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Lag0025769 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025769
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:19917757..19918976
RNA-Seq ExpressionLag0025769
SyntenyLag0025769
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2606380.1 hypothetical protein PVAP13_4NG174311 [Panicum virgatum]6.6e-1750Show/hide
Query:  MKTLSWNVRGLGNPRTVRALRHIIDGENPQILFIMETKSDENRCNKLRKSLNFDNSWCVPSNDKSGGLLLLWNYEVEIKIKSWSEGHIDTHCSING
        M+TLSWN RG+GNP  VR L  +     P +LFIMET+ D+ R   LR SL FDNS+ V S+ +SGGL L WN +V + +K +S  HID+  S +G
Subjt:  MKTLSWNVRGLGNPRTVRALRHIIDGENPQILFIMETKSDENRCNKLRKSLNFDNSWCVPSNDKSGGLLLLWNYEVEIKIKSWSEGHIDTHCSING

TVU49586.1 hypothetical protein EJB05_00900, partial [Eragrostis curvula]1.1e-1652.22Show/hide
Query:  MKTLSWNVRGLGNPRTVRALRHIIDGENPQILFIMETKSDENRCNKLRKSLNFDNSWCVPSNDKSGGLLLLWNYEVEIKIKSWSEGHIDT
        MKTLSWN  G+GNP TV+ LR +     P +LFIMET+ D+ R   LR +L FDNS+ V S+ +SGGL L W  +V + IK +S  HIDT
Subjt:  MKTLSWNVRGLGNPRTVRALRHIIDGENPQILFIMETKSDENRCNKLRKSLNFDNSWCVPSNDKSGGLLLLWNYEVEIKIKSWSEGHIDT

XP_024038343.1 uncharacterized protein LOC112097373 [Citrus clementina]1.1e-1643.43Show/hide
Query:  MKTLSWNVRGLGNPRTVRALRHIIDGENPQILFIMETKSDENRCNKLRKSLNFDNSWCVPSNDKSGGLLLLWNYEVEIKIKSWSEGHIDTHCSINGWKV
        MK LSWN+RGLGNPR   AL+ I+    P ++F+ ETK    + N++ + LN++N + V S  K GGL LLWN E +++IKS+++ HID    +   K+
Subjt:  MKTLSWNVRGLGNPRTVRALRHIIDGENPQILFIMETKSDENRCNKLRKSLNFDNSWCVPSNDKSGGLLLLWNYEVEIKIKSWSEGHIDTHCSINGWKV

XP_024043257.1 uncharacterized protein LOC112099952 [Citrus clementina]1.1e-1650.51Show/hide
Query:  MKTLSWNVRGLGNPRTVRALRHIIDGENPQILFIMETKSDENRCNKLRKSLNFDNSWCVPSNDKSGGLLLLWNYEVEIKIKSWSEGHIDTHCS-INGWK
        MK +SWNVRGLGN RT  A++ I+    P ILF+ ETK  + + + + KSL FDN + V  N   GGL LLWNYE +I I S+S  HID   S +NG K
Subjt:  MKTLSWNVRGLGNPRTVRALRHIIDGENPQILFIMETKSDENRCNKLRKSLNFDNSWCVPSNDKSGGLLLLWNYEVEIKIKSWSEGHIDTHCS-INGWK

XP_042974662.1 uncharacterized protein LOC122306298 [Carya illinoinensis]7.8e-1851.61Show/hide
Query:  MKTLSWNVRGLGNPRTVRALRHIIDGENPQILFIMETKSDENRCNKLRKSLNFDNSWCVPSNDKSGGLLLLWNYEVEIKIKSWSEGHIDTHCS
        MKT+SWN RGLGNPR VR LR ++  E+P++LF+METK    +  ++R S+ F   + VPS  +SGGL LLW  EV + IKS+S  HID   S
Subjt:  MKTLSWNVRGLGNPRTVRALRHIIDGENPQILFIMETKSDENRCNKLRKSLNFDNSWCVPSNDKSGGLLLLWNYEVEIKIKSWSEGHIDTHCS

TrEMBL top hitse value%identityAlignment
A0A2N9G1F9 Uncharacterized protein1.8e-2039.73Show/hide
Query:  PSEVKGKGQAHQEKDILTDRDLEENNRMKNENQVVMI---------KKEAASSDAMKTLSWNVRGLGNPRTVRALRHIIDGENPQILFIMETKSDENRCN
        P     K  A ++K IL D  +      K  N+ +++         KK  A  + M  LSWN +GLGNP  VRAL H++  + P++LF+METK D  R  
Subjt:  PSEVKGKGQAHQEKDILTDRDLEENNRMKNENQVVMI---------KKEAASSDAMKTLSWNVRGLGNPRTVRALRHIIDGENPQILFIMETKSDENRCN

Query:  KLRKSLNFDNSWCVPSNDKSGGLLLLWNYEVEIKIKSWSEGHIDTH
         +R  L FDN++ VPS  +SGGL LLW  + E+ I+++S+ HID H
Subjt:  KLRKSLNFDNSWCVPSNDKSGGLLLLWNYEVEIKIKSWSEGHIDTH

A0A2N9G8I6 Reverse transcriptase domain-containing protein1.8e-2039.73Show/hide
Query:  PSEVKGKGQAHQEKDILTDRDLEENNRMKNENQVVMI---------KKEAASSDAMKTLSWNVRGLGNPRTVRALRHIIDGENPQILFIMETKSDENRCN
        P     K  A ++K IL D  +      K  N+ +++         KK  A  + M  LSWN +GLGNP  VRAL H++  + P++LF+METK D  R  
Subjt:  PSEVKGKGQAHQEKDILTDRDLEENNRMKNENQVVMI---------KKEAASSDAMKTLSWNVRGLGNPRTVRALRHIIDGENPQILFIMETKSDENRCN

Query:  KLRKSLNFDNSWCVPSNDKSGGLLLLWNYEVEIKIKSWSEGHIDTH
         +R  L FDN++ VPS  +SGGL LLW  + E+ I+++S+ HID H
Subjt:  KLRKSLNFDNSWCVPSNDKSGGLLLLWNYEVEIKIKSWSEGHIDTH

A0A2N9HE04 Reverse transcriptase domain-containing protein2.4e-1735Show/hide
Query:  PEKESVEAGPSEVKGKGQAHQEKDILTDRDLEENNR--MKNENQVVMIKKEAASSDAMKTLSWNVRGLGNPRTVRALRHIIDGENPQILFIMETKSDENR
        P+K S++  P E     +A  +K+ L+ +D  +     +    +    K++ A+  +MK LSWN +GLGNP TV +L  ++  ++PQ+LF+METK  + +
Subjt:  PEKESVEAGPSEVKGKGQAHQEKDILTDRDLEENNR--MKNENQVVMIKKEAASSDAMKTLSWNVRGLGNPRTVRALRHIIDGENPQILFIMETKSDENR

Query:  CNKLRKSLNFDNSWCVPSNDKSGGLLLLWNYEVEIKIKSWSEGHIDTHC---SINGWKVI
           +R  L F N++ VPS  +S GL LLW  EV +++K+++  HID+H    + +GW++I
Subjt:  CNKLRKSLNFDNSWCVPSNDKSGGLLLLWNYEVEIKIKSWSEGHIDTHC---SINGWKVI

A0A2N9IBI9 Reverse transcriptase domain-containing protein1.8e-2039.73Show/hide
Query:  PSEVKGKGQAHQEKDILTDRDLEENNRMKNENQVVMI---------KKEAASSDAMKTLSWNVRGLGNPRTVRALRHIIDGENPQILFIMETKSDENRCN
        P     K  A ++K IL D  +      K  N+ +++         KK  A  + M  LSWN +GLGNP  VRAL H++  + P++LF+METK D  R  
Subjt:  PSEVKGKGQAHQEKDILTDRDLEENNRMKNENQVVMI---------KKEAASSDAMKTLSWNVRGLGNPRTVRALRHIIDGENPQILFIMETKSDENRCN

Query:  KLRKSLNFDNSWCVPSNDKSGGLLLLWNYEVEIKIKSWSEGHIDTH
         +R  L FDN++ VPS  +SGGL LLW  + E+ I+++S+ HID H
Subjt:  KLRKSLNFDNSWCVPSNDKSGGLLLLWNYEVEIKIKSWSEGHIDTH

A0A2N9IJF6 Uncharacterized protein2.4e-1735Show/hide
Query:  PEKESVEAGPSEVKGKGQAHQEKDILTDRDLEENNR--MKNENQVVMIKKEAASSDAMKTLSWNVRGLGNPRTVRALRHIIDGENPQILFIMETKSDENR
        P+K S++  P E     +A  +K+ L+ +D  +     +    +    K++ A+  +MK LSWN +GLGNP TV +L  ++  ++PQ+LF+METK  + +
Subjt:  PEKESVEAGPSEVKGKGQAHQEKDILTDRDLEENNR--MKNENQVVMIKKEAASSDAMKTLSWNVRGLGNPRTVRALRHIIDGENPQILFIMETKSDENR

Query:  CNKLRKSLNFDNSWCVPSNDKSGGLLLLWNYEVEIKIKSWSEGHIDTHC---SINGWKVI
           +R  L F N++ VPS  +S GL LLW  EV +++K+++  HID+H    + +GW++I
Subjt:  CNKLRKSLNFDNSWCVPSNDKSGGLLLLWNYEVEIKIKSWSEGHIDTHC---SINGWKVI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATTCGAATCCTTCAGAGGAAAAGGTCGGGGAAGAGGAGTCGGAAATAGAGGCTTGAATGAAGTCACGTACGATCAAGAAGGAACTGCAGAAGCACACGAAAATGG
GCATGAAACGCCGGCCAACCAGCCGGAAAAACCTCCAGAGAAAGAATCGGTTGAAGCTGGGCCATCAGAAGTCAAAGGAAAAGGCCAAGCCCATCAAGAAAAAGACATTC
TGACCGACAGAGACCTAGAGGAAAACAATAGAATGAAGAATGAAAATCAGGTGGTTATGATCAAGAAAGAAGCTGCCTCGTCGGATGCCATGAAAACCTTAAGTTGGAAC
GTTCGAGGTTTGGGGAATCCTCGAACGGTTCGGGCTCTCCGTCATATCATAGATGGAGAAAACCCCCAAATTTTGTTTATTATGGAAACAAAGAGTGATGAAAACAGATG
CAACAAACTGAGGAAAAGTCTCAATTTTGACAACAGCTGGTGTGTGCCTAGCAATGATAAAAGTGGGGGGTTGCTGCTCTTGTGGAATTATGAGGTGGAGATTAAAATTA
AGTCATGGTCTGAAGGTCACATCGATACCCACTGCTCGATTAATGGTTGGAAGGTTATATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGATTCGAATCCTTCAGAGGAAAAGGTCGGGGAAGAGGAGTCGGAAATAGAGGCTTGAATGAAGTCACGTACGATCAAGAAGGAACTGCAGAAGCACACGAAAATGG
GCATGAAACGCCGGCCAACCAGCCGGAAAAACCTCCAGAGAAAGAATCGGTTGAAGCTGGGCCATCAGAAGTCAAAGGAAAAGGCCAAGCCCATCAAGAAAAAGACATTC
TGACCGACAGAGACCTAGAGGAAAACAATAGAATGAAGAATGAAAATCAGGTGGTTATGATCAAGAAAGAAGCTGCCTCGTCGGATGCCATGAAAACCTTAAGTTGGAAC
GTTCGAGGTTTGGGGAATCCTCGAACGGTTCGGGCTCTCCGTCATATCATAGATGGAGAAAACCCCCAAATTTTGTTTATTATGGAAACAAAGAGTGATGAAAACAGATG
CAACAAACTGAGGAAAAGTCTCAATTTTGACAACAGCTGGTGTGTGCCTAGCAATGATAAAAGTGGGGGGTTGCTGCTCTTGTGGAATTATGAGGTGGAGATTAAAATTA
AGTCATGGTCTGAAGGTCACATCGATACCCACTGCTCGATTAATGGTTGGAAGGTTATATGA
Protein sequenceShow/hide protein sequence
MRFESFRGKGRGRGVGNRGLNEVTYDQEGTAEAHENGHETPANQPEKPPEKESVEAGPSEVKGKGQAHQEKDILTDRDLEENNRMKNENQVVMIKKEAASSDAMKTLSWN
VRGLGNPRTVRALRHIIDGENPQILFIMETKSDENRCNKLRKSLNFDNSWCVPSNDKSGGLLLLWNYEVEIKIKSWSEGHIDTHCSINGWKVI