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Lag0025787 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025787
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr10:20404016..20404782
RNA-Seq ExpressionLag0025787
SyntenyLag0025787
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR036875 - Zinc finger, CCHC-type superfamily
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG73753.1 hypothetical protein EZV62_002332 [Acer yangbiense]4.0e-1536.43Show/hide
Query:  GKALVMEDEELNVKIQDLKHIAYASFWIHYLDIPRVCINRKWAEALGNTADDFKRVDLEEEEEEGKDSMRIRVKIDVKKPLRRGIVIKIGSKVEEEWIEM
        GK+L+  ++ L V          A FW+   DIP +C+NR+ A+ +     +   + LE +E  GK  MR++V++D+ KPL+R +  K+G   E   + +
Subjt:  GKALVMEDEELNVKIQDLKHIAYASFWIHYLDIPRVCINRKWAEALGNTADDFKRVDLEEEEEEGKDSMRIRVKIDVKKPLRRGIVIKIGSKVEEEWIEM

Query:  RNEKLSDFCYGCGRLGHLARECSDQEALK
        R E+L DF Y CGR+GH+ +EC D++A K
Subjt:  RNEKLSDFCYGCGRLGHLARECSDQEALK

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]3.4e-1439.67Show/hide
Query:  KALVMEDEELNVKIQDLKHIAYASFWIHYLDIPRVCINRKWAEALGNTADDFKRVDLEEEEEEGKDSMRIRVKIDVKKPLRRGIVIKIGSKVEEEWIEMR
        KAL++  +  + K          +FWIH  D+P   +N+  A  LGN   +F  VD  E+      S+RIRV ID+ KPLRRGI I I   +   WI ++
Subjt:  KALVMEDEELNVKIQDLKHIAYASFWIHYLDIPRVCINRKWAEALGNTADDFKRVDLEEEEEEGKDSMRIRVKIDVKKPLRRGIVIKIGSKVEEEWIEMR

Query:  NEKLSDFCYGCGRLGHLAREC
         E+L DFCY CG +GH + +C
Subjt:  NEKLSDFCYGCGRLGHLAREC

XP_028071384.1 uncharacterized protein LOC114273772 [Camellia sinensis]2.6e-1436.97Show/hide
Query:  LVMEDEELNVKIQDLKHIAYASFWIHYLDIPRVCINRKWAEALGNTADDFKRVDLEEEEEEGKDSMRIRVKIDVKKPLRRGIVIKIGSKVEEEWIEMRNE
        L++ + + NV+  D++ + +  FW+H  ++P + +N+K  + +GN    F  +D E+       +M IRV +DV+KPLRRG+ + + S VE  W++ + E
Subjt:  LVMEDEELNVKIQDLKHIAYASFWIHYLDIPRVCINRKWAEALGNTADDFKRVDLEEEEEEGKDSMRIRVKIDVKKPLRRGIVIKIGSKVEEEWIEMRNE

Query:  KLSDFCYGCGRLGHLAREC
        +L  +CY CGRLGH  REC
Subjt:  KLSDFCYGCGRLGHLAREC

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]1.4e-1538.52Show/hide
Query:  LVMEDEELNVKIQDLKHIAYASFWIHYLDIPRVCINRKWAEALGNTADDFKRVDLEEEEEEGKDSMRIRVKIDVKKPLRRGIVIKIGSKVEEEWIEMRNE
        L++ + + NV+  D++ +    FW+H  ++P V +N+K  E +GN    F  +D E+       +MRIRV +DV+KPLRRG+ + + S  E  W++ + E
Subjt:  LVMEDEELNVKIQDLKHIAYASFWIHYLDIPRVCINRKWAEALGNTADDFKRVDLEEEEEEGKDSMRIRVKIDVKKPLRRGIVIKIGSKVEEEWIEMRNE

Query:  KLSDFCYGCGRLGHLARECSDQ
        +L  +CY CGRLGH  REC D+
Subjt:  KLSDFCYGCGRLGHLARECSDQ

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]1.5e-1436.89Show/hide
Query:  LVMEDEELNVKIQDLKHIAYASFWIHYLDIPRVCINRKWAEALGNTADDFKRVDLEEEEEEGKDSMRIRVKIDVKKPLRRGIVIKIGSKVEEEWIEMRNE
        L++ + + NV+  D++ +    FW+H  ++P V +N++  + +GN    F  +D E+       +MRIRV IDV+KPLRRG+ + + S  +  W++ + E
Subjt:  LVMEDEELNVKIQDLKHIAYASFWIHYLDIPRVCINRKWAEALGNTADDFKRVDLEEEEEEGKDSMRIRVKIDVKKPLRRGIVIKIGSKVEEEWIEMRNE

Query:  KLSDFCYGCGRLGHLARECSDQ
        +L  +CY CGRLGH  REC D+
Subjt:  KLSDFCYGCGRLGHLARECSDQ

TrEMBL top hitse value%identityAlignment
A0A5C7HB59 Uncharacterized protein1.6e-1441.51Show/hide
Query:  ASFWIHYLDIPRVCINRKWAEALGNTADDFKRVDLEEEEEEGKDSMRIRVKIDVKKPLRRGIVIKIGSKVEEEWIEMRNEKLSDFCYGCGRLGHLARECS
        A FW+   DIP +C+NR+ A+ L     +   +  E  E  GK  M ++V+ID+ KPL+R + +KIG   E   + ++ EKL DFCY CGR+G+  +EC 
Subjt:  ASFWIHYLDIPRVCINRKWAEALGNTADDFKRVDLEEEEEEGKDSMRIRVKIDVKKPLRRGIVIKIGSKVEEEWIEMRNEKLSDFCYGCGRLGHLARECS

Query:  DQEALK
        D+EA K
Subjt:  DQEALK

A0A5C7HJ97 CCHC-type domain-containing protein2.2e-1440.38Show/hide
Query:  ASFWIHYLDIPRVCINRKWAEALGNTADDFKRVDLEEEEEEGKDSMRIRVKIDVKKPLRRGIVIKIGSKVEEEWIEMRNEKLSDFCYGCGRLGHLARECS
        A FW+   DIP +C+NR+ A+ L     +   + LE  E  GK  MR++V+ID+ KPL+R + +K+G   E   + ++ E+L +FCY CG++GH  +EC 
Subjt:  ASFWIHYLDIPRVCINRKWAEALGNTADDFKRVDLEEEEEEGKDSMRIRVKIDVKKPLRRGIVIKIGSKVEEEWIEMRNEKLSDFCYGCGRLGHLARECS

Query:  DQEA
        D+EA
Subjt:  DQEA

A0A5C7IWZ8 Uncharacterized protein1.9e-1536.43Show/hide
Query:  GKALVMEDEELNVKIQDLKHIAYASFWIHYLDIPRVCINRKWAEALGNTADDFKRVDLEEEEEEGKDSMRIRVKIDVKKPLRRGIVIKIGSKVEEEWIEM
        GK+L+  ++ L V          A FW+   DIP +C+NR+ A+ +     +   + LE +E  GK  MR++V++D+ KPL+R +  K+G   E   + +
Subjt:  GKALVMEDEELNVKIQDLKHIAYASFWIHYLDIPRVCINRKWAEALGNTADDFKRVDLEEEEEEGKDSMRIRVKIDVKKPLRRGIVIKIGSKVEEEWIEM

Query:  RNEKLSDFCYGCGRLGHLARECSDQEALK
        R E+L DF Y CGR+GH+ +EC D++A K
Subjt:  RNEKLSDFCYGCGRLGHLARECSDQEALK

A0A6J1D765 uncharacterized protein LOC1110179022.8e-1445.37Show/hide
Query:  YASFWIHYLDIPRVCINRKWAEALGNTADDFKRVDLEEEEEEGKDS-----MRIRVKIDVKKPLRRGIVIKIGSKVEEEWIEMRNEKLSDFCYGCGRLGH
        + +FWI   +IP  CI+ + A  LG      K  D+EE E +G D      +R+RVKIDV KPLRRGI +K  S  ++ W  +R EKL DFCY CG++GH
Subjt:  YASFWIHYLDIPRVCINRKWAEALGNTADDFKRVDLEEEEEEGKDS-----MRIRVKIDVKKPLRRGIVIKIGSKVEEEWIEMRNEKLSDFCYGCGRLGH

Query:  LARECSDQ
          REC  +
Subjt:  LARECSDQ

A0A6J1DU55 uncharacterized protein LOC1110231351.6e-1439.67Show/hide
Query:  KALVMEDEELNVKIQDLKHIAYASFWIHYLDIPRVCINRKWAEALGNTADDFKRVDLEEEEEEGKDSMRIRVKIDVKKPLRRGIVIKIGSKVEEEWIEMR
        KAL++  +  + K          +FWIH  D+P   +N+  A  LGN   +F  VD  E+      S+RIRV ID+ KPLRRGI I I   +   WI ++
Subjt:  KALVMEDEELNVKIQDLKHIAYASFWIHYLDIPRVCINRKWAEALGNTADDFKRVDLEEEEEEGKDSMRIRVKIDVKKPLRRGIVIKIGSKVEEEWIEMR

Query:  NEKLSDFCYGCGRLGHLAREC
         E+L DFCY CG +GH + +C
Subjt:  NEKLSDFCYGCGRLGHLAREC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAGGACAACAAAAGGAAGGAGAAACAAGCAAAGGAACCTCAAATGCATCTCAGCTAGAGGTAACAGTCTTCAGTAAGCAGCTTGGAAACCTGAAACTCACTGA
TGATGAAAAAGGAAAAGCCTTGGTCATGGAAGACGAAGAACTAAATGTCAAGATTCAAGACCTGAAACATATAGCGTATGCCTCATTTTGGATCCACTACCTGGATATCC
CAAGAGTTTGTATAAACAGGAAATGGGCGGAAGCATTAGGCAACACAGCAGACGACTTCAAAAGGGTAGATTTAGAAGAGGAAGAGGAAGAAGGGAAAGACTCAATGAGA
ATCAGAGTGAAGATAGACGTCAAAAAGCCTCTAAGAAGGGGGATAGTGATTAAAATAGGAAGCAAGGTAGAAGAAGAATGGATAGAAATGAGGAATGAAAAACTGTCGGA
TTTCTGTTATGGTTGCGGTAGATTGGGCCATTTAGCAAGAGAATGTAGCGATCAAGAGGCCCTCAAGAATGATAAACTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAAGGACAACAAAAGGAAGGAGAAACAAGCAAAGGAACCTCAAATGCATCTCAGCTAGAGGTAACAGTCTTCAGTAAGCAGCTTGGAAACCTGAAACTCACTGA
TGATGAAAAAGGAAAAGCCTTGGTCATGGAAGACGAAGAACTAAATGTCAAGATTCAAGACCTGAAACATATAGCGTATGCCTCATTTTGGATCCACTACCTGGATATCC
CAAGAGTTTGTATAAACAGGAAATGGGCGGAAGCATTAGGCAACACAGCAGACGACTTCAAAAGGGTAGATTTAGAAGAGGAAGAGGAAGAAGGGAAAGACTCAATGAGA
ATCAGAGTGAAGATAGACGTCAAAAAGCCTCTAAGAAGGGGGATAGTGATTAAAATAGGAAGCAAGGTAGAAGAAGAATGGATAGAAATGAGGAATGAAAAACTGTCGGA
TTTCTGTTATGGTTGCGGTAGATTGGGCCATTTAGCAAGAGAATGTAGCGATCAAGAGGCCCTCAAGAATGATAAACTCTAA
Protein sequenceShow/hide protein sequence
MDEGQQKEGETSKGTSNASQLEVTVFSKQLGNLKLTDDEKGKALVMEDEELNVKIQDLKHIAYASFWIHYLDIPRVCINRKWAEALGNTADDFKRVDLEEEEEEGKDSMR
IRVKIDVKKPLRRGIVIKIGSKVEEEWIEMRNEKLSDFCYGCGRLGHLARECSDQEALKNDKL