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Lag0025791 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025791
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZf-CCHC domain-containing protein/UBN2 domain-containing protein
Genome locationchr10:20653156..20653565
RNA-Seq ExpressionLag0025791
SyntenyLag0025791
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046765.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]1.2e-3077.66Show/hide
Query:  LIVDSKDVDALDEDDVAYLSRKYKNFIKRKKQFKKHFSNPKEPKGEKSKKDEVICYECKKPGHIRTDCPLLKSSKKFKKKAKKATWDDSDEAKA
        L VD +D D LD+DD+ YLSRKYKNFIKRKK FKKH S  KE KGEKSKKDEVICYECKK  HIRTDCPLLKSSKK KKKA KATWDDS E+++
Subjt:  LIVDSKDVDALDEDDVAYLSRKYKNFIKRKKQFKKHFSNPKEPKGEKSKKDEVICYECKKPGHIRTDCPLLKSSKKFKKKAKKATWDDSDEAKA

TYK29684.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]7.7e-3075.53Show/hide
Query:  LIVDSKDVDALDEDDVAYLSRKYKNFIKRKKQFKKHFSNPKEPKGEKSKKDEVICYECKKPGHIRTDCPLLKSSKKFKKKAKKATWDDSDEAKA
        L VD +D D LD+DD+ YLSRKYKNFIK+KK FKKH S  KE KGEKSKKDEVICYECKK  HIRTDCPLLKSSKK KKK  KATWDDS E+++
Subjt:  LIVDSKDVDALDEDDVAYLSRKYKNFIKRKKQFKKHFSNPKEPKGEKSKKDEVICYECKKPGHIRTDCPLLKSSKKFKKKAKKATWDDSDEAKA

XP_022157467.1 uncharacterized protein LOC111024159 [Momordica charantia]6.1e-3588.04Show/hide
Query:  LIVDSKDVDALDEDDVAYLSRKYKNFIKRKKQFKKHFSNPKEPKGEKSKKDEVICYECKKPGHIRTDCPLLKSSKKFKKKAKKATWDDSDEA
        L VDSK  +ALDEDDVAYLSRKYKNFIKRKKQFKK+FSN KE KGEKSKKDEVICY+CKKPGHIRTDCPLLKSSKK KKKA KATWDDSDE+
Subjt:  LIVDSKDVDALDEDDVAYLSRKYKNFIKRKKQFKKHFSNPKEPKGEKSKKDEVICYECKKPGHIRTDCPLLKSSKKFKKKAKKATWDDSDEA

XP_022158792.1 uncharacterized protein LOC111025259 [Momordica charantia]2.2e-3283.16Show/hide
Query:  MDELIVDSKDVDALDEDDVAYLSRKYKNFIKRKKQFKKHFSNPKEPKGEKSKKDEVICYECKKPGHIRTDCPLLKSSKKFKKKAKKATWDDSDEA
        MDELI +    +ALDEDDVAYLSRKYKNFIKRKKQFKK+FSN KE K E SKKDEVICYECKKPGHIRTDCP LKSSKK KKKA KATWDDSDE+
Subjt:  MDELIVDSKDVDALDEDDVAYLSRKYKNFIKRKKQFKKHFSNPKEPKGEKSKKDEVICYECKKPGHIRTDCPLLKSSKKFKKKAKKATWDDSDEA

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]1.4e-3178.72Show/hide
Query:  LIVDSKDVDALDEDDVAYLSRKYKNFIKRKKQFKKHFSNPKEPKGEKSKKDEVICYECKKPGHIRTDCPLLKSSKKFKKKAKKATWDDSDEAKA
        L VD +D D LDEDD+AY SRKYKNFIKRKK FKKH S  KE KGEKSKKDEVICYECK+ GHIRTDCPLLKSSKK KKKA KATWDDS E+++
Subjt:  LIVDSKDVDALDEDDVAYLSRKYKNFIKRKKQFKKHFSNPKEPKGEKSKKDEVICYECKKPGHIRTDCPLLKSSKKFKKKAKKATWDDSDEAKA

TrEMBL top hitse value%identityAlignment
A0A5A7SRY3 Zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-containing protein2.9e-2768.04Show/hide
Query:  MDELIVDSKDVDALDEDDVAYLSRKYKNFIKRKKQFKKHFSNPKEPKGEKSKKDEVICYECKKPGHIRTDCPLLKSSKKFKKKAKKATWDDSDEAKA
        ++ + ++ +D D LDEDD+AY SRKY+NFIKRKK FKKH S  KE KGEK+KKDEVI YECKK G+IRTDCP LKSSKK KKKA KATWDDS ++++
Subjt:  MDELIVDSKDVDALDEDDVAYLSRKYKNFIKRKKQFKKHFSNPKEPKGEKSKKDEVICYECKKPGHIRTDCPLLKSSKKFKKKAKKATWDDSDEAKA

A0A5A7TZF4 Zf-CCHC domain-containing protein/UBN2 domain-containing protein5.7e-3177.66Show/hide
Query:  LIVDSKDVDALDEDDVAYLSRKYKNFIKRKKQFKKHFSNPKEPKGEKSKKDEVICYECKKPGHIRTDCPLLKSSKKFKKKAKKATWDDSDEAKA
        L VD +D D LD+DD+ YLSRKYKNFIKRKK FKKH S  KE KGEKSKKDEVICYECKK  HIRTDCPLLKSSKK KKKA KATWDDS E+++
Subjt:  LIVDSKDVDALDEDDVAYLSRKYKNFIKRKKQFKKHFSNPKEPKGEKSKKDEVICYECKKPGHIRTDCPLLKSSKKFKKKAKKATWDDSDEAKA

A0A5D3E1G2 Zf-CCHC domain-containing protein/UBN2 domain-containing protein3.7e-3075.53Show/hide
Query:  LIVDSKDVDALDEDDVAYLSRKYKNFIKRKKQFKKHFSNPKEPKGEKSKKDEVICYECKKPGHIRTDCPLLKSSKKFKKKAKKATWDDSDEAKA
        L VD +D D LD+DD+ YLSRKYKNFIK+KK FKKH S  KE KGEKSKKDEVICYECKK  HIRTDCPLLKSSKK KKK  KATWDDS E+++
Subjt:  LIVDSKDVDALDEDDVAYLSRKYKNFIKRKKQFKKHFSNPKEPKGEKSKKDEVICYECKKPGHIRTDCPLLKSSKKFKKKAKKATWDDSDEAKA

A0A6J1DUJ5 uncharacterized protein LOC1110241592.9e-3588.04Show/hide
Query:  LIVDSKDVDALDEDDVAYLSRKYKNFIKRKKQFKKHFSNPKEPKGEKSKKDEVICYECKKPGHIRTDCPLLKSSKKFKKKAKKATWDDSDEA
        L VDSK  +ALDEDDVAYLSRKYKNFIKRKKQFKK+FSN KE KGEKSKKDEVICY+CKKPGHIRTDCPLLKSSKK KKKA KATWDDSDE+
Subjt:  LIVDSKDVDALDEDDVAYLSRKYKNFIKRKKQFKKHFSNPKEPKGEKSKKDEVICYECKKPGHIRTDCPLLKSSKKFKKKAKKATWDDSDEA

A0A6J1DY46 uncharacterized protein LOC1110252591.0e-3283.16Show/hide
Query:  MDELIVDSKDVDALDEDDVAYLSRKYKNFIKRKKQFKKHFSNPKEPKGEKSKKDEVICYECKKPGHIRTDCPLLKSSKKFKKKAKKATWDDSDEA
        MDELI +    +ALDEDDVAYLSRKYKNFIKRKKQFKK+FSN KE K E SKKDEVICYECKKPGHIRTDCP LKSSKK KKKA KATWDDSDE+
Subjt:  MDELIVDSKDVDALDEDDVAYLSRKYKNFIKRKKQFKKHFSNPKEPKGEKSKKDEVICYECKKPGHIRTDCPLLKSSKKFKKKAKKATWDDSDEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAACTCATCGTTGACTCCAAAGATGTGGATGCTCTTGATGAAGATGACGTTGCCTATCTCTCACGTAAGTATAAAAATTTCATTAAGAGAAAGAAACAATTCAA
GAAGCATTTCTCCAACCCAAAAGAGCCAAAAGGTGAAAAGAGCAAAAAGGATGAGGTTATTTGTTATGAATGCAAGAAACCGGGTCATATTAGAACTGATTGTCCTCTTC
TCAAATCATCCAAGAAATTCAAGAAGAAAGCAAAGAAGGCTACTTGGGATGATAGCGATGAAGCGAAAGCGGGACTGATAATGAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAACTCATCGTTGACTCCAAAGATGTGGATGCTCTTGATGAAGATGACGTTGCCTATCTCTCACGTAAGTATAAAAATTTCATTAAGAGAAAGAAACAATTCAA
GAAGCATTTCTCCAACCCAAAAGAGCCAAAAGGTGAAAAGAGCAAAAAGGATGAGGTTATTTGTTATGAATGCAAGAAACCGGGTCATATTAGAACTGATTGTCCTCTTC
TCAAATCATCCAAGAAATTCAAGAAGAAAGCAAAGAAGGCTACTTGGGATGATAGCGATGAAGCGAAAGCGGGACTGATAATGAAGAAGTGA
Protein sequenceShow/hide protein sequence
MDELIVDSKDVDALDEDDVAYLSRKYKNFIKRKKQFKKHFSNPKEPKGEKSKKDEVICYECKKPGHIRTDCPLLKSSKKFKKKAKKATWDDSDEAKAGLIMKK