESQSIGLEAAFSE
            F   + +        GG+ +                         ++G  ++N                       +DW PI+    + L+  F+E
Subjt:  KIDSFVGSWLI--------GGRKMP-----------------------FRDGFLSTN-----------------------VDWCPINESQSIGLEAAFSE

Query:  DEVYQAVKSLG----------------------------------TNA----------------------------------------ILHAKGFGTVWR
        +EV  AV  L                                   TN                                         +L  KGF   WR
Subjt:  DEVYQAVKSLG----------------------------------TNA----------------------------------------ILHAKGFGTVWR

Query:  KWIYGCLSSVNYSIIING---------------------------------------------RPR-------GNFQHRNLALLAKWIWSFLHEDNALCH
         WI GCLSS +++I++NG                                             RP+       G    RN+ALL KW+W F  E + L H
Subjt:  KWIYGCLSSVNYSIIING---------------------------------------------RPR-------GNFQHRNLALLAKWIWSFLHEDNALCH

Query:  KLIVAKYCNSDMFCLW-PRFVQRSSHKSPW
        K+IV+ Y        W    V R SH+ PW
Subjt:  KLIVAKYCNSDMFCLW-PRFVQRSSHKSPW

RVW77863.1 hypothetical protein CK203_054361 [Vitis vinifera]1.3e-1729.82Show/hide
Query:  EPEFTNGCYTWSSFGENHYCSLIDRFLVTDVCLNKFGAAQFRRLDKVTSDHYPCILSFGDLSWDLCPFRFENSWLKIDSFVGSWLIGGRKMPFRDGFLST
        +P   N  +TWS+  E+     +DRFL ++   + F  +    L + TSDH+P +L      W   PFRFEN WL+  SF  +  +GG       G ++ 
Subjt:  EPEFTNGCYTWSSFGENHYCSLIDRFLVTDVCLNKFGAAQFRRLDKVTSDHYPCILSFGDLSWDLCPFRFENSWLKIDSFVGSWLIGGRKMPFRDGFLST

Query:  NVDWCPINESQSIGLEAAFSE---DEVYQAVKSLGTNAILHAKGFGTVWRKWIYGCLSSVNYSIIINGRPR
         +    +NE +  G E    +   ++ Y  V     + +L  KGF   WRKW+   LS+V++++++NG  +
Subjt:  NVDWCPINESQSIGLEAAFSE---DEVYQAVKSLGTNAILHAKGFGTVWRKWIYGCLSSVNYSIIINGRPR

TrEMBL top hitse value%identityAlignment
A0A438D522 Reverse transcriptase domain-containing protein2.8e-1831.4Show/hide
Query:  EPEFTNGCYTWSSFGENHYCSLIDRFLVTDVCLNKFGAAQFRRLDKVTSDHYPCILSFGDLSWDLCPFRFENSWLKIDSFVGSWLIGGRKMPFRDGFLST
        +P   N  +TWS+  E+  C  +DRFL ++   + F     + L + TSDH+P +L      W   PFRF+N WL+  +F         K  FR+     
Subjt:  EPEFTNGCYTWSSFGENHYCSLIDRFLVTDVCLNKFGAAQFRRLDKVTSDHYPCILSFGDLSWDLCPFRFENSWLKIDSFVGSWLIGGRKMPFRDGFLST

Query:  NVDWCPINESQSIGLEAAFSE---DEVYQAVKSLGTNAILHAKGFGTVWRKWIYGCLSSVNYSIIINGRPRG
           W  +  +   G E    +   ++ Y  V     + +L  KGF   WRKW+ GCLSSV+Y++++NG  +G
Subjt:  NVDWCPINESQSIGLEAAFSE---DEVYQAVKSLGTNAILHAKGFGTVWRKWIYGCLSSVNYSIIINGRPRG

A0A438ESM4 Putative ribonuclease H protein5.9e-1622.09Show/hide
Query:  YWLGLSQSVGAS-----GGILIMRNEPEFTNGCYTWSSFGENHYCSLIDRFLVTDVCLNKFGAAQFRRLDKVTSDHYPCILSFGDLSWDLCPFRFENSWL
        +WL L    G +      G+L    +P   N  +TWS+   +  C  +DRFL +      F  +    L + TSDH P  L    L W   PFRFEN WL
Subjt:  YWLGLSQSVGAS-----GGILIMRNEPEFTNGCYTWSSFGENHYCSLIDRFLVTDVCLNKFGAAQFRRLDKVTSDHYPCILSFGDLSWDLCPFRFENSWL

Query:  KIDSFVGSWLI--------GGRKMP-----------------------FRDGFLSTN-----------------------VDWCPINESQSIGLEAAFSE
            F   + +        GG+ +                         ++G  ++N                       +DW PI+    + L+  F+E
Subjt:  KIDSFVGSWLI--------GGRKMP-----------------------FRDGFLSTN-----------------------VDWCPINESQSIGLEAAFSE

Query:  DEVYQAVKSLG----------------------------------TNA----------------------------------------ILHAKGFGTVWR
        +EV  AV  L                                   TN                                         +L  KGF   WR
Subjt:  DEVYQAVKSLG----------------------------------TNA----------------------------------------ILHAKGFGTVWR

Query:  KWIYGCLSSVNYSIIING---------------------------------------------RPR-------GNFQHRNLALLAKWIWSFLHEDNALCH
         WI GCLSS +++I++NG                                             RP+       G    RN+ALL KW+W F  E + L H
Subjt:  KWIYGCLSSVNYSIIING---------------------------------------------RPR-------GNFQHRNLALLAKWIWSFLHEDNALCH

Query:  KLIVAKYCNSDMFCLW-PRFVQRSSHKSPW
        K+IV+ Y        W    V R SH+ PW
Subjt:  KLIVAKYCNSDMFCLW-PRFVQRSSHKSPW

A0A438H0E5 Reverse transcriptase domain-containing protein6.3e-1829.82Show/hide
Query:  EPEFTNGCYTWSSFGENHYCSLIDRFLVTDVCLNKFGAAQFRRLDKVTSDHYPCILSFGDLSWDLCPFRFENSWLKIDSFVGSWLIGGRKMPFRDGFLST
        +P   N  +TWS+  E+     +DRFL ++   + F  +    L + TSDH+P +L      W   PFRFEN WL+  SF  +  +GG       G ++ 
Subjt:  EPEFTNGCYTWSSFGENHYCSLIDRFLVTDVCLNKFGAAQFRRLDKVTSDHYPCILSFGDLSWDLCPFRFENSWLKIDSFVGSWLIGGRKMPFRDGFLST

Query:  NVDWCPINESQSIGLEAAFSE---DEVYQAVKSLGTNAILHAKGFGTVWRKWIYGCLSSVNYSIIINGRPR
         +    +NE +  G E    +   ++ Y  V     + +L  KGF   WRKW+   LS+V++++++NG  +
Subjt:  NVDWCPINESQSIGLEAAFSE---DEVYQAVKSLGTNAILHAKGFGTVWRKWIYGCLSSVNYSIIINGRPR

A0A438JDC8 Reverse transcriptase domain-containing protein6.1e-1330.17Show/hide
Query:  GCYTWSSFGENHYCSLIDRFLVTDVCLNKFGAAQFRRLDKVTSDHYPCILSFGDLSWDLCPFRFENSWLKIDSF---VGSWLIGGRKMPFRDGFLSTNVD
        G +TW     N   S IDRFL+++   + F  A    L +  SDH P +L  G +     PFRFEN WLK + F   +  W  G +         S N  
Subjt:  GCYTWSSFGENHYCSLIDRFLVTDVCLNKFGAAQFRRLDKVTSDHYPCILSFGDLSWDLCPFRFENSWLKIDSF---VGSWLIGGRKMPFRDGFLSTNVD

Query:  WC----------PINESQSIGLEAAFSEDEVYQAVKSLGTNAILHAKGFGTVWRKWIYGCLSSVNYSIIINGRPRGNFQ
        +            + + + I L        +Y+ +  +  N+ +   GFG  W  WI  CLS+V++S+ +NG P G FQ
Subjt:  WC----------PINESQSIGLEAAFSEDEVYQAVKSLGTNAILHAKGFGTVWRKWIYGCLSSVNYSIIINGRPRGNFQ

A5C8Q9 Uncharacterized protein3.4e-1932.56Show/hide
Query:  EPEFTNGCYTWSSFGENHYCSLIDRFLVTDVCLNKFGAAQFRRLDKVTSDHYPCILSFGDLSWDLCPFRFENSWLKIDSF---VGSWLIGGRKMPFRDGF
        +P   N  +TWS+  E+  C  +DRFL ++     F       L + TSDH+P ++      W   PFRFEN WL+  +F     +W  G +     D  
Subjt:  EPEFTNGCYTWSSFGENHYCSLIDRFLVTDVCLNKFGAAQFRRLDKVTSDHYPCILSFGDLSWDLCPFRFENSWLKIDSF---VGSWLIGGRKMPFRDGF

Query:  LSTNVDWCPINESQSIGLEAAFSEDEVYQAVKSLGTNAILHAKGFGTVWRKWIYGCLSSVNYSIIINGRPRG
        L  N        S   G+      ++ Y   K    +  L  KGF   WRKW+ GCLSSV+Y+I++NG  +G
Subjt:  LSTNVDWCPINESQSIGLEAAFSEDEVYQAVKSLGTNAILHAKGFGTVWRKWIYGCLSSVNYSIIINGRPRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGGTGCTCGATGAAGGCTCATCAAATCTATTTGGAGTTCTTCTCATATTGGTTGGGCCTCTCTCAATCTGTGGGCGCTTCTGGAGGCATTCTTATCATGCGGAA
TGAACCCGAGTTCACAAATGGATGCTACACTTGGTCTAGTTTTGGGGAGAATCATTATTGCTCTTTAATAGATAGATTTCTGGTGACAGATGTTTGTCTCAACAAATTTG
GTGCAGCTCAATTTCGCCGTCTTGACAAGGTCACATCAGACCATTACCCTTGCATTCTCTCCTTTGGAGATCTCTCTTGGGACCTGTGTCCCTTTAGATTCGAGAACTCT
TGGCTGAAAATTGATTCTTTTGTGGGATCATGGTTGATTGGTGGTCGCAAAATGCCATTCAGGGATGGATTCCTCTCGACTAATGTTGATTGGTGTCCAATTAATGAATC
ACAGTCGATAGGCTTGGAGGCCGCTTTTTCTGAAGATGAGGTGTATCAGGCTGTGAAATCGTTAGGCACAAATGCAATTCTTCATGCCAAGGGTTTTGGAACAGTATGGA
GGAAATGGATTTATGGTTGCCTTTCTAGTGTTAATTACTCTATTATTATCAACGGAAGACCAAGAGGTAACTTTCAGCATCGCAATCTAGCTCTGTTAGCAAAATGGATT
TGGAGCTTCTTACATGAGGATAATGCTCTTTGTCATAAGCTAATTGTAGCTAAGTACTGCAACTCTGATATGTTTTGTCTGTGGCCTAGATTTGTTCAAAGAAGCTCTCA
CAAATCCCCTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGGTGCTCGATGAAGGCTCATCAAATCTATTTGGAGTTCTTCTCATATTGGTTGGGCCTCTCTCAATCTGTGGGCGCTTCTGGAGGCATTCTTATCATGCGGAA
TGAACCCGAGTTCACAAATGGATGCTACACTTGGTCTAGTTTTGGGGAGAATCATTATTGCTCTTTAATAGATAGATTTCTGGTGACAGATGTTTGTCTCAACAAATTTG
GTGCAGCTCAATTTCGCCGTCTTGACAAGGTCACATCAGACCATTACCCTTGCATTCTCTCCTTTGGAGATCTCTCTTGGGACCTGTGTCCCTTTAGATTCGAGAACTCT
TGGCTGAAAATTGATTCTTTTGTGGGATCATGGTTGATTGGTGGTCGCAAAATGCCATTCAGGGATGGATTCCTCTCGACTAATGTTGATTGGTGTCCAATTAATGAATC
ACAGTCGATAGGCTTGGAGGCCGCTTTTTCTGAAGATGAGGTGTATCAGGCTGTGAAATCGTTAGGCACAAATGCAATTCTTCATGCCAAGGGTTTTGGAACAGTATGGA
GGAAATGGATTTATGGTTGCCTTTCTAGTGTTAATTACTCTATTATTATCAACGGAAGACCAAGAGGTAACTTTCAGCATCGCAATCTAGCTCTGTTAGCAAAATGGATT
TGGAGCTTCTTACATGAGGATAATGCTCTTTGTCATAAGCTAATTGTAGCTAAGTACTGCAACTCTGATATGTTTTGTCTGTGGCCTAGATTTGTTCAAAGAAGCTCTCA
CAAATCCCCTTGGTGA
Protein sequenceShow/hide protein sequence
MERCSMKAHQIYLEFFSYWLGLSQSVGASGGILIMRNEPEFTNGCYTWSSFGENHYCSLIDRFLVTDVCLNKFGAAQFRRLDKVTSDHYPCILSFGDLSWDLCPFRFENS
WLKIDSFVGSWLIGGRKMPFRDGFLSTNVDWCPINESQSIGLEAAFSEDEVYQAVKSLGTNAILHAKGFGTVWRKWIYGCLSSVNYSIIINGRPRGNFQHRNLALLAKWI
WSFLHEDNALCHKLIVAKYCNSDMFCLWPRFVQRSSHKSPW